RNA–Protein interactions for RNA: ENST00000357164.3

GM2A-201, Transcript of GM2 ganglioside activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GM2A, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-201ENST00000357164 MYOM1P52179 1685 aa11.38□□□□□ -0.59
GM2A-201ENST00000357164 PRDM15P57071 1507 aaPredicted RBP11.38□□□□□ -0.59
GM2A-201ENST00000357164 ABCC2Q92887 1545 aa11.38□□□□□ -0.59
GM2A-201ENST00000357164 TARBP1Q13395 1621 aaKnown RBP11.37□□□□□ -0.59
GM2A-201ENST00000357164 CADPSQ9ULU8 1353 aa11.37□□□□□ -0.59
GM2A-201ENST00000357164 RAD54L2Q9Y4B4 1467 aa11.37□□□□□ -0.59
GM2A-201ENST00000357164 USP47Q96K76 1375 aa11.36□□□□□ -0.59
GM2A-201ENST00000357164 CCDC144AA2RUR9 1427 aa11.35□□□□□ -0.59
GM2A-201ENST00000357164 ANTXR1Q9H6X2 564 aa11.35□□□□□ -0.59
GM2A-201ENST00000357164 KIF15Q9NS87 1388 aa11.34□□□□□ -0.59
GM2A-201ENST00000357164 PTPRGP23470 1445 aa11.34□□□□□ -0.59
GM2A-201ENST00000357164 FSD2A1L4K1 749 aa11.34□□□□□ -0.59
GM2A-201ENST00000357164 EIF5BO60841 1220 aaKnown RBP11.34□□□□□ -0.59
GM2A-201ENST00000357164 DDRGK1Q96HY6 314 aa11.34□□□□□ -0.59
GM2A-201ENST00000357164 MTUS2Q5JR59 1369 aa11.34□□□□□ -0.59
GM2A-201ENST00000357164 PDE3BQ13370 1112 aa11.33□□□□□ -0.6
GM2A-201ENST00000357164 ZNF521Q96K83 1311 aa11.33□□□□□ -0.6
GM2A-201ENST00000357164 CDK13Q14004 1512 aaKnown RBP11.33□□□□□ -0.6
GM2A-201ENST00000357164 RTEL1-TNFRSF6BF6WH68 1400 aa11.33□□□□□ -0.6
GM2A-201ENST00000357164 KIAA1107Q9UPP5 1409 aa11.32□□□□□ -0.6
GM2A-201ENST00000357164 IQGAP1P46940 1657 aa11.32□□□□□ -0.6
GM2A-201ENST00000357164 NPM2Q86SE8 214 aaKnown RBP11.32□□□□□ -0.6
GM2A-201ENST00000357164 MYBBP1AQ9BQG0 1328 aaKnown RBP11.31□□□□□ -0.6
GM2A-201ENST00000357164 SKAP1Q86WV1 359 aa11.31□□□□□ -0.6
GM2A-201ENST00000357164 RCAN3Q9UKA8 241 aa11.31□□□□□ -0.6
GM2A-201ENST00000357164 PER1O15534 1290 aaPredicted RBP11.31□□□□□ -0.6
GM2A-201ENST00000357164 COL17A1Q9UMD9 1497 aaPredicted RBP11.31□□□□□ -0.6
GM2A-201ENST00000357164 FRAT2O75474 233 aaPredicted RBP11.31□□□□□ -0.6
GM2A-201ENST00000357164 FANCD2Q9BXW9 1451 aa11.3□□□□□ -0.6
GM2A-201ENST00000357164 CENPJQ9HC77 1338 aaPredicted RBP11.29□□□□□ -0.6
GM2A-201ENST00000357164 ZMYM3Q14202 1370 aa11.29□□□□□ -0.6
GM2A-201ENST00000357164 IQGAP2Q13576 1575 aa11.29□□□□□ -0.6
GM2A-201ENST00000357164 GPRASP1Q5JY77 1395 aa11.28□□□□□ -0.6
GM2A-201ENST00000357164 URB2Q14146 1524 aaKnown RBP11.28□□□□□ -0.6
GM2A-201ENST00000357164 ADAMTS12P58397 1594 aa11.28□□□□□ -0.6
GM2A-201ENST00000357164 ZMYND15Q9H091 742 aa11.27□□□□□ -0.6
GM2A-201ENST00000357164 SHPRHQ149N8 1683 aa11.27□□□□□ -0.61
GM2A-201ENST00000357164 CLCN1P35523 988 aa11.27□□□□□ -0.61
GM2A-201ENST00000357164 TRMT2AQ8IZ69 625 aaKnown RBP11.27□□□□□ -0.61
GM2A-201ENST00000357164 SHANK2Q9UPX8 1470 aa11.26□□□□□ -0.61
GM2A-201ENST00000357164 UNC13BO14795 1591 aa11.26□□□□□ -0.61
GM2A-201ENST00000357164 KIAA0556O60303 1618 aa11.25□□□□□ -0.61
GM2A-201ENST00000357164 RAPGEF6Q8TEU7 1601 aa11.25□□□□□ -0.61
GM2A-201ENST00000357164 RALBP1Q15311 655 aa11.25□□□□□ -0.61
GM2A-201ENST00000357164 FOXD1Q16676 465 aa11.25□□□□□ -0.61
GM2A-201ENST00000357164 SCAPERQ9BY12 1400 aa11.25□□□□□ -0.61
GM2A-201ENST00000357164 CAMSAP2Q08AD1 1489 aa11.25□□□□□ -0.61
GM2A-201ENST00000357164 NCOA3Q9Y6Q9 1424 aa11.25□□□□□ -0.61
GM2A-201ENST00000357164 EIF3AQ14152 1382 aaKnown RBP11.24□□□□□ -0.61
GM2A-201ENST00000357164 ARHGAP31Q2M1Z3 1444 aa11.24□□□□□ -0.61
GM2A-201ENST00000357164 NUP153P49790 1475 aaKnown RBP11.24□□□□□ -0.61
GM2A-201ENST00000357164 FAM161AQ3B820 660 aa11.24□□□□□ -0.61
GM2A-201ENST00000357164 C20orf194Q5TEA3 1177 aa11.24□□□□□ -0.61
GM2A-201ENST00000357164 SYNJ2O15056 1496 aa11.23□□□□□ -0.61
GM2A-201ENST00000357164 RRP9O43818 475 aaKnown RBP11.23□□□□□ -0.61
GM2A-201ENST00000357164 CRBNQ96SW2 442 aa11.23□□□□□ -0.61
GM2A-201ENST00000357164 RRP7BPQ9NSQ0 103 aa11.23□□□□□ -0.61
GM2A-201ENST00000357164 CDCA7LQ96GN5 454 aa11.23□□□□□ -0.61
GM2A-201ENST00000357164 POGKQ9P215 609 aa11.23□□□□□ -0.61
GM2A-201ENST00000357164 SLC4A3P48751 1232 aa11.22□□□□□ -0.61
GM2A-201ENST00000357164 P3H3Q8IVL6 736 aa11.22□□□□□ -0.61
GM2A-201ENST00000357164 PRDM4Q9UKN5 801 aa11.22□□□□□ -0.61
GM2A-201ENST00000357164 SYNMO15061 1565 aa11.22□□□□□ -0.61
GM2A-201ENST00000357164 DISP1Q96F81 1524 aa11.22□□□□□ -0.61
GM2A-201ENST00000357164 CENPQQ7L2Z9 268 aaPredicted RBP11.22□□□□□ -0.61
GM2A-201ENST00000357164 CEP152O94986 1710 aa11.21□□□□□ -0.61
GM2A-201ENST00000357164 PRAG1Q86YV5 1406 aa11.21□□□□□ -0.61
GM2A-201ENST00000357164 PLEKHH1Q9ULM0 1364 aa11.21□□□□□ -0.61
GM2A-201ENST00000357164 EIF2AK4Q9P2K8 1649 aaKnown RBP11.21□□□□□ -0.62
GM2A-201ENST00000357164 ADRA2BP18089 450 aa11.21□□□□□ -0.62
GM2A-201ENST00000357164 WDR7Q9Y4E6 1490 aa11.21□□□□□ -0.62
GM2A-201ENST00000357164 DDIT3P35638 169 aa11.2□□□□□ -0.62
GM2A-201ENST00000357164 ARHGEF5Q12774 1597 aa11.2□□□□□ -0.62
GM2A-201ENST00000357164 XRCC6P12956 609 aaKnown RBP eCLIP11.2□□□□□ -0.62
GM2A-201ENST00000357164 ERBB4Q15303 1308 aa11.19□□□□□ -0.62
GM2A-201ENST00000357164 DUSP27Q5VZP5 1158 aa11.18□□□□□ -0.62
GM2A-201ENST00000357164 FAM135AQ9P2D6 1515 aa11.18□□□□□ -0.62
GM2A-201ENST00000357164 IQGAP3Q86VI3 1631 aa11.18□□□□□ -0.62
GM2A-201ENST00000357164 GPATCH8Q9UKJ3 1502 aaKnown RBP11.17□□□□□ -0.62
GM2A-201ENST00000357164 ARXQ96QS3 562 aa11.17□□□□□ -0.62
GM2A-201ENST00000357164 MADDQ8WXG6 1647 aa11.17□□□□□ -0.62
GM2A-201ENST00000357164 PLIN1O60240 522 aa11.17□□□□□ -0.62
GM2A-201ENST00000357164 NLRP13Q86W25 1043 aa11.17□□□□□ -0.62
GM2A-201ENST00000357164 MAGI2Q86UL8 1455 aa11.17□□□□□ -0.62
GM2A-201ENST00000357164 SPHKAPQ2M3C7 1700 aa11.17□□□□□ -0.62
GM2A-201ENST00000357164 ZNF692Q9BU19 519 aaPredicted RBP11.16□□□□□ -0.62
GM2A-201ENST00000357164 PLA2R1Q13018 1463 aa11.16□□□□□ -0.62
GM2A-201ENST00000357164 MAST1Q9Y2H9 1570 aa11.16□□□□□ -0.62
GM2A-201ENST00000357164 KIAA1210Q9ULL0 1709 aa11.15□□□□□ -0.62
GM2A-201ENST00000357164 ATP10AO60312 1499 aa11.15□□□□□ -0.62
GM2A-201ENST00000357164 SEC24BO95487 1268 aa11.15□□□□□ -0.62
GM2A-201ENST00000357164 GRIN2AQ12879 1464 aa11.15□□□□□ -0.63
GM2A-201ENST00000357164 CCDC141Q6ZP82 1450 aa11.15□□□□□ -0.63
GM2A-201ENST00000357164 A2MP01023 1474 aa11.13□□□□□ -0.63
GM2A-201ENST00000357164 TMC1Q8TDI8 760 aa11.13□□□□□ -0.63
GM2A-201ENST00000357164 TESK2Q96S53 571 aa11.13□□□□□ -0.63
GM2A-201ENST00000357164 CDC42BPBQ9Y5S2 1711 aa11.13□□□□□ -0.63
GM2A-201ENST00000357164 IQSEC2Q5JU85 1478 aa11.13□□□□□ -0.63
GM2A-201ENST00000357164 ZC3H13Q5T200 1668 aaKnown RBP11.13□□□□□ -0.63
GM2A-201ENST00000357164 PPRC1Q5VV67 1664 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms