RNA–Protein interactions for RNA: ENST00000357903.7

APP-204, Transcript of amyloid beta precursor protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APP, Length 3,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-204ENST00000357903 STAG3Q9UJ98 1225 aa21.53■■□□□ 1.04
APP-204ENST00000357903 KANK1Q14678 1352 aa21.52■■□□□ 1.04
APP-204ENST00000357903 WDR43Q15061 677 aaKnown RBP eCLIP21.52■■□□□ 1.04
APP-204ENST00000357903 ABCC10Q5T3U5 1492 aa21.52■■□□□ 1.04
APP-204ENST00000357903 ABCA8O94911 1581 aa21.52■■□□□ 1.03
APP-204ENST00000357903 RAPGEF3O95398 923 aa21.51■■□□□ 1.03
APP-204ENST00000357903 RBM19Q9Y4C8 960 aaKnown RBP21.51■■□□□ 1.03
APP-204ENST00000357903 KDM5BQ9UGL1 1544 aa21.51■■□□□ 1.03
APP-204ENST00000357903 TRAK1Q9UPV9 953 aa21.51■■□□□ 1.03
APP-204ENST00000357903 TRAPPC8Q9Y2L5 1435 aa21.51■■□□□ 1.03
APP-204ENST00000357903 CFAP70Q5T0N1 1121 aa21.5■■□□□ 1.03
APP-204ENST00000357903 KTN1Q86UP2 1357 aaKnown RBP21.5■■□□□ 1.03
APP-204ENST00000357903 NEUROD2Q15784 382 aa21.5■■□□□ 1.03
APP-204ENST00000357903 STK26Q9P289 416 aa21.49■■□□□ 1.03
APP-204ENST00000357903 PPP4R2Q9NY27 417 aa21.49■■□□□ 1.03
APP-204ENST00000357903 ZBED9Q6R2W3 1325 aa21.49■■□□□ 1.03
APP-204ENST00000357903 CHD1O14646 1710 aa21.47■■□□□ 1.03
APP-204ENST00000357903 WASHC2CQ9Y4E1 1318 aa21.47■■□□□ 1.03
APP-204ENST00000357903 MBD5Q9P267 1494 aa21.46■■□□□ 1.03
APP-204ENST00000357903 TMEM132EQ6IEE7 984 aa21.46■■□□□ 1.03
APP-204ENST00000357903 MYBBP1AQ9BQG0 1328 aaKnown RBP21.45■■□□□ 1.02
APP-204ENST00000357903 RALBP1Q15311 655 aa21.44■■□□□ 1.02
APP-204ENST00000357903 NLRP13Q86W25 1043 aa21.44■■□□□ 1.02
APP-204ENST00000357903 NPM2Q86SE8 214 aaKnown RBP21.44■■□□□ 1.02
APP-204ENST00000357903 PNISRQ8TF01 805 aaKnown RBP21.44■■□□□ 1.02
APP-204ENST00000357903 CCDC146Q8IYE0 955 aa21.43■■□□□ 1.02
APP-204ENST00000357903 NUDCQ9Y266 331 aa21.42■■□□□ 1.02
APP-204ENST00000357903 CDC42BPAQ5VT25 1732 aa21.42■■□□□ 1.02
APP-204ENST00000357903 ADGRL2O95490 1459 aa21.42■■□□□ 1.02
APP-204ENST00000357903 FAM135AQ9P2D6 1515 aa21.42■■□□□ 1.02
APP-204ENST00000357903 CDCA7LQ96GN5 454 aa21.42■■□□□ 1.02
APP-204ENST00000357903 PLIN1O60240 522 aa21.41■■□□□ 1.02
APP-204ENST00000357903 SPATA31E1Q6ZUB1 1445 aa21.39■■□□□ 1.01
APP-204ENST00000357903 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.38■■□□□ 1.01
APP-204ENST00000357903 PLCH2O75038 1416 aa21.38■■□□□ 1.01
APP-204ENST00000357903 TTC37Q6PGP7 1564 aa21.37■■□□□ 1.01
APP-204ENST00000357903 SAMD9LQ8IVG5 1584 aa21.37■■□□□ 1.01
APP-204ENST00000357903 DISP3Q9P2K9 1392 aa21.36■■□□□ 1.01
APP-204ENST00000357903 ABCC2Q92887 1545 aa21.35■■□□□ 1.01
APP-204ENST00000357903 CDCA8Q53HL2 280 aa21.35■■□□□ 1.01
APP-204ENST00000357903 DHX29Q7Z478 1369 aaKnown RBP21.33■■□□□ 1.01
APP-204ENST00000357903 FANCAO15360 1455 aa21.32■■□□□ 1
APP-204ENST00000357903 RCAN3Q9UKA8 241 aa21.32■■□□□ 1
APP-204ENST00000357903 ARHGEF12Q9NZN5 1544 aa21.32■■□□□ 1
APP-204ENST00000357903 ADGRF5Q8IZF2 1346 aa21.31■■□□□ 1
APP-204ENST00000357903 SHANK2Q9UPX8 1470 aa21.31■■□□□ 1
APP-204ENST00000357903 ADGBQ8N7X0 1667 aa21.31■■□□□ 1
APP-204ENST00000357903 ADAMTS8Q9UP79 889 aa21.3■■□□□ 1
APP-204ENST00000357903 ESF1Q9H501 851 aaKnown RBP21.3■■□□□ 1
APP-204ENST00000357903 ADGRL1O94910 1474 aa21.3■■□□□ 1
APP-204ENST00000357903 CANXP27824 592 aaKnown RBP21.29■■□□□ 1
APP-204ENST00000357903 ARID4BQ4LE39 1312 aaPredicted RBP21.29■■□□□ 1
APP-204ENST00000357903 BCL11AQ9H165 835 aa21.29■■□□□ 1
APP-204ENST00000357903 TESK2Q96S53 571 aa21.28■■□□□ 1
APP-204ENST00000357903 PRAG1Q86YV5 1406 aa21.28■■□□□ 1
APP-204ENST00000357903 CFAP65Q6ZU64 1925 aaKnown RBP21.28■■□□□ 1
APP-204ENST00000357903 PPM1GO15355 546 aaPredicted RBP21.28■■□□□ 1
APP-204ENST00000357903 EXOC6Q8TAG9 804 aa21.28■■□□□ 1
APP-204ENST00000357903 RALGAPBQ86X10 1494 aa21.27■■□□□ 1
APP-204ENST00000357903 FAM69CQ0P6D2 419 aa21.26■□□□□ 0.99
APP-204ENST00000357903 ASXL2Q76L83 1435 aa21.26■□□□□ 0.99
APP-204ENST00000357903 ERBINQ96RT1 1412 aa21.26■□□□□ 0.99
APP-204ENST00000357903 SRPK2P78362 688 aaKnown RBP21.26■□□□□ 0.99
APP-204ENST00000357903 RRP7AQ9Y3A4 280 aaKnown RBP21.25■□□□□ 0.99
APP-204ENST00000357903 POGKQ9P215 609 aa21.25■□□□□ 0.99
APP-204ENST00000357903 A2MP01023 1474 aa21.24■□□□□ 0.99
APP-204ENST00000357903 MORC1Q86VD1 984 aa21.24■□□□□ 0.99
APP-204ENST00000357903 CDC42BPBQ9Y5S2 1711 aa21.24■□□□□ 0.99
APP-204ENST00000357903 SLC12A5Q9H2X9 1139 aa21.23■□□□□ 0.99
APP-204ENST00000357903 PLA2R1Q13018 1463 aa21.23■□□□□ 0.99
APP-204ENST00000357903 ADCY10Q96PN6 1610 aa21.22■□□□□ 0.99
APP-204ENST00000357903 CD109Q6YHK3 1445 aa21.21■□□□□ 0.99
APP-204ENST00000357903 APAF1O14727 1248 aa21.2■□□□□ 0.98
APP-204ENST00000357903 BCORL1Q5H9F3 1711 aa21.2■□□□□ 0.98
APP-204ENST00000357903 BRD4O60885 1362 aaPredicted RBP21.2■□□□□ 0.98
APP-204ENST00000357903 PPP2R1AP30153 589 aa21.2■□□□□ 0.98
APP-204ENST00000357903 WDR7Q9Y4E6 1490 aa21.19■□□□□ 0.98
APP-204ENST00000357903 DUOX2Q9NRD8 1548 aa21.18■□□□□ 0.98
APP-204ENST00000357903 PER1O15534 1290 aaPredicted RBP21.18■□□□□ 0.98
APP-204ENST00000357903 PREX2Q70Z35 1606 aa21.18■□□□□ 0.98
APP-204ENST00000357903 U2SURPO15042 1029 aaKnown RBP21.17■□□□□ 0.98
APP-204ENST00000357903 MINK1Q8N4C8 1332 aaPredicted RBP21.17■□□□□ 0.98
APP-204ENST00000357903 UHRF1BP1Q6BDS2 1440 aa21.17■□□□□ 0.98
APP-204ENST00000357903 CABP2Q9NPB3 220 aa21.17■□□□□ 0.98
APP-204ENST00000357903 SKAP1Q86WV1 359 aa21.16■□□□□ 0.98
APP-204ENST00000357903 FRAT1Q92837 279 aaPredicted RBP21.16■□□□□ 0.98
APP-204ENST00000357903 ARHGEF5Q12774 1597 aa21.16■□□□□ 0.98
APP-204ENST00000357903 RRP1P56182 461 aaKnown RBP21.15■□□□□ 0.98
APP-204ENST00000357903 NBR1Q14596 966 aa21.15■□□□□ 0.98
APP-204ENST00000357903 MYO5CQ9NQX4 1742 aa21.14■□□□□ 0.98
APP-204ENST00000357903 CENPJQ9HC77 1338 aaPredicted RBP21.14■□□□□ 0.98
APP-204ENST00000357903 EIF3AQ14152 1382 aaKnown RBP21.14■□□□□ 0.98
APP-204ENST00000357903 CROCC2H7BZ55 1655 aa21.14■□□□□ 0.98
APP-204ENST00000357903 ZCCHC11Q5TAX3 1644 aaKnown RBP21.14■□□□□ 0.97
APP-204ENST00000357903 NUTM2FA1L443 756 aa21.13■□□□□ 0.97
APP-204ENST00000357903 FBXO31Q5XUX0 539 aaPredicted RBP21.13■□□□□ 0.97
APP-204ENST00000357903 PLEKHG5O94827 1062 aa21.12■□□□□ 0.97
APP-204ENST00000357903 KDM5CP41229 1560 aa21.11■□□□□ 0.97
APP-204ENST00000357903 ANP32AP39687 249 aaKnown RBP21.11■□□□□ 0.97
APP-204ENST00000357903 ANP32EQ9BTT0 268 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms