RNA–Protein interactions for RNA: ENST00000361724.3

PCDH11X-203, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,603 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-203ENST00000361724 NPM3O75607 178 aaKnown RBP4.33□□□□□ -1.72
PCDH11X-203ENST00000361724 C8orf37Q96NL8 207 aa4.33□□□□□ -1.72
PCDH11X-203ENST00000361724 HSPA1LP34931 641 aa4.33□□□□□ -1.72
PCDH11X-203ENST00000361724 USP21Q9UK80 565 aa4.33□□□□□ -1.72
PCDH11X-203ENST00000361724 TDRD9Q8NDG6 1382 aaKnown RBP4.33□□□□□ -1.72
PCDH11X-203ENST00000361724 ANKRD30BQ9BXX2 1392 aa4.33□□□□□ -1.72
PCDH11X-203ENST00000361724 KIF22Q14807 665 aa4.32□□□□□ -1.72
PCDH11X-203ENST00000361724 GGT6Q6P531 493 aa4.32□□□□□ -1.72
PCDH11X-203ENST00000361724 FAM196AQ6ZSG2 479 aa4.32□□□□□ -1.72
PCDH11X-203ENST00000361724 PRELPP51888 382 aa4.32□□□□□ -1.72
PCDH11X-203ENST00000361724 CPS1P31327 1500 aa4.32□□□□□ -1.72
PCDH11X-203ENST00000361724 PARD3Q8TEW0 1356 aa4.32□□□□□ -1.72
PCDH11X-203ENST00000361724 C1QTNF8P60827 252 aa4.32□□□□□ -1.72
PCDH11X-203ENST00000361724 SLC51AQ86UW1 340 aa4.32□□□□□ -1.72
PCDH11X-203ENST00000361724 U3KPZ7 1027 aaPredicted RBP4.32□□□□□ -1.72
PCDH11X-203ENST00000361724 NF2P35240 595 aa4.31□□□□□ -1.72
PCDH11X-203ENST00000361724 OTUD7BQ6GQQ9 843 aa4.31□□□□□ -1.72
PCDH11X-203ENST00000361724 SNAPC4Q5SXM2 1469 aa4.31□□□□□ -1.72
PCDH11X-203ENST00000361724 PRKCSHP14314 528 aaPredicted RBP4.31□□□□□ -1.72
PCDH11X-203ENST00000361724 EFCAB5A4FU69 1503 aa4.31□□□□□ -1.72
PCDH11X-203ENST00000361724 DSG3P32926 999 aa4.31□□□□□ -1.72
PCDH11X-203ENST00000361724 SMC1BQ8NDV3 1235 aa4.31□□□□□ -1.72
PCDH11X-203ENST00000361724 GPRASP1Q5JY77 1395 aa4.31□□□□□ -1.72
PCDH11X-203ENST00000361724 UACAQ9BZF9 1416 aa4.31□□□□□ -1.72
PCDH11X-203ENST00000361724 PCGF6Q9BYE7 350 aa4.31□□□□□ -1.72
PCDH11X-203ENST00000361724 ACEP12821 1306 aa4.31□□□□□ -1.72
PCDH11X-203ENST00000361724 MAP2K1Q02750 393 aaPredicted RBP4.3□□□□□ -1.72
PCDH11X-203ENST00000361724 TXNDC2Q86VQ3 553 aa4.3□□□□□ -1.72
PCDH11X-203ENST00000361724 CLEC11AQ9Y240 323 aa4.3□□□□□ -1.72
PCDH11X-203ENST00000361724 HCN4Q9Y3Q4 1203 aa4.3□□□□□ -1.72
PCDH11X-203ENST00000361724 PLEKHH2Q8IVE3 1493 aa4.3□□□□□ -1.72
PCDH11X-203ENST00000361724 CCDC85CA6NKD9 419 aa4.3□□□□□ -1.72
PCDH11X-203ENST00000361724 SOGA3Q5TF21 947 aa4.3□□□□□ -1.72
PCDH11X-203ENST00000361724 REM2Q8IYK8 340 aaPredicted RBP4.3□□□□□ -1.72
PCDH11X-203ENST00000361724 PDZRN3Q9UPQ7 1066 aa4.3□□□□□ -1.72
PCDH11X-203ENST00000361724 MAGI2Q86UL8 1455 aa4.3□□□□□ -1.72
PCDH11X-203ENST00000361724 ARAP1Q96P48 1450 aa4.3□□□□□ -1.72
PCDH11X-203ENST00000361724 TRAPPC8Q9Y2L5 1435 aa4.29□□□□□ -1.72
PCDH11X-203ENST00000361724 EIF5P55010 431 aaKnown RBP4.29□□□□□ -1.72
PCDH11X-203ENST00000361724 SLC16A10Q8TF71 515 aa4.29□□□□□ -1.72
PCDH11X-203ENST00000361724 NSD3Q9BZ95 1437 aa4.29□□□□□ -1.72
PCDH11X-203ENST00000361724 CSPP1Q1MSJ5 1256 aa4.29□□□□□ -1.72
PCDH11X-203ENST00000361724 TCOF1Q13428 1488 aaKnown RBP4.29□□□□□ -1.72
PCDH11X-203ENST00000361724 SMARCA4P51532 1647 aa4.29□□□□□ -1.72
PCDH11X-203ENST00000361724 RFX1P22670 979 aa4.29□□□□□ -1.72
PCDH11X-203ENST00000361724 KDM4FA0A1W2PPD8 638 aa4.28□□□□□ -1.72
PCDH11X-203ENST00000361724 PRKAG2Q9UGJ0 569 aa4.28□□□□□ -1.72
PCDH11X-203ENST00000361724 SLC4A2P04920 1241 aa4.28□□□□□ -1.72
PCDH11X-203ENST00000361724 HECW2Q9P2P5 1572 aa4.28□□□□□ -1.72
PCDH11X-203ENST00000361724 FSTL1Q12841 308 aa4.28□□□□□ -1.72
PCDH11X-203ENST00000361724 CHMP4AQ9BY43 222 aa4.28□□□□□ -1.72
PCDH11X-203ENST00000361724 ZNF219Q9P2Y4 722 aaPredicted RBP4.28□□□□□ -1.72
PCDH11X-203ENST00000361724 ZCCHC6Q5VYS8 1495 aaKnown RBP4.28□□□□□ -1.72
PCDH11X-203ENST00000361724 MINK1Q8N4C8 1332 aaPredicted RBP4.28□□□□□ -1.72
PCDH11X-203ENST00000361724 IQCA1LA6NCM1 817 aa4.28□□□□□ -1.72
PCDH11X-203ENST00000361724 FAM122AQ96E09 287 aa4.28□□□□□ -1.72
PCDH11X-203ENST00000361724 NEO1Q92859 1461 aa4.28□□□□□ -1.73
PCDH11X-203ENST00000361724 HSP90B1P14625 803 aaKnown RBP4.27□□□□□ -1.73
PCDH11X-203ENST00000361724 HSPA6P17066 643 aa4.27□□□□□ -1.73
PCDH11X-203ENST00000361724 KRT27Q7Z3Y8 459 aa4.27□□□□□ -1.73
PCDH11X-203ENST00000361724 HTATIP2Q9BUP3 242 aa4.27□□□□□ -1.73
PCDH11X-203ENST00000361724 NESP48681 1621 aa4.27□□□□□ -1.73
PCDH11X-203ENST00000361724 NPHP3Q7Z494 1330 aa4.27□□□□□ -1.73
PCDH11X-203ENST00000361724 ZBTB7CA1YPR0 619 aa4.27□□□□□ -1.73
PCDH11X-203ENST00000361724 FAM50BQ9Y247 325 aa4.27□□□□□ -1.73
PCDH11X-203ENST00000361724 KCNQ2O43526 872 aa4.27□□□□□ -1.73
PCDH11X-203ENST00000361724 RTL5Q5HYW3 569 aaPredicted RBP4.26□□□□□ -1.73
PCDH11X-203ENST00000361724 C9orf84Q5VXU9 1444 aa4.26□□□□□ -1.73
PCDH11X-203ENST00000361724 RAB3GAP2Q9H2M9 1393 aa4.26□□□□□ -1.73
PCDH11X-203ENST00000361724 EXOC5O00471 708 aa4.26□□□□□ -1.73
PCDH11X-203ENST00000361724 NEFLP07196 543 aa4.26□□□□□ -1.73
PCDH11X-203ENST00000361724 MTIF3Q9H2K0 278 aaKnown RBP4.26□□□□□ -1.73
PCDH11X-203ENST00000361724 DAXXQ9UER7 740 aaPredicted RBP4.26□□□□□ -1.73
PCDH11X-203ENST00000361724 ROCK1Q13464 1354 aa4.26□□□□□ -1.73
PCDH11X-203ENST00000361724 APBA3O96018 575 aa4.26□□□□□ -1.73
PCDH11X-203ENST00000361724 RDXP35241 583 aaKnown RBP4.26□□□□□ -1.73
PCDH11X-203ENST00000361724 SKAP1Q86WV1 359 aa4.26□□□□□ -1.73
PCDH11X-203ENST00000361724 UPF1Q92900 1129 aaKnown RBP eCLIP4.26□□□□□ -1.73
PCDH11X-203ENST00000361724 POGKQ9P215 609 aa4.26□□□□□ -1.73
PCDH11X-203ENST00000361724 PCF11O94913 1555 aaKnown RBP4.26□□□□□ -1.73
PCDH11X-203ENST00000361724 ADAMTS2O95450 1211 aa4.25□□□□□ -1.73
PCDH11X-203ENST00000361724 CCAR1Q8IX12 1150 aaKnown RBP4.25□□□□□ -1.73
PCDH11X-203ENST00000361724 DNMBPQ6XZF7 1577 aa4.25□□□□□ -1.73
PCDH11X-203ENST00000361724 TNRQ92752 1358 aa4.25□□□□□ -1.73
PCDH11X-203ENST00000361724 FKBP8Q14318 412 aa4.25□□□□□ -1.73
PCDH11X-203ENST00000361724 CFDP1Q9UEE9 299 aaPredicted RBP4.25□□□□□ -1.73
PCDH11X-203ENST00000361724 KIAA0556O60303 1618 aa4.25□□□□□ -1.73
PCDH11X-203ENST00000361724 ASXL2Q76L83 1435 aa4.25□□□□□ -1.73
PCDH11X-203ENST00000361724 SLC17A8Q8NDX2 589 aa4.25□□□□□ -1.73
PCDH11X-203ENST00000361724 AQRO60306 1485 aaKnown RBP eCLIP4.25□□□□□ -1.73
PCDH11X-203ENST00000361724 PTPRMP28827 1452 aa4.25□□□□□ -1.73
PCDH11X-203ENST00000361724 AAK1Q2M2I8 961 aa4.25□□□□□ -1.73
PCDH11X-203ENST00000361724 CCDC87Q9NVE4 849 aa4.25□□□□□ -1.73
PCDH11X-203ENST00000361724 CFAP74Q9C0B2 1584 aa4.24□□□□□ -1.73
PCDH11X-203ENST00000361724 RALGAPBQ86X10 1494 aa4.24□□□□□ -1.73
PCDH11X-203ENST00000361724 POTEHQ6S545 545 aa4.24□□□□□ -1.73
PCDH11X-203ENST00000361724 FHOD3Q2V2M9 1422 aa4.24□□□□□ -1.73
PCDH11X-203ENST00000361724 SETD5Q9C0A6 1442 aa4.24□□□□□ -1.73
PCDH11X-203ENST00000361724 AFF2P51816 1311 aa4.24□□□□□ -1.73
PCDH11X-203ENST00000361724 C19orf44Q9H6X5 657 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms