RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 KIF16BQ96L93 1317 aa25.23■■□□□ 1.63
SMURF1-202ENST00000361368 SMARCA2P51531 1590 aa25.23■■□□□ 1.63
SMURF1-202ENST00000361368 CCDC18Q5T9S5 1454 aa25.22■■□□□ 1.63
SMURF1-202ENST00000361368 VPS53Q5VIR6 699 aa25.22■■□□□ 1.63
SMURF1-202ENST00000361368 C1orf141Q5JVX7 400 aa25.21■■□□□ 1.63
SMURF1-202ENST00000361368 UACAQ9BZF9 1416 aa25.21■■□□□ 1.63
SMURF1-202ENST00000361368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.21■■□□□ 1.631e-6■■■□□ 16.6
SMURF1-202ENST00000361368 ST18O60284 1047 aa25.21■■□□□ 1.63
SMURF1-202ENST00000361368 A0A0U1RQG5 324 aaPredicted RBP25.2■■□□□ 1.62
SMURF1-202ENST00000361368 RAB3GAP2Q9H2M9 1393 aa25.19■■□□□ 1.62
SMURF1-202ENST00000361368 LRRFIP1Q32MZ4 808 aaKnown RBP25.18■■□□□ 1.62
SMURF1-202ENST00000361368 SLKQ9H2G2 1235 aaPredicted RBP25.18■■□□□ 1.62
SMURF1-202ENST00000361368 PHF14O94880 888 aa25.18■■□□□ 1.62
SMURF1-202ENST00000361368 TPM3P06753 285 aa25.18■■□□□ 1.62
SMURF1-202ENST00000361368 EVA1CP58658 441 aa25.18■■□□□ 1.62
SMURF1-202ENST00000361368 SF3A1Q15459 793 aaKnown RBP25.18■■□□□ 1.62
SMURF1-202ENST00000361368 NUTM2DQ5VT03 806 aaPredicted RBP25.17■■□□□ 1.62
SMURF1-202ENST00000361368 GOLGA6L1Q8N7Z2 621 aa25.17■■□□□ 1.62
SMURF1-202ENST00000361368 KANK4Q5T7N3 995 aaPredicted RBP25.17■■□□□ 1.62
SMURF1-202ENST00000361368 COG3Q96JB2 828 aa25.16■■□□□ 1.62
SMURF1-202ENST00000361368 CECR2Q9BXF3 1484 aa25.15■■□□□ 1.62
SMURF1-202ENST00000361368 AMOTL1Q8IY63 956 aa25.15■■□□□ 1.62
SMURF1-202ENST00000361368 NOL10Q9BSC4 688 aaKnown RBP25.14■■□□□ 1.62
SMURF1-202ENST00000361368 AKAP17AQ02040 695 aaKnown RBP25.14■■□□□ 1.61
SMURF1-202ENST00000361368 VGFO15240 615 aaPredicted RBP25.13■■□□□ 1.61
SMURF1-202ENST00000361368 CCDC146Q8IYE0 955 aa25.13■■□□□ 1.61
SMURF1-202ENST00000361368 CLUAP1Q96AJ1 413 aa25.13■■□□□ 1.61
SMURF1-202ENST00000361368 CREBRFQ8IUR6 639 aa25.13■■□□□ 1.61
SMURF1-202ENST00000361368 TRAK1Q9UPV9 953 aa25.13■■□□□ 1.61
SMURF1-202ENST00000361368 GZF1Q9H116 711 aaPredicted RBP25.12■■□□□ 1.61
SMURF1-202ENST00000361368 NUTM2FA1L443 756 aa25.11■■□□□ 1.61
SMURF1-202ENST00000361368 TTC5Q8N0Z6 440 aa25.11■■□□□ 1.61
SMURF1-202ENST00000361368 GOLGA6L3A6NEY3 463 aa25.1■■□□□ 1.61
SMURF1-202ENST00000361368 NEXNQ0ZGT2 675 aa25.1■■□□□ 1.61
SMURF1-202ENST00000361368 TEFQ10587 303 aa25.1■■□□□ 1.61
SMURF1-202ENST00000361368 SYNE3Q6ZMZ3 975 aa25.1■■□□□ 1.61
SMURF1-202ENST00000361368 L3MBTL2Q969R5 705 aa25.1■■□□□ 1.61
SMURF1-202ENST00000361368 TRIM34Q9BYJ4 488 aa25.09■■□□□ 1.61
SMURF1-202ENST00000361368 KIF15Q9NS87 1388 aa25.09■■□□□ 1.61
SMURF1-202ENST00000361368 EVC2Q86UK5 1308 aa25.09■■□□□ 1.61
SMURF1-202ENST00000361368 H3BQV1 296 aa25.08■■□□□ 1.61
SMURF1-202ENST00000361368 IFFO2Q5TF58 517 aa25.08■■□□□ 1.61
SMURF1-202ENST00000361368 DEKP35659 375 aaKnown RBP25.08■■□□□ 1.6
SMURF1-202ENST00000361368 RBM19Q9Y4C8 960 aaKnown RBP25.08■■□□□ 1.6
SMURF1-202ENST00000361368 NOL8Q76FK4 1167 aaKnown RBP25.07■■□□□ 1.6
SMURF1-202ENST00000361368 CGNL1Q0VF96 1302 aa25.07■■□□□ 1.6
SMURF1-202ENST00000361368 MSH5O43196 834 aa25.07■■□□□ 1.6
SMURF1-202ENST00000361368 CCDC144AA2RUR9 1427 aa25.07■■□□□ 1.6
SMURF1-202ENST00000361368 TSR1Q2NL82 804 aaKnown RBP25.07■■□□□ 1.6
SMURF1-202ENST00000361368 CTDP1Q9Y5B0 961 aaPredicted RBP25.07■■□□□ 1.6
SMURF1-202ENST00000361368 TPD52L1Q16890 204 aaPredicted RBP25.07■■□□□ 1.6
SMURF1-202ENST00000361368 CCDC88BA6NC98 1476 aa25.07■■□□□ 1.6
SMURF1-202ENST00000361368 TPM2P07951 284 aa25.06■■□□□ 1.6
SMURF1-202ENST00000361368 ATP6V1DQ9Y5K8 247 aa25.06■■□□□ 1.6
SMURF1-202ENST00000361368 FAM184AQ8NB25 1140 aa25.06■■□□□ 1.6
SMURF1-202ENST00000361368 PDE4CQ08493 712 aa25.06■■□□□ 1.6
SMURF1-202ENST00000361368 CPLX2Q6PUV4 134 aaKnown RBP25.06■■□□□ 1.6
SMURF1-202ENST00000361368 JPH4Q96JJ6 628 aa25.05■■□□□ 1.6
SMURF1-202ENST00000361368 TCEAL9Q9UHQ7 104 aa25.05■■□□□ 1.6
SMURF1-202ENST00000361368 RAPGEF2Q9Y4G8 1499 aa25.04■■□□□ 1.6
SMURF1-202ENST00000361368 MYBBP1AQ9BQG0 1328 aaKnown RBP25.02■■□□□ 1.6
SMURF1-202ENST00000361368 RILPL2Q969X0 211 aa25■■□□□ 1.59
SMURF1-202ENST00000361368 RUFY2Q8WXA3 655 aa25■■□□□ 1.59
SMURF1-202ENST00000361368 PES1O00541 588 aaKnown RBP25■■□□□ 1.59
SMURF1-202ENST00000361368 TPM1P09493 284 aa25■■□□□ 1.59
SMURF1-202ENST00000361368 DIAPH3Q9NSV4 1193 aa24.98■■□□□ 1.59
SMURF1-202ENST00000361368 ZKSCAN2Q63HK3 967 aa24.98■■□□□ 1.59
SMURF1-202ENST00000361368 E9PSI1 815 aa24.97■■□□□ 1.59
SMURF1-202ENST00000361368 MEX3CQ5U5Q3 659 aaKnown RBP24.97■■□□□ 1.59
SMURF1-202ENST00000361368 DDX11L8A8MPP1 907 aa24.97■■□□□ 1.59
SMURF1-202ENST00000361368 DDX58O95786 925 aaKnown RBP24.97■■□□□ 1.59
SMURF1-202ENST00000361368 CCDC47Q96A33 483 aaKnown RBP24.96■■□□□ 1.59
SMURF1-202ENST00000361368 C9orf78Q9NZ63 289 aaPredicted RBP24.96■■□□□ 1.59
SMURF1-202ENST00000361368 TRIM29Q14134 588 aa24.96■■□□□ 1.59
SMURF1-202ENST00000361368 FHOD3Q2V2M9 1422 aa24.95■■□□□ 1.59
SMURF1-202ENST00000361368 FOXD4L1Q9NU39 408 aa24.95■■□□□ 1.58
SMURF1-202ENST00000361368 PANK3Q9H999 370 aa24.95■■□□□ 1.58
SMURF1-202ENST00000361368 CADPSQ9ULU8 1353 aa24.94■■□□□ 1.58
SMURF1-202ENST00000361368 RRP7AQ9Y3A4 280 aaKnown RBP24.94■■□□□ 1.58
SMURF1-202ENST00000361368 ANKRD45Q5TZF3 282 aa24.93■■□□□ 1.58
SMURF1-202ENST00000361368 GOLGA6L19H0YKK7 550 aa24.93■■□□□ 1.58
SMURF1-202ENST00000361368 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.93■■□□□ 1.58
SMURF1-202ENST00000361368 IPO9Q96P70 1041 aaKnown RBP24.93■■□□□ 1.58
SMURF1-202ENST00000361368 VPS37DQ86XT2 251 aa24.92■■□□□ 1.58
SMURF1-202ENST00000361368 ZKSCAN1P17029 563 aaPredicted RBP24.92■■□□□ 1.58
SMURF1-202ENST00000361368 CENPQQ7L2Z9 268 aaPredicted RBP24.92■■□□□ 1.58
SMURF1-202ENST00000361368 ELL2O00472 640 aaPredicted RBP24.91■■□□□ 1.58
SMURF1-202ENST00000361368 PSME1Q06323 249 aa24.91■■□□□ 1.58
SMURF1-202ENST00000361368 ABCC8Q09428 1581 aa24.9■■□□□ 1.58
SMURF1-202ENST00000361368 BECN2A8MW95 431 aa24.9■■□□□ 1.58
SMURF1-202ENST00000361368 TNNT3P45378 269 aaPredicted RBP24.9■■□□□ 1.58
SMURF1-202ENST00000361368 ST20-MTHFSA0A0A6YYL1 179 aa24.89■■□□□ 1.58
SMURF1-202ENST00000361368 CCDC70Q6NSX1 233 aa24.89■■□□□ 1.58
SMURF1-202ENST00000361368 NGEFQ8N5V2 710 aa24.89■■□□□ 1.58
SMURF1-202ENST00000361368 PTPRGP23470 1445 aa24.89■■□□□ 1.58
SMURF1-202ENST00000361368 RAD21O60216 631 aa24.89■■□□□ 1.57
SMURF1-202ENST00000361368 IFIT2P09913 472 aaKnown RBP24.88■■□□□ 1.57
SMURF1-202ENST00000361368 EIF2S2P20042 333 aaKnown RBP24.88■■□□□ 1.57
SMURF1-202ENST00000361368 ROCK1Q13464 1354 aa24.88■■□□□ 1.57
SMURF1-202ENST00000361368 API5Q9BZZ5 524 aaKnown RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms