RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 RAD21O60216 631 aa13.85□□□□□ -0.19
COL11A1-202ENST00000358392 FAM184AQ8NB25 1140 aa13.84□□□□□ -0.19
COL11A1-202ENST00000358392 KANK1Q14678 1352 aa13.84□□□□□ -0.19
COL11A1-202ENST00000358392 SPAG9O60271 1321 aaKnown RBP13.84□□□□□ -0.19
COL11A1-202ENST00000358392 DDX11L8A8MPP1 907 aa13.84□□□□□ -0.19
COL11A1-202ENST00000358392 BECN2A8MW95 431 aa13.83□□□□□ -0.19
COL11A1-202ENST00000358392 ROCK2O75116 1388 aaKnown RBP13.83□□□□□ -0.2
COL11A1-202ENST00000358392 LTV1Q96GA3 475 aaPredicted RBP13.83□□□□□ -0.2
COL11A1-202ENST00000358392 HMMRO75330 724 aa13.82□□□□□ -0.2
COL11A1-202ENST00000358392 GPS2Q13227 327 aa13.82□□□□□ -0.2
COL11A1-202ENST00000358392 CCDC70Q6NSX1 233 aa13.82□□□□□ -0.2
COL11A1-202ENST00000358392 TPM2P07951 284 aa13.81□□□□□ -0.2
COL11A1-202ENST00000358392 RRP7AQ9Y3A4 280 aaKnown RBP13.81□□□□□ -0.2
COL11A1-202ENST00000358392 EIF4G1Q04637 1599 aaKnown RBP13.81□□□□□ -0.2
COL11A1-202ENST00000358392 FOSBP53539 338 aa13.8□□□□□ -0.2
COL11A1-202ENST00000358392 NUTM2DQ5VT03 806 aaPredicted RBP13.8□□□□□ -0.2
COL11A1-202ENST00000358392 GGT6Q6P531 493 aa13.8□□□□□ -0.2
COL11A1-202ENST00000358392 CCNB3Q8WWL7 1395 aa13.8□□□□□ -0.2
COL11A1-202ENST00000358392 RRP12Q5JTH9 1297 aaKnown RBP13.8□□□□□ -0.2
COL11A1-202ENST00000358392 TPM1P09493 284 aa13.79□□□□□ -0.2
COL11A1-202ENST00000358392 TRHP20396 242 aaPredicted RBP13.79□□□□□ -0.2
COL11A1-202ENST00000358392 PLIN1O60240 522 aa13.79□□□□□ -0.2
COL11A1-202ENST00000358392 GSE1Q14687 1217 aa13.79□□□□□ -0.2
COL11A1-202ENST00000358392 BCL2L13Q9BXK5 485 aa13.79□□□□□ -0.2
COL11A1-202ENST00000358392 ANKRD45Q5TZF3 282 aa13.79□□□□□ -0.2
COL11A1-202ENST00000358392 CENPJQ9HC77 1338 aaPredicted RBP13.79□□□□□ -0.2
COL11A1-202ENST00000358392 HOMER1Q86YM7 354 aa13.79□□□□□ -0.2
COL11A1-202ENST00000358392 AKAP17AQ02040 695 aaKnown RBP13.77□□□□□ -0.2
COL11A1-202ENST00000358392 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.77□□□□□ -0.21
COL11A1-202ENST00000358392 BAZ1BQ9UIG0 1483 aaKnown RBP13.77□□□□□ -0.21
COL11A1-202ENST00000358392 TEX35Q5T0J7 233 aa13.76□□□□□ -0.21
COL11A1-202ENST00000358392 NUTM2FA1L443 756 aa13.76□□□□□ -0.21
COL11A1-202ENST00000358392 ELL2O00472 640 aaPredicted RBP13.76□□□□□ -0.21
COL11A1-202ENST00000358392 HDGFP51858 240 aaKnown RBP13.76□□□□□ -0.21
COL11A1-202ENST00000358392 GTF2E1P29083 439 aaPredicted RBP13.76□□□□□ -0.21
COL11A1-202ENST00000358392 PKD2Q13563 968 aa13.76□□□□□ -0.21
COL11A1-202ENST00000358392 TCEAL9Q9UHQ7 104 aa13.76□□□□□ -0.21
COL11A1-202ENST00000358392 KRI1Q8N9T8 703 aaKnown RBP13.76□□□□□ -0.21
COL11A1-202ENST00000358392 NGEFQ8N5V2 710 aa13.75□□□□□ -0.21
COL11A1-202ENST00000358392 SKIDA1Q1XH10 827 aa13.75□□□□□ -0.21
COL11A1-202ENST00000358392 NAP1L1P55209 391 aaKnown RBP13.75□□□□□ -0.21
COL11A1-202ENST00000358392 KIF3AQ9Y496 699 aa13.75□□□□□ -0.21
COL11A1-202ENST00000358392 RALBP1Q15311 655 aa13.74□□□□□ -0.21
COL11A1-202ENST00000358392 CNKSR2Q8WXI2 1034 aa13.73□□□□□ -0.21
COL11A1-202ENST00000358392 RUFY1Q96T51 708 aa13.72□□□□□ -0.21
COL11A1-202ENST00000358392 ANO2Q9NQ90 1003 aa13.72□□□□□ -0.21
COL11A1-202ENST00000358392 PDE4AP27815 886 aa13.71□□□□□ -0.21
COL11A1-202ENST00000358392 MAP7D2Q96T17 732 aa13.71□□□□□ -0.21
COL11A1-202ENST00000358392 KDM4AO75164 1064 aa13.71□□□□□ -0.22
COL11A1-202ENST00000358392 BICD2Q8TD16 824 aa13.71□□□□□ -0.22
COL11A1-202ENST00000358392 NECTIN2Q92692 538 aa13.71□□□□□ -0.22
COL11A1-202ENST00000358392 AMPHP49418 695 aa13.71□□□□□ -0.22
COL11A1-202ENST00000358392 SAMD1Q6SPF0 538 aaPredicted RBP13.7□□□□□ -0.22
COL11A1-202ENST00000358392 DHX37Q8IY37 1157 aaKnown RBP13.7□□□□□ -0.22
COL11A1-202ENST00000358392 TTLL5Q6EMB2 1281 aa13.7□□□□□ -0.22
COL11A1-202ENST00000358392 SYNE3Q6ZMZ3 975 aa13.7□□□□□ -0.22
COL11A1-202ENST00000358392 IPO7O95373 1038 aaKnown RBP13.7□□□□□ -0.22
COL11A1-202ENST00000358392 SKOR2Q2VWA4 1001 aaPredicted RBP13.7□□□□□ -0.22
COL11A1-202ENST00000358392 TRIM29Q14134 588 aa13.7□□□□□ -0.22
COL11A1-202ENST00000358392 FAM161AQ3B820 660 aa13.7□□□□□ -0.22
COL11A1-202ENST00000358392 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.7□□□□□ -0.22
COL11A1-202ENST00000358392 CRBNQ96SW2 442 aa13.69□□□□□ -0.22
COL11A1-202ENST00000358392 PLCD4Q9BRC7 762 aa13.69□□□□□ -0.22
COL11A1-202ENST00000358392 IFT57Q9NWB7 429 aa13.69□□□□□ -0.22
COL11A1-202ENST00000358392 APPP05067 770 aa13.69□□□□□ -0.22
COL11A1-202ENST00000358392 DHX16O60231 1041 aaKnown RBP13.69□□□□□ -0.22
COL11A1-202ENST00000358392 SETD5Q9C0A6 1442 aa13.69□□□□□ -0.22
COL11A1-202ENST00000358392 AK7Q96M32 723 aa13.68□□□□□ -0.22
COL11A1-202ENST00000358392 ATP6V1DQ9Y5K8 247 aa13.68□□□□□ -0.22
COL11A1-202ENST00000358392 DIAPH3Q9NSV4 1193 aa13.68□□□□□ -0.22
COL11A1-202ENST00000358392 EXOC6Q8TAG9 804 aa13.68□□□□□ -0.22
COL11A1-202ENST00000358392 TRIM34Q9BYJ4 488 aa13.67□□□□□ -0.22
COL11A1-202ENST00000358392 CTDP1Q9Y5B0 961 aaPredicted RBP13.67□□□□□ -0.22
COL11A1-202ENST00000358392 NGDNQ8NEJ9 315 aaKnown RBP13.67□□□□□ -0.22
COL11A1-202ENST00000358392 CEP164Q9UPV0 1460 aa13.66□□□□□ -0.22
COL11A1-202ENST00000358392 MSH5O43196 834 aa13.66□□□□□ -0.22
COL11A1-202ENST00000358392 R3HCC1Q9Y3T6 440 aaKnown RBP13.66□□□□□ -0.22
COL11A1-202ENST00000358392 VPS37CA5D8V6 355 aaPredicted RBP13.66□□□□□ -0.22
COL11A1-202ENST00000358392 NOM1Q5C9Z4 860 aaKnown RBP13.66□□□□□ -0.22
COL11A1-202ENST00000358392 MNS1Q8NEH6 495 aa13.66□□□□□ -0.22
COL11A1-202ENST00000358392 KIF27Q86VH2 1401 aa13.65□□□□□ -0.22
COL11A1-202ENST00000358392 ANKRD20A12PQ8NF67 263 aa13.65□□□□□ -0.22
COL11A1-202ENST00000358392 CENPQQ7L2Z9 268 aaPredicted RBP13.65□□□□□ -0.22
COL11A1-202ENST00000358392 PDILTQ8N807 584 aa13.65□□□□□ -0.22
COL11A1-202ENST00000358392 HDAC5Q9UQL6 1122 aa13.65□□□□□ -0.22
COL11A1-202ENST00000358392 EEA1Q15075 1411 aa13.65□□□□□ -0.22
COL11A1-202ENST00000358392 EIF2S2P20042 333 aaKnown RBP13.65□□□□□ -0.22
COL11A1-202ENST00000358392 CT47A1Q5JQC4 288 aaPredicted RBP13.65□□□□□ -0.22
COL11A1-202ENST00000358392 SASS6Q6UVJ0 657 aa13.65□□□□□ -0.22
COL11A1-202ENST00000358392 NFXL1Q6ZNB6 911 aa13.65□□□□□ -0.22
COL11A1-202ENST00000358392 COG6Q9Y2V7 657 aa13.64□□□□□ -0.23
COL11A1-202ENST00000358392 TNIKQ9UKE5 1360 aa13.64□□□□□ -0.23
COL11A1-202ENST00000358392 ZFYVE27Q5T4F4 411 aa13.64□□□□□ -0.23
COL11A1-202ENST00000358392 FAM43AQ8N2R8 423 aa13.63□□□□□ -0.23
COL11A1-202ENST00000358392 CPLX1O14810 134 aa13.63□□□□□ -0.23
COL11A1-202ENST00000358392 HSP90AB2PQ58FF8 381 aa13.63□□□□□ -0.23
COL11A1-202ENST00000358392 WRNQ14191 1432 aaPredicted RBP eCLIP13.63□□□□□ -0.23
COL11A1-202ENST00000358392 ODF2Q5BJF6 829 aa13.63□□□□□ -0.23
COL11A1-202ENST00000358392 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.63□□□□□ -0.23
COL11A1-202ENST00000358392 CCDC47Q96A33 483 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms