RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ZBED9Q6R2W3 1325 aa6.92□□□□□ -1.3
PTPRD-202ENST00000356435 DCAF8L1A6NGE4 600 aa6.92□□□□□ -1.3
PTPRD-202ENST00000356435 AMOTL1Q8IY63 956 aa6.92□□□□□ -1.3
PTPRD-202ENST00000356435 NOL10Q9BSC4 688 aaKnown RBP6.91□□□□□ -1.3
PTPRD-202ENST00000356435 TOMM22Q9NS69 142 aa6.91□□□□□ -1.3
PTPRD-202ENST00000356435 MSH5O43196 834 aa6.91□□□□□ -1.3
PTPRD-202ENST00000356435 KIF3AQ9Y496 699 aa6.91□□□□□ -1.3
PTPRD-202ENST00000356435 PDE4CQ08493 712 aa6.9□□□□□ -1.3
PTPRD-202ENST00000356435 AMPHP49418 695 aa6.9□□□□□ -1.3
PTPRD-202ENST00000356435 CWC22Q9HCG8 908 aaKnown RBP6.9□□□□□ -1.3
PTPRD-202ENST00000356435 GOLGA6L1Q8N7Z2 621 aa6.9□□□□□ -1.31
PTPRD-202ENST00000356435 PKD2Q13563 968 aa6.9□□□□□ -1.31
PTPRD-202ENST00000356435 KANK4Q5T7N3 995 aaPredicted RBP6.89□□□□□ -1.31
PTPRD-202ENST00000356435 CHMP4CQ96CF2 233 aa6.89□□□□□ -1.31
PTPRD-202ENST00000356435 FMN1Q68DA7 1419 aa6.89□□□□□ -1.31
PTPRD-202ENST00000356435 TPM3P06753 285 aa6.89□□□□□ -1.31
PTPRD-202ENST00000356435 RALBP1Q15311 655 aa6.89□□□□□ -1.31
PTPRD-202ENST00000356435 UACAQ9BZF9 1416 aa6.89□□□□□ -1.31
PTPRD-202ENST00000356435 PEG3Q9GZU2 1588 aa6.89□□□□□ -1.31
PTPRD-202ENST00000356435 TRIM6-TRIM34B2RNG4 842 aa6.88□□□□□ -1.31
PTPRD-202ENST00000356435 CNKSR2Q8WXI2 1034 aa6.88□□□□□ -1.31
PTPRD-202ENST00000356435 WASHC2CQ9Y4E1 1318 aa6.88□□□□□ -1.31
PTPRD-202ENST00000356435 TPM2P07951 284 aa6.88□□□□□ -1.31
PTPRD-202ENST00000356435 NUP155O75694 1391 aa6.88□□□□□ -1.31
PTPRD-202ENST00000356435 TCERG1O14776 1098 aaKnown RBP6.88□□□□□ -1.31
PTPRD-202ENST00000356435 C1orf141Q5JVX7 400 aa6.88□□□□□ -1.31
PTPRD-202ENST00000356435 SPRYD3Q8NCJ5 442 aa6.87□□□□□ -1.31
PTPRD-202ENST00000356435 ARAP1Q96P48 1450 aa6.87□□□□□ -1.31
PTPRD-202ENST00000356435 WASHC2AQ641Q2 1341 aa6.87□□□□□ -1.31
PTPRD-202ENST00000356435 EVA1CP58658 441 aa6.87□□□□□ -1.31
PTPRD-202ENST00000356435 TTC5Q8N0Z6 440 aa6.87□□□□□ -1.31
PTPRD-202ENST00000356435 PMFBP1Q8TBY8 1022 aa6.87□□□□□ -1.31
PTPRD-202ENST00000356435 SIN3AQ96ST3 1273 aa6.87□□□□□ -1.31
PTPRD-202ENST00000356435 KIF16BQ96L93 1317 aa6.87□□□□□ -1.31
PTPRD-202ENST00000356435 LRRFIP1Q32MZ4 808 aaKnown RBP6.87□□□□□ -1.31
PTPRD-202ENST00000356435 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.86□□□□□ -1.31
PTPRD-202ENST00000356435 CCDC18Q5T9S5 1454 aa6.86□□□□□ -1.31
PTPRD-202ENST00000356435 C11orf95C9JLR9 678 aaPredicted RBP6.86□□□□□ -1.31
PTPRD-202ENST00000356435 AKAP17AQ02040 695 aaKnown RBP6.86□□□□□ -1.31
PTPRD-202ENST00000356435 SMC4Q9NTJ3 1288 aa6.86□□□□□ -1.31
PTPRD-202ENST00000356435 CREBRFQ8IUR6 639 aa6.86□□□□□ -1.31
PTPRD-202ENST00000356435 KIF3BO15066 747 aa6.86□□□□□ -1.31
PTPRD-202ENST00000356435 PHF14O94880 888 aa6.85□□□□□ -1.31
PTPRD-202ENST00000356435 SLC4A10Q6U841 1118 aa6.85□□□□□ -1.31
PTPRD-202ENST00000356435 LTV1Q96GA3 475 aaPredicted RBP6.85□□□□□ -1.31
PTPRD-202ENST00000356435 HSPA5P11021 654 aaKnown RBP6.84□□□□□ -1.31
PTPRD-202ENST00000356435 SYNE3Q6ZMZ3 975 aa6.84□□□□□ -1.31
PTPRD-202ENST00000356435 MAPKBP1O60336 1514 aa6.84□□□□□ -1.31
PTPRD-202ENST00000356435 TPD52L1Q16890 204 aaPredicted RBP6.84□□□□□ -1.31
PTPRD-202ENST00000356435 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.84□□□□□ -1.31
PTPRD-202ENST00000356435 RAD21O60216 631 aa6.84□□□□□ -1.31
PTPRD-202ENST00000356435 KLHL34Q8N239 644 aa6.84□□□□□ -1.31
PTPRD-202ENST00000356435 TOP2BQ02880 1626 aa6.84□□□□□ -1.31
PTPRD-202ENST00000356435 SYNJ1O43426 1573 aa6.84□□□□□ -1.31
PTPRD-202ENST00000356435 FBXW7Q969H0 707 aa6.84□□□□□ -1.31
PTPRD-202ENST00000356435 TSR1Q2NL82 804 aaKnown RBP6.84□□□□□ -1.31
PTPRD-202ENST00000356435 B4GALNT3Q6L9W6 998 aa6.84□□□□□ -1.31
PTPRD-202ENST00000356435 RSPH6AQ9H0K4 717 aa6.84□□□□□ -1.31
PTPRD-202ENST00000356435 PHLDB1Q86UU1 1377 aa6.84□□□□□ -1.32
PTPRD-202ENST00000356435 CNTLNQ9NXG0 1405 aa6.84□□□□□ -1.32
PTPRD-202ENST00000356435 RSPH4AQ5TD94 716 aa6.83□□□□□ -1.32
PTPRD-202ENST00000356435 NEXNQ0ZGT2 675 aa6.83□□□□□ -1.32
PTPRD-202ENST00000356435 CCDC43Q96MW1 224 aaKnown RBP6.83□□□□□ -1.32
PTPRD-202ENST00000356435 HFM1A2PYH4 1435 aa6.83□□□□□ -1.32
PTPRD-202ENST00000356435 COG3Q96JB2 828 aa6.83□□□□□ -1.32
PTPRD-202ENST00000356435 ST18O60284 1047 aa6.83□□□□□ -1.32
PTPRD-202ENST00000356435 TPM1P09493 284 aa6.83□□□□□ -1.32
PTPRD-202ENST00000356435 FOXD1Q16676 465 aa6.83□□□□□ -1.32
PTPRD-202ENST00000356435 LRRC9Q6ZRR7 1453 aa6.83□□□□□ -1.32
PTPRD-202ENST00000356435 H3BQV1 296 aa6.83□□□□□ -1.32
PTPRD-202ENST00000356435 IFFO2Q5TF58 517 aa6.83□□□□□ -1.32
PTPRD-202ENST00000356435 VPS37DQ86XT2 251 aa6.83□□□□□ -1.32
PTPRD-202ENST00000356435 PDE3BQ13370 1112 aa6.83□□□□□ -1.32
PTPRD-202ENST00000356435 PES1O00541 588 aaKnown RBP6.83□□□□□ -1.32
PTPRD-202ENST00000356435 SF3A1Q15459 793 aaKnown RBP6.83□□□□□ -1.32
PTPRD-202ENST00000356435 CENPJQ9HC77 1338 aaPredicted RBP6.82□□□□□ -1.32
PTPRD-202ENST00000356435 MFAP1P55081 439 aaKnown RBP6.82□□□□□ -1.32
PTPRD-202ENST00000356435 CCDC70Q6NSX1 233 aa6.82□□□□□ -1.32
PTPRD-202ENST00000356435 CCDC47Q96A33 483 aaKnown RBP6.82□□□□□ -1.32
PTPRD-202ENST00000356435 PRKRIP1Q9H875 184 aaPredicted RBP6.82□□□□□ -1.32
PTPRD-202ENST00000356435 ANO8Q9HCE9 1232 aaPredicted RBP6.82□□□□□ -1.32
PTPRD-202ENST00000356435 ATAD2BQ9ULI0 1458 aa6.82□□□□□ -1.32
PTPRD-202ENST00000356435 NUTM2DQ5VT03 806 aaPredicted RBP6.82□□□□□ -1.32
PTPRD-202ENST00000356435 SMG6Q86US8 1419 aaKnown RBP6.82□□□□□ -1.32
PTPRD-202ENST00000356435 PHF23Q9BUL5 403 aaPredicted RBP6.82□□□□□ -1.32
PTPRD-202ENST00000356435 DHX16O60231 1041 aaKnown RBP6.81□□□□□ -1.32
PTPRD-202ENST00000356435 RCAN3Q9UKA8 241 aa6.81□□□□□ -1.32
PTPRD-202ENST00000356435 TIAM1Q13009 1591 aa6.81□□□□□ -1.32
PTPRD-202ENST00000356435 RBM33Q96EV2 1170 aaKnown RBP6.81□□□□□ -1.32
PTPRD-202ENST00000356435 NOL8Q76FK4 1167 aaKnown RBP6.81□□□□□ -1.32
PTPRD-202ENST00000356435 CGNL1Q0VF96 1302 aa6.81□□□□□ -1.32
PTPRD-202ENST00000356435 TRIM29Q14134 588 aa6.8□□□□□ -1.32
PTPRD-202ENST00000356435 ATP6V1DQ9Y5K8 247 aa6.8□□□□□ -1.32
PTPRD-202ENST00000356435 AQRO60306 1485 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTPRD-202ENST00000356435 TEFQ10587 303 aa6.8□□□□□ -1.32
PTPRD-202ENST00000356435 AKNAQ7Z591 1439 aa6.8□□□□□ -1.32
PTPRD-202ENST00000356435 CCDC144AA2RUR9 1427 aa6.8□□□□□ -1.32
PTPRD-202ENST00000356435 AMER1Q5JTC6 1135 aaPredicted RBP6.8□□□□□ -1.32
PTPRD-202ENST00000356435 ANKRD20A12PQ8NF67 263 aa6.8□□□□□ -1.32
PTPRD-202ENST00000356435 SYTL4Q96C24 671 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms