RNA–Protein interactions for RNA: ENST00000360428.8

DSC3-201, Transcript of desmocollin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSC3, Length 6,939 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-201ENST00000360428 IFFO2Q5TF58 517 aa7.28□□□□□ -1.24
DSC3-201ENST00000360428 RRP12Q5JTH9 1297 aaKnown RBP7.28□□□□□ -1.24
DSC3-201ENST00000360428 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.28□□□□□ -1.24
DSC3-201ENST00000360428 CENPQQ7L2Z9 268 aaPredicted RBP7.28□□□□□ -1.24
DSC3-201ENST00000360428 MTERF4Q7Z6M4 381 aaKnown RBP7.28□□□□□ -1.24
DSC3-201ENST00000360428 SMC4Q9NTJ3 1288 aa7.28□□□□□ -1.24
DSC3-201ENST00000360428 TOP2AP11388 1531 aaKnown RBP7.28□□□□□ -1.24
DSC3-201ENST00000360428 HOOK1Q9UJC3 728 aaKnown RBP7.28□□□□□ -1.24
DSC3-201ENST00000360428 BECN2A8MW95 431 aa7.27□□□□□ -1.24
DSC3-201ENST00000360428 AK7Q96M32 723 aa7.27□□□□□ -1.24
DSC3-201ENST00000360428 TSHZ2Q9NRE2 1034 aa7.27□□□□□ -1.24
DSC3-201ENST00000360428 CCDC88BA6NC98 1476 aa7.27□□□□□ -1.25
DSC3-201ENST00000360428 LRRFIP1Q32MZ4 808 aaKnown RBP7.27□□□□□ -1.25
DSC3-201ENST00000360428 CCDC47Q96A33 483 aaKnown RBP7.27□□□□□ -1.25
DSC3-201ENST00000360428 ANKRD20A12PQ8NF67 263 aa7.27□□□□□ -1.25
DSC3-201ENST00000360428 CENPJQ9HC77 1338 aaPredicted RBP7.27□□□□□ -1.25
DSC3-201ENST00000360428 CREBRFQ8IUR6 639 aa7.27□□□□□ -1.25
DSC3-201ENST00000360428 MARCH6O60337 910 aa7.27□□□□□ -1.25
DSC3-201ENST00000360428 U2AF1L5P0DN76 240 aaPredicted RBP7.27□□□□□ -1.25
DSC3-201ENST00000360428 U2AF1Q01081 240 aaKnown RBP eCLIP7.27□□□□□ -1.25
DSC3-201ENST00000360428 FAM161AQ3B820 660 aa7.26□□□□□ -1.25
DSC3-201ENST00000360428 FAM184AQ8NB25 1140 aa7.26□□□□□ -1.25
DSC3-201ENST00000360428 ARGLU1Q9NWB6 273 aaPredicted RBP7.26□□□□□ -1.25
DSC3-201ENST00000360428 DDX49Q9Y6V7 483 aaKnown RBP7.26□□□□□ -1.25
DSC3-201ENST00000360428 IPO7O95373 1038 aaKnown RBP7.26□□□□□ -1.25
DSC3-201ENST00000360428 VSIG10Q8N0Z9 540 aa7.26□□□□□ -1.25
DSC3-201ENST00000360428 MAP7D2Q96T17 732 aa7.26□□□□□ -1.25
DSC3-201ENST00000360428 BAZ1BQ9UIG0 1483 aaKnown RBP7.25□□□□□ -1.25
DSC3-201ENST00000360428 AKAP17AQ02040 695 aaKnown RBP7.25□□□□□ -1.25
DSC3-201ENST00000360428 CCAR2Q8N163 923 aaKnown RBP7.25□□□□□ -1.25
DSC3-201ENST00000360428 CWC15Q9P013 229 aaKnown RBP7.25□□□□□ -1.25
DSC3-201ENST00000360428 PES1O00541 588 aaKnown RBP7.24□□□□□ -1.25
DSC3-201ENST00000360428 RUFY1Q96T51 708 aa7.24□□□□□ -1.25
DSC3-201ENST00000360428 SYNE3Q6ZMZ3 975 aa7.24□□□□□ -1.25
DSC3-201ENST00000360428 RUFY2Q8WXA3 655 aa7.24□□□□□ -1.25
DSC3-201ENST00000360428 TERF2IPQ9NYB0 399 aa7.24□□□□□ -1.25
DSC3-201ENST00000360428 KIF15Q9NS87 1388 aa7.24□□□□□ -1.25
DSC3-201ENST00000360428 CPLX2Q6PUV4 134 aaKnown RBP7.23□□□□□ -1.25
DSC3-201ENST00000360428 CHMP3Q9Y3E7 222 aa7.23□□□□□ -1.25
DSC3-201ENST00000360428 TRIM29Q14134 588 aa7.23□□□□□ -1.25
DSC3-201ENST00000360428 DCTN1Q14203 1278 aa7.23□□□□□ -1.25
DSC3-201ENST00000360428 NLRP13Q86W25 1043 aa7.23□□□□□ -1.25
DSC3-201ENST00000360428 FANCIQ9NVI1 1328 aa7.22□□□□□ -1.25
DSC3-201ENST00000360428 ERCC4Q92889 916 aaPredicted RBP7.22□□□□□ -1.25
DSC3-201ENST00000360428 DIAPH3Q9NSV4 1193 aa7.22□□□□□ -1.25
DSC3-201ENST00000360428 SYNJ1O43426 1573 aa7.22□□□□□ -1.25
DSC3-201ENST00000360428 G3V3G9 751 aa7.22□□□□□ -1.25
DSC3-201ENST00000360428 PDE4CQ08493 712 aa7.22□□□□□ -1.25
DSC3-201ENST00000360428 DCAF8Q5TAQ9 597 aa7.22□□□□□ -1.25
DSC3-201ENST00000360428 FOXD4L1Q9NU39 408 aa7.22□□□□□ -1.25
DSC3-201ENST00000360428 REC8O95072 547 aa7.22□□□□□ -1.25
DSC3-201ENST00000360428 ERCC6Q03468 1493 aa7.21□□□□□ -1.25
DSC3-201ENST00000360428 HOMER1Q86YM7 354 aa7.21□□□□□ -1.25
DSC3-201ENST00000360428 ZNF592Q92610 1267 aa7.21□□□□□ -1.25
DSC3-201ENST00000360428 MYO6Q9UM54 1294 aa7.21□□□□□ -1.25
DSC3-201ENST00000360428 ROCK1Q13464 1354 aa7.21□□□□□ -1.26
DSC3-201ENST00000360428 CCDC66A2RUB6 948 aa7.21□□□□□ -1.26
DSC3-201ENST00000360428 CSB-PGBD3P0DP91 1061 aa7.21□□□□□ -1.26
DSC3-201ENST00000360428 AMOTL1Q8IY63 956 aa7.21□□□□□ -1.26
DSC3-201ENST00000360428 CCDC191Q8NCU4 936 aa7.21□□□□□ -1.26
DSC3-201ENST00000360428 PCMTD1Q96MG8 357 aaPredicted RBP7.21□□□□□ -1.26
DSC3-201ENST00000360428 CHMP5Q9NZZ3 219 aa7.21□□□□□ -1.26
DSC3-201ENST00000360428 PDE4AP27815 886 aa7.21□□□□□ -1.26
DSC3-201ENST00000360428 HSP90B2PQ58FF3 399 aa7.21□□□□□ -1.26
DSC3-201ENST00000360428 VPS53Q5VIR6 699 aa7.21□□□□□ -1.26
DSC3-201ENST00000360428 PATL2C9JE40 543 aaKnown RBP7.2□□□□□ -1.26
DSC3-201ENST00000360428 SOX12O15370 315 aa7.2□□□□□ -1.26
DSC3-201ENST00000360428 LETM1O95202 739 aaPredicted RBP7.2□□□□□ -1.26
DSC3-201ENST00000360428 NUCB2P80303 420 aa7.2□□□□□ -1.26
DSC3-201ENST00000360428 NOL8Q76FK4 1167 aaKnown RBP7.2□□□□□ -1.26
DSC3-201ENST00000360428 ANKRD30AQ9BXX3 1397 aa7.2□□□□□ -1.26
DSC3-201ENST00000360428 PKD2Q13563 968 aa7.2□□□□□ -1.26
DSC3-201ENST00000360428 NGEFQ8N5V2 710 aa7.2□□□□□ -1.26
DSC3-201ENST00000360428 CCDC39Q9UFE4 941 aa7.2□□□□□ -1.26
DSC3-201ENST00000360428 VPS8Q8N3P4 1428 aa7.2□□□□□ -1.26
DSC3-201ENST00000360428 MYBBP1AQ9BQG0 1328 aaKnown RBP7.2□□□□□ -1.26
DSC3-201ENST00000360428 SLC4A10Q6U841 1118 aa7.2□□□□□ -1.26
DSC3-201ENST00000360428 SASS6Q6UVJ0 657 aa7.2□□□□□ -1.26
DSC3-201ENST00000360428 FAM43AQ8N2R8 423 aa7.2□□□□□ -1.26
DSC3-201ENST00000360428 TOMM22Q9NS69 142 aa7.2□□□□□ -1.26
DSC3-201ENST00000360428 FMN1Q68DA7 1419 aa7.2□□□□□ -1.26
DSC3-201ENST00000360428 CCP110O43303 1012 aa7.2□□□□□ -1.26
DSC3-201ENST00000360428 RDXP35241 583 aaKnown RBP7.2□□□□□ -1.26
DSC3-201ENST00000360428 MNS1Q8NEH6 495 aa7.2□□□□□ -1.26
DSC3-201ENST00000360428 CGNL1Q0VF96 1302 aa7.19□□□□□ -1.26
DSC3-201ENST00000360428 E9PSI1 815 aa7.19□□□□□ -1.26
DSC3-201ENST00000360428 AAMPQ13685 434 aa7.19□□□□□ -1.26
DSC3-201ENST00000360428 DHX8Q14562 1220 aaKnown RBP7.19□□□□□ -1.26
DSC3-201ENST00000360428 RNF20Q5VTR2 975 aa7.19□□□□□ -1.26
DSC3-201ENST00000360428 ZKSCAN1P17029 563 aaPredicted RBP7.19□□□□□ -1.26
DSC3-201ENST00000360428 RILPL2Q969X0 211 aa7.19□□□□□ -1.26
DSC3-201ENST00000360428 NAT10Q9H0A0 1025 aaKnown RBP7.19□□□□□ -1.26
DSC3-201ENST00000360428 PAK3O75914 559 aaPredicted RBP7.19□□□□□ -1.26
DSC3-201ENST00000360428 CCDC173Q0VFZ6 552 aa7.18□□□□□ -1.26
DSC3-201ENST00000360428 MPHOSPH9Q99550 1183 aa7.18□□□□□ -1.26
DSC3-201ENST00000360428 ZKSCAN2Q63HK3 967 aa7.18□□□□□ -1.26
DSC3-201ENST00000360428 NOL10Q9BSC4 688 aaKnown RBP7.18□□□□□ -1.26
DSC3-201ENST00000360428 TCEAL9Q9UHQ7 104 aa7.18□□□□□ -1.26
DSC3-201ENST00000360428 ANKRD45Q5TZF3 282 aa7.18□□□□□ -1.26
DSC3-201ENST00000360428 FOXD4L5Q5VV16 416 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms