RNA–Protein interactions for RNA: ENST00000362003.9

PCGF3-201, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCGF3, Length 5,685 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-201ENST00000362003 ST20-MTHFSA0A0A6YYL1 179 aa21.64■■□□□ 1.05
PCGF3-201ENST00000362003 PANK3Q9H999 370 aa21.64■■□□□ 1.05
PCGF3-201ENST00000362003 NCAPD3P42695 1498 aa21.62■■□□□ 1.05
PCGF3-201ENST00000362003 OSCARQ8IYS5 282 aa21.62■■□□□ 1.05
PCGF3-201ENST00000362003 CCDC9Q9Y3X0 531 aaKnown RBP21.62■■□□□ 1.05
PCGF3-201ENST00000362003 USP47Q96K76 1375 aa21.62■■□□□ 1.05
PCGF3-201ENST00000362003 RBM19Q9Y4C8 960 aaKnown RBP21.62■■□□□ 1.05
PCGF3-201ENST00000362003 CGNL1Q0VF96 1302 aa21.62■■□□□ 1.05
PCGF3-201ENST00000362003 NAP1L5Q96NT1 182 aaPredicted RBP21.61■■□□□ 1.05
PCGF3-201ENST00000362003 GBP4Q96PP9 640 aa21.61■■□□□ 1.05
PCGF3-201ENST00000362003 ISY1Q9ULR0 285 aaKnown RBP21.6■■□□□ 1.05
PCGF3-201ENST00000362003 GORABQ5T7V8 394 aa21.6■■□□□ 1.05
PCGF3-201ENST00000362003 TMX4Q9H1E5 349 aaPredicted RBP21.6■■□□□ 1.05
PCGF3-201ENST00000362003 CHMP3Q9Y3E7 222 aa21.59■■□□□ 1.05
PCGF3-201ENST00000362003 FGD6Q6ZV73 1430 aa21.59■■□□□ 1.05
PCGF3-201ENST00000362003 TAF7LQ5H9L4 462 aa21.59■■□□□ 1.05
PCGF3-201ENST00000362003 COG3Q96JB2 828 aa21.59■■□□□ 1.05
PCGF3-201ENST00000362003 KIF21BO75037 1637 aa21.57■■□□□ 1.04
PCGF3-201ENST00000362003 SLC4A10Q6U841 1118 aa21.57■■□□□ 1.04
PCGF3-201ENST00000362003 LTV1Q96GA3 475 aaPredicted RBP21.57■■□□□ 1.04
PCGF3-201ENST00000362003 HTATSF1O43719 755 aaKnown RBP21.56■■□□□ 1.04
PCGF3-201ENST00000362003 FYCO1Q9BQS8 1478 aa21.55■■□□□ 1.04
PCGF3-201ENST00000362003 NUTM2FA1L443 756 aa21.55■■□□□ 1.04
PCGF3-201ENST00000362003 TRIM6-TRIM34B2RNG4 842 aa21.55■■□□□ 1.04
PCGF3-201ENST00000362003 MFAP1P55081 439 aaKnown RBP21.55■■□□□ 1.04
PCGF3-201ENST00000362003 CHAF1AQ13111 956 aaPredicted RBP21.55■■□□□ 1.04
PCGF3-201ENST00000362003 DRC7Q8IY82 874 aa21.55■■□□□ 1.04
PCGF3-201ENST00000362003 MSNP26038 577 aaKnown RBP21.53■■□□□ 1.04
PCGF3-201ENST00000362003 LRRC9Q6ZRR7 1453 aa21.53■■□□□ 1.04
PCGF3-201ENST00000362003 CLUAP1Q96AJ1 413 aa21.53■■□□□ 1.04
PCGF3-201ENST00000362003 CASKIN1Q8WXD9 1431 aa21.53■■□□□ 1.04
PCGF3-201ENST00000362003 CYB5RLQ6IPT4 315 aa21.52■■□□□ 1.04
PCGF3-201ENST00000362003 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.043e-10■■■■■ 32.7
PCGF3-201ENST00000362003 GRIN2BQ13224 1484 aa21.51■■□□□ 1.03
PCGF3-201ENST00000362003 ERICH3Q5RHP9 1530 aa21.51■■□□□ 1.03
PCGF3-201ENST00000362003 RRP7AQ9Y3A4 280 aaKnown RBP21.5■■□□□ 1.03
PCGF3-201ENST00000362003 E9PSI1 815 aa21.5■■□□□ 1.03
PCGF3-201ENST00000362003 HSP90B1P14625 803 aaKnown RBP21.49■■□□□ 1.03
PCGF3-201ENST00000362003 C1orf141Q5JVX7 400 aa21.49■■□□□ 1.03
PCGF3-201ENST00000362003 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.49■■□□□ 1.03
PCGF3-201ENST00000362003 MINK1Q8N4C8 1332 aaPredicted RBP21.49■■□□□ 1.03
PCGF3-201ENST00000362003 SYAP1Q96A49 352 aaPredicted RBP21.48■■□□□ 1.03
PCGF3-201ENST00000362003 ARHGAP5Q13017 1502 aa21.47■■□□□ 1.03
PCGF3-201ENST00000362003 NCOA2Q15596 1464 aa21.47■■□□□ 1.03
PCGF3-201ENST00000362003 CLSTN1O94985 981 aa21.46■■□□□ 1.03
PCGF3-201ENST00000362003 PRKRIP1Q9H875 184 aaPredicted RBP21.46■■□□□ 1.03
PCGF3-201ENST00000362003 STAC3Q96MF2 364 aa21.44■■□□□ 1.02
PCGF3-201ENST00000362003 SLKQ9H2G2 1235 aaPredicted RBP21.44■■□□□ 1.02
PCGF3-201ENST00000362003 CSPP1Q1MSJ5 1256 aa21.43■■□□□ 1.02
PCGF3-201ENST00000362003 RTN4Q9NQC3 1192 aaKnown RBP21.43■■□□□ 1.02
PCGF3-201ENST00000362003 ZBED9Q6R2W3 1325 aa21.43■■□□□ 1.02
PCGF3-201ENST00000362003 CENPQQ7L2Z9 268 aaPredicted RBP21.42■■□□□ 1.02
PCGF3-201ENST00000362003 MRC2Q9UBG0 1479 aa21.42■■□□□ 1.02
PCGF3-201ENST00000362003 ZKSCAN2Q63HK3 967 aa21.42■■□□□ 1.02
PCGF3-201ENST00000362003 EFCAB5A4FU69 1503 aa21.41■■□□□ 1.02
PCGF3-201ENST00000362003 DEKP35659 375 aaKnown RBP21.41■■□□□ 1.02
PCGF3-201ENST00000362003 SYNJ2O15056 1496 aa21.41■■□□□ 1.02
PCGF3-201ENST00000362003 ANKRD50Q9ULJ7 1429 aa21.4■■□□□ 1.02
PCGF3-201ENST00000362003 MIA2Q96PC5 1412 aa21.4■■□□□ 1.02
PCGF3-201ENST00000362003 TPM4P67936 248 aa21.4■■□□□ 1.02
PCGF3-201ENST00000362003 DIAPH1O60610 1272 aaKnown RBP21.4■■□□□ 1.02
PCGF3-201ENST00000362003 FAM69CQ0P6D2 419 aa21.4■■□□□ 1.02
PCGF3-201ENST00000362003 G3V3G9 751 aa21.39■■□□□ 1.02
PCGF3-201ENST00000362003 DCAF8Q5TAQ9 597 aa21.39■■□□□ 1.02
PCGF3-201ENST00000362003 IPO9Q96P70 1041 aaKnown RBP21.39■■□□□ 1.02
PCGF3-201ENST00000362003 SYNJ1O43426 1573 aa21.39■■□□□ 1.01
PCGF3-201ENST00000362003 RRP1P56182 461 aaKnown RBP21.38■■□□□ 1.01
PCGF3-201ENST00000362003 EVA1CP58658 441 aa21.38■■□□□ 1.01
PCGF3-201ENST00000362003 ST18O60284 1047 aa21.38■■□□□ 1.01
PCGF3-201ENST00000362003 CFTRP13569 1480 aa21.38■■□□□ 1.01
PCGF3-201ENST00000362003 ZNF644Q9H582 1327 aaPredicted RBP21.38■■□□□ 1.01
PCGF3-201ENST00000362003 NGEFQ8N5V2 710 aa21.37■■□□□ 1.01
PCGF3-201ENST00000362003 EHBP1L1Q8N3D4 1523 aa21.37■■□□□ 1.01
PCGF3-201ENST00000362003 IFT140Q96RY7 1462 aa21.37■■□□□ 1.01
PCGF3-201ENST00000362003 CCDC34Q96HJ3 373 aa21.36■■□□□ 1.01
PCGF3-201ENST00000362003 TEFQ10587 303 aa21.36■■□□□ 1.01
PCGF3-201ENST00000362003 GTF2E1P29083 439 aaPredicted RBP21.35■■□□□ 1.01
PCGF3-201ENST00000362003 KIAA2012Q0VF49 1180 aa21.35■■□□□ 1.01
PCGF3-201ENST00000362003 TTC5Q8N0Z6 440 aa21.34■■□□□ 1.01
PCGF3-201ENST00000362003 KIF16BQ96L93 1317 aa21.34■■□□□ 1.01
PCGF3-201ENST00000362003 RRBP1Q9P2E9 1410 aaKnown RBP21.34■■□□□ 1.01
PCGF3-201ENST00000362003 HECW1Q76N89 1606 aa21.33■■□□□ 1.01
PCGF3-201ENST00000362003 GZF1Q9H116 711 aaPredicted RBP21.33■■□□□ 1
PCGF3-201ENST00000362003 CCDC7Q96M83 1385 aa21.33■■□□□ 1
PCGF3-201ENST00000362003 ELL2O00472 640 aaPredicted RBP21.33■■□□□ 1
PCGF3-201ENST00000362003 HMGXB3Q12766 1538 aa21.32■■□□□ 1
PCGF3-201ENST00000362003 TOP2BQ02880 1626 aa21.32■■□□□ 1
PCGF3-201ENST00000362003 BCL2L13Q9BXK5 485 aa21.32■■□□□ 1
PCGF3-201ENST00000362003 ROCK1Q13464 1354 aa21.32■■□□□ 1
PCGF3-201ENST00000362003 PSME1Q06323 249 aa21.31■■□□□ 1
PCGF3-201ENST00000362003 ANKRD45Q5TZF3 282 aa21.31■■□□□ 1
PCGF3-201ENST00000362003 NOL8Q76FK4 1167 aaKnown RBP21.31■■□□□ 1
PCGF3-201ENST00000362003 KIF3AQ9Y496 699 aa21.31■■□□□ 1
PCGF3-201ENST00000362003 CNTLNQ9NXG0 1405 aa21.31■■□□□ 1
PCGF3-201ENST00000362003 FRAT2O75474 233 aaPredicted RBP21.31■■□□□ 1
PCGF3-201ENST00000362003 PRG4Q92954 1404 aaPredicted RBP21.31■■□□□ 1
PCGF3-201ENST00000362003 CRBNQ96SW2 442 aa21.31■■□□□ 1
PCGF3-201ENST00000362003 APAF1O14727 1248 aa21.3■■□□□ 1
PCGF3-201ENST00000362003 CC2D2AQ9P2K1 1620 aa21.3■■□□□ 1
PCGF3-201ENST00000362003 RUNDC1Q96C34 613 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms