RNA–Protein interactions for RNA: ENST00000357881.8

RFX4-202, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 2,565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-202ENST00000357881 NAP1L5Q96NT1 182 aaPredicted RBP12.12□□□□□ -0.47
RFX4-202ENST00000357881 KCNH8Q96L42 1107 aa12.12□□□□□ -0.47
RFX4-202ENST00000357881 CPS1P31327 1500 aa12.1□□□□□ -0.47
RFX4-202ENST00000357881 KDM5CP41229 1560 aa12.1□□□□□ -0.47
RFX4-202ENST00000357881 RAPGEF3O95398 923 aa12.09□□□□□ -0.47
RFX4-202ENST00000357881 TRAPPC8Q9Y2L5 1435 aa12.09□□□□□ -0.47
RFX4-202ENST00000357881 FKBP8Q14318 412 aa12.08□□□□□ -0.48
RFX4-202ENST00000357881 NAP1L2Q9ULW6 460 aaPredicted RBP12.07□□□□□ -0.48
RFX4-202ENST00000357881 ZNF326Q5BKZ1 582 aaKnown RBP12.07□□□□□ -0.48
RFX4-202ENST00000357881 MYO5CQ9NQX4 1742 aa12.07□□□□□ -0.48
RFX4-202ENST00000357881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.06□□□□□ -0.48
RFX4-202ENST00000357881 ZNF518AQ6AHZ1 1483 aa12.04□□□□□ -0.48
RFX4-202ENST00000357881 PKD2Q13563 968 aa12.04□□□□□ -0.48
RFX4-202ENST00000357881 MIER1Q8N108 512 aa12.04□□□□□ -0.48
RFX4-202ENST00000357881 SUPT6HQ7KZ85 1726 aaKnown RBP12.03□□□□□ -0.48
RFX4-202ENST00000357881 TPRNQ4KMQ1 711 aa12.02□□□□□ -0.48
RFX4-202ENST00000357881 PLCH2O75038 1416 aa12.02□□□□□ -0.49
RFX4-202ENST00000357881 PRXQ9BXM0 1461 aa12.02□□□□□ -0.49
RFX4-202ENST00000357881 DIP2CQ9Y2E4 1556 aa12.02□□□□□ -0.49
RFX4-202ENST00000357881 CAMSAP1Q5T5Y3 1602 aa12.02□□□□□ -0.49
RFX4-202ENST00000357881 FAM135AQ9P2D6 1515 aa12.01□□□□□ -0.49
RFX4-202ENST00000357881 PLCB2Q00722 1185 aa12.01□□□□□ -0.49
RFX4-202ENST00000357881 PTPRKQ15262 1439 aa12.01□□□□□ -0.49
RFX4-202ENST00000357881 TCOF1Q13428 1488 aaKnown RBP12.01□□□□□ -0.49
RFX4-202ENST00000357881 NBR1Q14596 966 aa12.01□□□□□ -0.49
RFX4-202ENST00000357881 CHMP4BQ9H444 224 aaKnown RBP12.01□□□□□ -0.49
RFX4-202ENST00000357881 NUP153P49790 1475 aaKnown RBP12.01□□□□□ -0.49
RFX4-202ENST00000357881 MLH3Q9UHC1 1453 aa12.01□□□□□ -0.49
RFX4-202ENST00000357881 POLR1AO95602 1720 aaPredicted RBP12□□□□□ -0.49
RFX4-202ENST00000357881 MYO3AQ8NEV4 1616 aa11.98□□□□□ -0.49
RFX4-202ENST00000357881 SYNMO15061 1565 aa11.98□□□□□ -0.49
RFX4-202ENST00000357881 CNKSR2Q8WXI2 1034 aa11.97□□□□□ -0.49
RFX4-202ENST00000357881 BCANQ96GW7 911 aa11.97□□□□□ -0.49
RFX4-202ENST00000357881 IRX6P78412 446 aaPredicted RBP11.96□□□□□ -0.49
RFX4-202ENST00000357881 SCAPERQ9BY12 1400 aa11.96□□□□□ -0.49
RFX4-202ENST00000357881 PLEKHD1A6NEE1 506 aa11.95□□□□□ -0.5
RFX4-202ENST00000357881 UBAP1LF5GYI3 381 aa11.95□□□□□ -0.5
RFX4-202ENST00000357881 C11orf95C9JLR9 678 aaPredicted RBP11.95□□□□□ -0.5
RFX4-202ENST00000357881 BBXQ8WY36 941 aaPredicted RBP11.95□□□□□ -0.5
RFX4-202ENST00000357881 CEP170BQ9Y4F5 1589 aaPredicted RBP11.94□□□□□ -0.5
RFX4-202ENST00000357881 ABCA6Q8N139 1617 aa11.94□□□□□ -0.5
RFX4-202ENST00000357881 TOM1O60784 492 aa11.94□□□□□ -0.5
RFX4-202ENST00000357881 RNF17Q9BXT8 1623 aaKnown RBP11.93□□□□□ -0.5
RFX4-202ENST00000357881 ITSN2Q9NZM3 1697 aa11.92□□□□□ -0.5
RFX4-202ENST00000357881 DEPDC5O75140 1603 aa11.92□□□□□ -0.5
RFX4-202ENST00000357881 ZNF316A6NFI3 1004 aaPredicted RBP11.92□□□□□ -0.5
RFX4-202ENST00000357881 IPO4Q8TEX9 1081 aaKnown RBP11.91□□□□□ -0.5
RFX4-202ENST00000357881 ZFP91Q96JP5 570 aaPredicted RBP11.91□□□□□ -0.5
RFX4-202ENST00000357881 KIF14Q15058 1648 aa11.9□□□□□ -0.5
RFX4-202ENST00000357881 GTF2E1P29083 439 aaPredicted RBP11.9□□□□□ -0.5
RFX4-202ENST00000357881 EFCAB2Q5VUJ9 269 aa11.9□□□□□ -0.5
RFX4-202ENST00000357881 CCER1Q8TC90 406 aaPredicted RBP11.9□□□□□ -0.5
RFX4-202ENST00000357881 RTL5Q5HYW3 569 aaPredicted RBP11.89□□□□□ -0.51
RFX4-202ENST00000357881 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.88□□□□□ -0.51
RFX4-202ENST00000357881 A2ML1A8K2U0 1454 aa11.88□□□□□ -0.51
RFX4-202ENST00000357881 ESF1Q9H501 851 aaKnown RBP11.88□□□□□ -0.51
RFX4-202ENST00000357881 HSP90AA2PQ14568 343 aaPredicted RBP11.86□□□□□ -0.51
RFX4-202ENST00000357881 SHANK2Q9UPX8 1470 aa11.86□□□□□ -0.51
RFX4-202ENST00000357881 BCCIPQ9P287 314 aaKnown RBP eCLIP11.86□□□□□ -0.51
RFX4-202ENST00000357881 PREX2Q70Z35 1606 aa11.86□□□□□ -0.51
RFX4-202ENST00000357881 ABCC1P33527 1531 aa11.86□□□□□ -0.51
RFX4-202ENST00000357881 KIDINS220Q9ULH0 1771 aa11.85□□□□□ -0.51
RFX4-202ENST00000357881 RRP9O43818 475 aaKnown RBP11.85□□□□□ -0.51
RFX4-202ENST00000357881 MED14O60244 1454 aa11.85□□□□□ -0.51
RFX4-202ENST00000357881 FBXO3Q9UK99 471 aa11.84□□□□□ -0.51
RFX4-202ENST00000357881 PLXNC1O60486 1568 aa11.84□□□□□ -0.51
RFX4-202ENST00000357881 VWDEQ8N2E2 1590 aa11.84□□□□□ -0.51
RFX4-202ENST00000357881 PRDM4Q9UKN5 801 aa11.83□□□□□ -0.52
RFX4-202ENST00000357881 DNMT1P26358 1616 aaKnown RBP11.83□□□□□ -0.52
RFX4-202ENST00000357881 HSPA1LP34931 641 aa11.83□□□□□ -0.52
RFX4-202ENST00000357881 BRPF3Q9ULD4 1205 aa11.83□□□□□ -0.52
RFX4-202ENST00000357881 NEURL4Q96JN8 1562 aa11.82□□□□□ -0.52
RFX4-202ENST00000357881 MLECQ14165 292 aa11.82□□□□□ -0.52
RFX4-202ENST00000357881 NOP58Q9Y2X3 529 aaKnown RBP11.82□□□□□ -0.52
RFX4-202ENST00000357881 ALKQ9UM73 1620 aa11.82□□□□□ -0.52
RFX4-202ENST00000357881 ADGBQ8N7X0 1667 aa11.82□□□□□ -0.52
RFX4-202ENST00000357881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.81□□□□□ -0.52
RFX4-202ENST00000357881 CDK11BP21127 795 aaKnown RBP11.81□□□□□ -0.52
RFX4-202ENST00000357881 CDK11AQ9UQ88 783 aaPredicted RBP11.81□□□□□ -0.52
RFX4-202ENST00000357881 CDC42BPBQ9Y5S2 1711 aa11.81□□□□□ -0.52
RFX4-202ENST00000357881 CLTCQ00610 1675 aaKnown RBP11.81□□□□□ -0.52
RFX4-202ENST00000357881 CLIP1P30622 1438 aa11.81□□□□□ -0.52
RFX4-202ENST00000357881 SECISBP2LQ93073 1101 aaKnown RBP11.81□□□□□ -0.52
RFX4-202ENST00000357881 ZNF335Q9H4Z2 1342 aaPredicted RBP11.81□□□□□ -0.52
RFX4-202ENST00000357881 STAC3Q96MF2 364 aa11.8□□□□□ -0.52
RFX4-202ENST00000357881 ARHGAP5Q13017 1502 aa11.8□□□□□ -0.52
RFX4-202ENST00000357881 CEBPAP49715 358 aaPredicted RBP11.8□□□□□ -0.52
RFX4-202ENST00000357881 FOXD4L1Q9NU39 408 aa11.8□□□□□ -0.52
RFX4-202ENST00000357881 HSP90B1P14625 803 aaKnown RBP11.79□□□□□ -0.52
RFX4-202ENST00000357881 TEX2Q8IWB9 1127 aa11.79□□□□□ -0.52
RFX4-202ENST00000357881 CANXP27824 592 aaKnown RBP11.79□□□□□ -0.52
RFX4-202ENST00000357881 EEA1Q15075 1411 aa11.79□□□□□ -0.52
RFX4-202ENST00000357881 WASHC2CQ9Y4E1 1318 aa11.79□□□□□ -0.52
RFX4-202ENST00000357881 ITGAEP38570 1179 aa11.78□□□□□ -0.52
RFX4-202ENST00000357881 ZMYM3Q14202 1370 aa11.78□□□□□ -0.52
RFX4-202ENST00000357881 CDK13Q14004 1512 aaKnown RBP11.77□□□□□ -0.52
RFX4-202ENST00000357881 TROQ12816 1431 aaPredicted RBP11.77□□□□□ -0.53
RFX4-202ENST00000357881 CHRM1P11229 460 aaPredicted RBP11.77□□□□□ -0.53
RFX4-202ENST00000357881 HNRNPUL2Q1KMD3 747 aaKnown RBP11.77□□□□□ -0.53
RFX4-202ENST00000357881 IQGAP1P46940 1657 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms