RNA–Protein interactions for RNA: ENST00000358385.10

ATL1-201, Transcript of atlastin GTPase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL1, Length 2,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-201ENST00000358385 NAP1L2Q9ULW6 460 aaPredicted RBP13.19□□□□□ -0.3
ATL1-201ENST00000358385 ABCC5O15440 1437 aa13.19□□□□□ -0.3
ATL1-201ENST00000358385 GPATCH8Q9UKJ3 1502 aaKnown RBP13.18□□□□□ -0.3
ATL1-201ENST00000358385 POGKQ9P215 609 aa13.18□□□□□ -0.3
ATL1-201ENST00000358385 SMG6Q86US8 1419 aaKnown RBP13.18□□□□□ -0.3
ATL1-201ENST00000358385 ZNF777Q9ULD5 760 aaPredicted RBP13.17□□□□□ -0.3
ATL1-201ENST00000358385 KDM6BO15054 1643 aa13.17□□□□□ -0.3
ATL1-201ENST00000358385 GCC2Q8IWJ2 1684 aa13.17□□□□□ -0.3
ATL1-201ENST00000358385 DNMT1P26358 1616 aaKnown RBP13.16□□□□□ -0.3
ATL1-201ENST00000358385 ADCY10Q96PN6 1610 aa13.16□□□□□ -0.3
ATL1-201ENST00000358385 GTF2E1P29083 439 aaPredicted RBP13.15□□□□□ -0.3
ATL1-201ENST00000358385 CHMP4BQ9H444 224 aaKnown RBP13.15□□□□□ -0.3
ATL1-201ENST00000358385 CAMSAP2Q08AD1 1489 aa13.15□□□□□ -0.3
ATL1-201ENST00000358385 MRS2Q9HD23 443 aa13.14□□□□□ -0.31
ATL1-201ENST00000358385 NUDCQ9Y266 331 aa13.14□□□□□ -0.31
ATL1-201ENST00000358385 ROCK1Q13464 1354 aa13.14□□□□□ -0.31
ATL1-201ENST00000358385 TPM2P07951 284 aa13.13□□□□□ -0.31
ATL1-201ENST00000358385 ITSN2Q9NZM3 1697 aa13.13□□□□□ -0.31
ATL1-201ENST00000358385 SHROOM2Q13796 1616 aa13.13□□□□□ -0.31
ATL1-201ENST00000358385 ERCC6L2Q5T890 1561 aa13.12□□□□□ -0.31
ATL1-201ENST00000358385 TONSLQ96HA7 1378 aa13.12□□□□□ -0.31
ATL1-201ENST00000358385 ARXQ96QS3 562 aa13.12□□□□□ -0.31
ATL1-201ENST00000358385 DENND4BO75064 1496 aaPredicted RBP13.12□□□□□ -0.31
ATL1-201ENST00000358385 ABCC10Q5T3U5 1492 aa13.12□□□□□ -0.31
ATL1-201ENST00000358385 PAXIP1Q6ZW49 1069 aaPredicted RBP13.1□□□□□ -0.31
ATL1-201ENST00000358385 MPHOSPH9Q99550 1183 aa13.1□□□□□ -0.31
ATL1-201ENST00000358385 CANXP27824 592 aaKnown RBP13.1□□□□□ -0.31
ATL1-201ENST00000358385 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
ATL1-201ENST00000358385 STAC3Q96MF2 364 aa13.09□□□□□ -0.31
ATL1-201ENST00000358385 XRCC6P12956 609 aaKnown RBP eCLIP13.09□□□□□ -0.31
ATL1-201ENST00000358385 FOXD1Q16676 465 aa13.08□□□□□ -0.32
ATL1-201ENST00000358385 ZHX1Q9UKY1 873 aaPredicted RBP13.08□□□□□ -0.32
ATL1-201ENST00000358385 CDC42BPAQ5VT25 1732 aa13.07□□□□□ -0.32
ATL1-201ENST00000358385 PANK2Q9BZ23 570 aa13.07□□□□□ -0.32
ATL1-201ENST00000358385 NCOA1Q15788 1441 aa13.07□□□□□ -0.32
ATL1-201ENST00000358385 EXOC6Q8TAG9 804 aa13.07□□□□□ -0.32
ATL1-201ENST00000358385 PRKRIP1Q9H875 184 aaPredicted RBP13.06□□□□□ -0.32
ATL1-201ENST00000358385 CLASP1Q7Z460 1538 aa13.06□□□□□ -0.32
ATL1-201ENST00000358385 IPO4Q8TEX9 1081 aaKnown RBP13.05□□□□□ -0.32
ATL1-201ENST00000358385 ESPNB1AK53 854 aa13.04□□□□□ -0.32
ATL1-201ENST00000358385 GOLGA6L3A6NEY3 463 aa13.04□□□□□ -0.32
ATL1-201ENST00000358385 CNGB1Q14028 1251 aaPredicted RBP13.04□□□□□ -0.32
ATL1-201ENST00000358385 SKAP1Q86WV1 359 aa13.04□□□□□ -0.32
ATL1-201ENST00000358385 SMAP1Q8IYB5 467 aaPredicted RBP13.04□□□□□ -0.32
ATL1-201ENST00000358385 ABCC2Q92887 1545 aa13.04□□□□□ -0.32
ATL1-201ENST00000358385 ADGRL2O95490 1459 aa13.03□□□□□ -0.32
ATL1-201ENST00000358385 SLC4A1APQ9BWU0 796 aaKnown RBP13.03□□□□□ -0.32
ATL1-201ENST00000358385 ANKRD30AQ9BXX3 1397 aa13.03□□□□□ -0.32
ATL1-201ENST00000358385 HNRNPMP52272 730 aaKnown RBP eCLIP13.03□□□□□ -0.32
ATL1-201ENST00000358385 CROCC2H7BZ55 1655 aa13.03□□□□□ -0.32
ATL1-201ENST00000358385 ERBB4Q15303 1308 aa13.02□□□□□ -0.32
ATL1-201ENST00000358385 CNTLNQ9NXG0 1405 aa13.02□□□□□ -0.33
ATL1-201ENST00000358385 KDM5BQ9UGL1 1544 aa13.02□□□□□ -0.33
ATL1-201ENST00000358385 ADGBQ8N7X0 1667 aa13.02□□□□□ -0.33
ATL1-201ENST00000358385 KIAA1211Q6ZU35 1233 aa13.01□□□□□ -0.33
ATL1-201ENST00000358385 C9orf84Q5VXU9 1444 aa13.01□□□□□ -0.33
ATL1-201ENST00000358385 TSPY4P0CV99 314 aa13□□□□□ -0.33
ATL1-201ENST00000358385 TSPY10P0CW01 314 aa13□□□□□ -0.33
ATL1-201ENST00000358385 ANKRD30BQ9BXX2 1392 aa13□□□□□ -0.33
ATL1-201ENST00000358385 RSPH4AQ5TD94 716 aa13□□□□□ -0.33
ATL1-201ENST00000358385 FSD2A1L4K1 749 aa12.99□□□□□ -0.33
ATL1-201ENST00000358385 ANKRD50Q9ULJ7 1429 aa12.99□□□□□ -0.33
ATL1-201ENST00000358385 RRP1P56182 461 aaKnown RBP12.99□□□□□ -0.33
ATL1-201ENST00000358385 PZPP20742 1482 aa12.99□□□□□ -0.33
ATL1-201ENST00000358385 SHANK2Q9UPX8 1470 aa12.99□□□□□ -0.33
ATL1-201ENST00000358385 ZNF326Q5BKZ1 582 aaKnown RBP12.98□□□□□ -0.33
ATL1-201ENST00000358385 MAP7D2Q96T17 732 aa12.98□□□□□ -0.33
ATL1-201ENST00000358385 MBD5Q9P267 1494 aa12.98□□□□□ -0.33
ATL1-201ENST00000358385 TTC37Q6PGP7 1564 aa12.98□□□□□ -0.33
ATL1-201ENST00000358385 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.98□□□□□ -0.33
ATL1-201ENST00000358385 SENP3-EIF4A1A0A087X0R7 540 aa12.98□□□□□ -0.33
ATL1-201ENST00000358385 NCLP19338 710 aaKnown RBP12.98□□□□□ -0.33
ATL1-201ENST00000358385 PRDM10Q9NQV6 1147 aa12.98□□□□□ -0.33
ATL1-201ENST00000358385 PREX2Q70Z35 1606 aa12.98□□□□□ -0.33
ATL1-201ENST00000358385 SAMD9LQ8IVG5 1584 aa12.98□□□□□ -0.33
ATL1-201ENST00000358385 CDC42BPBQ9Y5S2 1711 aa12.97□□□□□ -0.33
ATL1-201ENST00000358385 L3MBTL2Q969R5 705 aa12.97□□□□□ -0.33
ATL1-201ENST00000358385 FAM13BQ9NYF5 915 aa12.96□□□□□ -0.33
ATL1-201ENST00000358385 ARHGEF5Q12774 1597 aa12.96□□□□□ -0.34
ATL1-201ENST00000358385 ARHGAP5Q13017 1502 aa12.95□□□□□ -0.34
ATL1-201ENST00000358385 RIPK4P57078 832 aa12.95□□□□□ -0.34
ATL1-201ENST00000358385 MYH16Q9H6N6 1097 aa12.95□□□□□ -0.34
ATL1-201ENST00000358385 UHRF1BP1LA0JNW5 1464 aa12.95□□□□□ -0.34
ATL1-201ENST00000358385 RPRD2Q5VT52 1461 aaKnown RBP12.95□□□□□ -0.34
ATL1-201ENST00000358385 CCDC141Q6ZP82 1450 aa12.95□□□□□ -0.34
ATL1-201ENST00000358385 HSPA5P11021 654 aaKnown RBP12.94□□□□□ -0.34
ATL1-201ENST00000358385 KIF15Q9NS87 1388 aa12.94□□□□□ -0.34
ATL1-201ENST00000358385 ZCCHC11Q5TAX3 1644 aaKnown RBP12.94□□□□□ -0.34
ATL1-201ENST00000358385 PKD2Q13563 968 aa12.94□□□□□ -0.34
ATL1-201ENST00000358385 ARID3AQ99856 593 aa12.94□□□□□ -0.34
ATL1-201ENST00000358385 GZF1Q9H116 711 aaPredicted RBP12.93□□□□□ -0.34
ATL1-201ENST00000358385 SYCP2Q9BX26 1530 aa12.93□□□□□ -0.34
ATL1-201ENST00000358385 UTP14CQ5TAP6 766 aaKnown RBP12.93□□□□□ -0.34
ATL1-201ENST00000358385 TRIM44Q96DX7 344 aaPredicted RBP12.93□□□□□ -0.34
ATL1-201ENST00000358385 NUP155O75694 1391 aa12.93□□□□□ -0.34
ATL1-201ENST00000358385 DMTNQ08495 405 aa12.92□□□□□ -0.34
ATL1-201ENST00000358385 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
ATL1-201ENST00000358385 TMEM51Q9NW97 253 aa12.92□□□□□ -0.34
ATL1-201ENST00000358385 KIAA1107Q9UPP5 1409 aa12.92□□□□□ -0.34
ATL1-201ENST00000358385 MRE11P49959 708 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms