RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 PHF14O94880 888 aa8.07□□□□□ -1.12
RNU6-238P-201ENST00000363313 TYW1BQ6NUM6 668 aa8.06□□□□□ -1.12
RNU6-238P-201ENST00000363313 PCDHGA10Q9Y5H3 936 aa8.06□□□□□ -1.12
RNU6-238P-201ENST00000363313 EPAS1Q99814 870 aa8.04□□□□□ -1.12
RNU6-238P-201ENST00000363313 SOWAHBA6NEL2 793 aa8.03□□□□□ -1.12
RNU6-238P-201ENST00000363313 EMILIN3Q9NT22 766 aa8.02□□□□□ -1.13
RNU6-238P-201ENST00000363313 CAMK2BQ13554 666 aa8□□□□□ -1.13
RNU6-238P-201ENST00000363313 COL9A1P20849 921 aa7.99□□□□□ -1.13
RNU6-238P-201ENST00000363313 ZFRQ96KR1 1074 aaKnown RBP7.99□□□□□ -1.13
RNU6-238P-201ENST00000363313 KCNC4Q03721 635 aa7.98□□□□□ -1.13
RNU6-238P-201ENST00000363313 PROX2Q3B8N5 592 aa7.98□□□□□ -1.13
RNU6-238P-201ENST00000363313 C6orf132Q5T0Z8 1188 aa7.98□□□□□ -1.13
RNU6-238P-201ENST00000363313 KIAA1468Q9P260 1216 aa7.98□□□□□ -1.13
RNU6-238P-201ENST00000363313 LAPTM4AQ15012 233 aa7.97□□□□□ -1.13
RNU6-238P-201ENST00000363313 FAM98CQ17RN3 349 aaKnown RBP7.96□□□□□ -1.14
RNU6-238P-201ENST00000363313 TRIM6-TRIM34B2RNG4 842 aa7.95□□□□□ -1.14
RNU6-238P-201ENST00000363313 BCAMP50895 628 aa7.94□□□□□ -1.14
RNU6-238P-201ENST00000363313 TSR3Q9UJK0 312 aaKnown RBP7.94□□□□□ -1.14
RNU6-238P-201ENST00000363313 WBP1LQ9NX94 342 aa7.92□□□□□ -1.14
RNU6-238P-201ENST00000363313 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.92□□□□□ -1.14
RNU6-238P-201ENST00000363313 PACS2Q86VP3 889 aa7.91□□□□□ -1.14
RNU6-238P-201ENST00000363313 LRCH3Q96II8 777 aa7.91□□□□□ -1.14
RNU6-238P-201ENST00000363313 CADPS2Q86UW7 1296 aa7.89□□□□□ -1.15
RNU6-238P-201ENST00000363313 SPDYE16A6NNV3 312 aaPredicted RBP7.88□□□□□ -1.15
RNU6-238P-201ENST00000363313 Q6ZNB5 142 aa7.88□□□□□ -1.15
RNU6-238P-201ENST00000363313 CERKQ8TCT0 537 aa7.88□□□□□ -1.15
RNU6-238P-201ENST00000363313 DPYSL4O14531 572 aa7.87□□□□□ -1.15
RNU6-238P-201ENST00000363313 SEPT9Q9UHD8 586 aaPredicted RBP7.87□□□□□ -1.15
RNU6-238P-201ENST00000363313 HPS5Q9UPZ3 1129 aa7.87□□□□□ -1.15
RNU6-238P-201ENST00000363313 EN1Q05925 392 aaPredicted RBP7.86□□□□□ -1.15
RNU6-238P-201ENST00000363313 PPP4CP60510 307 aa7.85□□□□□ -1.15
RNU6-238P-201ENST00000363313 PDIA6Q15084 440 aa7.84□□□□□ -1.15
RNU6-238P-201ENST00000363313 NECTIN2Q92692 538 aa7.83□□□□□ -1.16
RNU6-238P-201ENST00000363313 ARIH1Q9Y4X5 557 aaPredicted RBP7.83□□□□□ -1.16
RNU6-238P-201ENST00000363313 DDX12PQ92771 950 aa7.82□□□□□ -1.16
RNU6-238P-201ENST00000363313 RBM33Q96EV2 1170 aaKnown RBP7.82□□□□□ -1.16
RNU6-238P-201ENST00000363313 TSKSQ9UJT2 592 aa7.82□□□□□ -1.16
RNU6-238P-201ENST00000363313 V9GY48 417 aaPredicted RBP7.82□□□□□ -1.16
RNU6-238P-201ENST00000363313 MAP3K7O43318 606 aa7.81□□□□□ -1.16
RNU6-238P-201ENST00000363313 PRSS12P56730 875 aa7.81□□□□□ -1.16
RNU6-238P-201ENST00000363313 TJAP1Q5JTD0 557 aa7.81□□□□□ -1.16
RNU6-238P-201ENST00000363313 HDGFP51858 240 aaKnown RBP7.8□□□□□ -1.16
RNU6-238P-201ENST00000363313 NBR1Q14596 966 aa7.8□□□□□ -1.16
RNU6-238P-201ENST00000363313 TRAF7Q6Q0C0 670 aa7.8□□□□□ -1.16
RNU6-238P-201ENST00000363313 CDCA7LQ96GN5 454 aa7.8□□□□□ -1.16
RNU6-238P-201ENST00000363313 IL21Q9HBE4 155 aa7.8□□□□□ -1.16
RNU6-238P-201ENST00000363313 RBM27Q9P2N5 1060 aaKnown RBP7.8□□□□□ -1.16
RNU6-238P-201ENST00000363313 GFRA3O60609 400 aa7.79□□□□□ -1.16
RNU6-238P-201ENST00000363313 DCAF8L2P0C7V8 631 aa7.79□□□□□ -1.16
RNU6-238P-201ENST00000363313 NBPF26B4DH59 902 aa7.78□□□□□ -1.16
RNU6-238P-201ENST00000363313 NRG2O14511 850 aaPredicted RBP7.78□□□□□ -1.16
RNU6-238P-201ENST00000363313 BBXQ8WY36 941 aaPredicted RBP7.78□□□□□ -1.16
RNU6-238P-201ENST00000363313 TSR1Q2NL82 804 aaKnown RBP7.76□□□□□ -1.17
RNU6-238P-201ENST00000363313 SAMD7Q7Z3H4 446 aa7.76□□□□□ -1.17
RNU6-238P-201ENST00000363313 TATDN2Q93075 761 aa7.76□□□□□ -1.17
RNU6-238P-201ENST00000363313 MTRQ99707 1265 aa7.75□□□□□ -1.17
RNU6-238P-201ENST00000363313 PRKD2Q9BZL6 878 aa7.75□□□□□ -1.17
RNU6-238P-201ENST00000363313 E2F4Q16254 413 aa7.74□□□□□ -1.17
RNU6-238P-201ENST00000363313 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.74□□□□□ -1.17
RNU6-238P-201ENST00000363313 GGCXP38435 758 aa7.73□□□□□ -1.17
RNU6-238P-201ENST00000363313 PPP1R18Q6NYC8 613 aa7.73□□□□□ -1.17
RNU6-238P-201ENST00000363313 TMUB1Q9BVT8 246 aa7.73□□□□□ -1.17
RNU6-238P-201ENST00000363313 FAM198AQ9UFP1 575 aa7.72□□□□□ -1.17
RNU6-238P-201ENST00000363313 PNMA3Q9UL41 463 aa7.72□□□□□ -1.17
RNU6-238P-201ENST00000363313 LCE2BO14633 110 aa7.7□□□□□ -1.18
RNU6-238P-201ENST00000363313 SLC4A3P48751 1232 aa7.7□□□□□ -1.18
RNU6-238P-201ENST00000363313 SLF2Q8IX21 1173 aa7.7□□□□□ -1.18
RNU6-238P-201ENST00000363313 PRR14Q9BWN1 585 aa7.7□□□□□ -1.18
RNU6-238P-201ENST00000363313 SMAPO00193 183 aa7.69□□□□□ -1.18
RNU6-238P-201ENST00000363313 TTC13Q8NBP0 860 aa7.69□□□□□ -1.18
RNU6-238P-201ENST00000363313 SPRYD3Q8NCJ5 442 aa7.69□□□□□ -1.18
RNU6-238P-201ENST00000363313 OSBPP22059 807 aa7.68□□□□□ -1.18
RNU6-238P-201ENST00000363313 NUDT18Q6ZVK8 323 aa7.68□□□□□ -1.18
RNU6-238P-201ENST00000363313 WDR70Q9NW82 654 aa7.68□□□□□ -1.18
RNU6-238P-201ENST00000363313 GRXCR2A6NFK2 248 aa7.67□□□□□ -1.18
RNU6-238P-201ENST00000363313 APLP1P51693 650 aa7.67□□□□□ -1.18
RNU6-238P-201ENST00000363313 ZNF516Q92618 1163 aa7.66□□□□□ -1.18
RNU6-238P-201ENST00000363313 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.66□□□□□ -1.18
RNU6-238P-201ENST00000363313 C3orf80F5H4A9 247 aa7.65□□□□□ -1.18
RNU6-238P-201ENST00000363313 PRIM1P49642 420 aaKnown RBP7.65□□□□□ -1.18
RNU6-238P-201ENST00000363313 PDZRN3Q9UPQ7 1066 aa7.65□□□□□ -1.18
RNU6-238P-201ENST00000363313 ZPR1O75312 459 aa7.62□□□□□ -1.19
RNU6-238P-201ENST00000363313 ZNF787Q6DD87 383 aa7.62□□□□□ -1.19
RNU6-238P-201ENST00000363313 NPDC1Q9NQX5 325 aaPredicted RBP7.62□□□□□ -1.19
RNU6-238P-201ENST00000363313 RNF40O75150 1001 aa7.61□□□□□ -1.19
RNU6-238P-201ENST00000363313 SWT1Q5T5J6 900 aaKnown RBP7.61□□□□□ -1.19
RNU6-238P-201ENST00000363313 EYA1Q99502 592 aa7.61□□□□□ -1.19
RNU6-238P-201ENST00000363313 NKX2-3Q8TAU0 364 aa7.6□□□□□ -1.19
RNU6-238P-201ENST00000363313 CDHR5Q9HBB8 845 aa7.6□□□□□ -1.19
RNU6-238P-201ENST00000363313 DGAT1O75907 488 aa7.58□□□□□ -1.2
RNU6-238P-201ENST00000363313 PRR20EP86478 221 aa7.58□□□□□ -1.2
RNU6-238P-201ENST00000363313 PRR20CP86479 221 aa7.58□□□□□ -1.2
RNU6-238P-201ENST00000363313 PRR20DP86480 221 aa7.58□□□□□ -1.2
RNU6-238P-201ENST00000363313 PRR20BP86481 221 aa7.58□□□□□ -1.2
RNU6-238P-201ENST00000363313 PRR20AP86496 221 aa7.58□□□□□ -1.2
RNU6-238P-201ENST00000363313 PADI6Q6TGC4 694 aa7.58□□□□□ -1.2
RNU6-238P-201ENST00000363313 SLC19A1P41440 591 aa7.57□□□□□ -1.2
RNU6-238P-201ENST00000363313 COPS2P61201 443 aa7.57□□□□□ -1.2
RNU6-238P-201ENST00000363313 PCDHB3Q9Y5E6 796 aa7.57□□□□□ -1.2
RNU6-238P-201ENST00000363313 ANKLE1Q8NAG6 615 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms