RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 ADGBQ8N7X0 1667 aa19.43■□□□□ 0.7
LSS-201ENST00000356396 FAM135AQ9P2D6 1515 aa19.42■□□□□ 0.7
LSS-201ENST00000356396 UHRF1BP1LA0JNW5 1464 aa19.42■□□□□ 0.7
LSS-201ENST00000356396 RSPH4AQ5TD94 716 aa19.4■□□□□ 0.7
LSS-201ENST00000356396 KIF7Q2M1P5 1343 aa19.4■□□□□ 0.7
LSS-201ENST00000356396 PLA2R1Q13018 1463 aa19.4■□□□□ 0.7
LSS-201ENST00000356396 FAM9BQ8IZU0 186 aa19.39■□□□□ 0.7
LSS-201ENST00000356396 CCDC144AA2RUR9 1427 aa19.39■□□□□ 0.69
LSS-201ENST00000356396 ABCC1P33527 1531 aa19.37■□□□□ 0.69
LSS-201ENST00000356396 UGGT1Q9NYU2 1555 aa19.37■□□□□ 0.69
LSS-201ENST00000356396 USP47Q96K76 1375 aa19.37■□□□□ 0.69
LSS-201ENST00000356396 BCANQ96GW7 911 aa19.36■□□□□ 0.69
LSS-201ENST00000356396 TSPOAP1O95153 1857 aa19.36■□□□□ 0.69
LSS-201ENST00000356396 SHANK2Q9UPX8 1470 aa19.34■□□□□ 0.69
LSS-201ENST00000356396 ROCK2O75116 1388 aaKnown RBP19.34■□□□□ 0.69
LSS-201ENST00000356396 ARHGEF5Q12774 1597 aa19.33■□□□□ 0.69
LSS-201ENST00000356396 SAFB2Q14151 953 aaKnown RBP eCLIP19.32■□□□□ 0.68
LSS-201ENST00000356396 WASHC2CQ9Y4E1 1318 aa19.32■□□□□ 0.68
LSS-201ENST00000356396 SALL2Q9Y467 1007 aaPredicted RBP19.32■□□□□ 0.68
LSS-201ENST00000356396 FBXO31Q5XUX0 539 aaPredicted RBP19.31■□□□□ 0.68
LSS-201ENST00000356396 YEATS2Q9ULM3 1422 aa19.3■□□□□ 0.68
LSS-201ENST00000356396 TMEM132EQ6IEE7 984 aa19.29■□□□□ 0.68
LSS-201ENST00000356396 TRHP20396 242 aaPredicted RBP19.29■□□□□ 0.68
LSS-201ENST00000356396 CFAP70Q5T0N1 1121 aa19.29■□□□□ 0.68
LSS-201ENST00000356396 CCDC7Q96M83 1385 aa19.28■□□□□ 0.68
LSS-201ENST00000356396 RIMBP3CA6NJZ7 1639 aa19.28■□□□□ 0.68
LSS-201ENST00000356396 RIMBP3BA6NNM3 1639 aa19.28■□□□□ 0.68
LSS-201ENST00000356396 RIMBP3Q9UFD9 1639 aa19.28■□□□□ 0.68
LSS-201ENST00000356396 IRX6P78412 446 aaPredicted RBP19.27■□□□□ 0.68
LSS-201ENST00000356396 A2MP01023 1474 aa19.27■□□□□ 0.68
LSS-201ENST00000356396 ZFYVE16Q7Z3T8 1539 aa19.26■□□□□ 0.67
LSS-201ENST00000356396 ATP7AQ04656 1500 aa19.26■□□□□ 0.67
LSS-201ENST00000356396 HNRNPUQ00839 825 aaKnown RBP eCLIP19.26■□□□□ 0.67
LSS-201ENST00000356396 ADGRF5Q8IZF2 1346 aa19.25■□□□□ 0.67
LSS-201ENST00000356396 CC2D1BQ5T0F9 858 aaKnown RBP19.23■□□□□ 0.67
LSS-201ENST00000356396 DUOX2Q9NRD8 1548 aa19.23■□□□□ 0.67
LSS-201ENST00000356396 MRS2Q9HD23 443 aa19.23■□□□□ 0.67
LSS-201ENST00000356396 ABCA9Q8IUA7 1624 aa19.22■□□□□ 0.67
LSS-201ENST00000356396 DHX29Q7Z478 1369 aaKnown RBP19.21■□□□□ 0.67
LSS-201ENST00000356396 ARID4BQ4LE39 1312 aaPredicted RBP19.2■□□□□ 0.66
LSS-201ENST00000356396 STK26Q9P289 416 aa19.19■□□□□ 0.66
LSS-201ENST00000356396 TRAK1Q9UPV9 953 aa19.19■□□□□ 0.66
LSS-201ENST00000356396 BCORL1Q5H9F3 1711 aa19.19■□□□□ 0.66
LSS-201ENST00000356396 PRKRIP1Q9H875 184 aaPredicted RBP19.18■□□□□ 0.66
LSS-201ENST00000356396 SPATA31E1Q6ZUB1 1445 aa19.18■□□□□ 0.66
LSS-201ENST00000356396 KANK1Q14678 1352 aa19.16■□□□□ 0.66
LSS-201ENST00000356396 ATP10AO60312 1499 aa19.16■□□□□ 0.66
LSS-201ENST00000356396 KIDINS220Q9ULH0 1771 aa19.15■□□□□ 0.66
LSS-201ENST00000356396 ERBINQ96RT1 1412 aa19.15■□□□□ 0.66
LSS-201ENST00000356396 DISP3Q9P2K9 1392 aa19.14■□□□□ 0.66
LSS-201ENST00000356396 POGZQ7Z3K3 1410 aa19.14■□□□□ 0.65
LSS-201ENST00000356396 ZNF518AQ6AHZ1 1483 aa19.13■□□□□ 0.65
LSS-201ENST00000356396 CEBPAP49715 358 aaPredicted RBP19.13■□□□□ 0.65
LSS-201ENST00000356396 E9PCH4 1651 aa19.12■□□□□ 0.65
LSS-201ENST00000356396 COL17A1Q9UMD9 1497 aaPredicted RBP19.12■□□□□ 0.65
LSS-201ENST00000356396 PRAG1Q86YV5 1406 aa19.12■□□□□ 0.65
LSS-201ENST00000356396 IDI1Q13907 227 aa19.12■□□□□ 0.65
LSS-201ENST00000356396 PLXNC1O60486 1568 aa19.11■□□□□ 0.65
LSS-201ENST00000356396 TNNT2P45379 298 aaPredicted RBP19.1■□□□□ 0.65
LSS-201ENST00000356396 CNTLNQ9NXG0 1405 aa19.1■□□□□ 0.65
LSS-201ENST00000356396 MAST1Q9Y2H9 1570 aa19.1■□□□□ 0.65
LSS-201ENST00000356396 PANK3Q9H999 370 aa19.09■□□□□ 0.65
LSS-201ENST00000356396 PRDM15P57071 1507 aaPredicted RBP19.09■□□□□ 0.65
LSS-201ENST00000356396 KDM5DQ9BY66 1539 aa19.09■□□□□ 0.65
LSS-201ENST00000356396 STAG3Q9UJ98 1225 aa19.08■□□□□ 0.65
LSS-201ENST00000356396 TESK2Q96S53 571 aa19.08■□□□□ 0.64
LSS-201ENST00000356396 UNC13BO14795 1591 aa19.07■□□□□ 0.64
LSS-201ENST00000356396 RTEL1-TNFRSF6BF6WH68 1400 aa19.07■□□□□ 0.64
LSS-201ENST00000356396 NPATQ14207 1427 aa19.07■□□□□ 0.64
LSS-201ENST00000356396 INO80Q9ULG1 1556 aaPredicted RBP19.06■□□□□ 0.64
LSS-201ENST00000356396 IQGAP3Q86VI3 1631 aa19.06■□□□□ 0.64
LSS-201ENST00000356396 CEP152O94986 1710 aa19.05■□□□□ 0.64
LSS-201ENST00000356396 FRMPD1Q5SYB0 1578 aa19.05■□□□□ 0.64
LSS-201ENST00000356396 CLTCL1P53675 1640 aa19.05■□□□□ 0.64
LSS-201ENST00000356396 ABCA6Q8N139 1617 aa19.04■□□□□ 0.64
LSS-201ENST00000356396 NOS1P29475 1434 aa19.04■□□□□ 0.64
LSS-201ENST00000356396 FKBP8Q14318 412 aa19.04■□□□□ 0.64
LSS-201ENST00000356396 TMC1Q8TDI8 760 aa19.04■□□□□ 0.64
LSS-201ENST00000356396 KDM5CP41229 1560 aa19.02■□□□□ 0.64
LSS-201ENST00000356396 RALGAPBQ86X10 1494 aa19.02■□□□□ 0.64
LSS-201ENST00000356396 MROH1Q8NDA8 1641 aa19.01■□□□□ 0.63
LSS-201ENST00000356396 SUPT16HQ9Y5B9 1047 aaKnown RBP19■□□□□ 0.63
LSS-201ENST00000356396 NUTM2FA1L443 756 aa18.99■□□□□ 0.63
LSS-201ENST00000356396 PPRC1Q5VV67 1664 aaKnown RBP18.98■□□□□ 0.63
LSS-201ENST00000356396 UHRF1BP1Q6BDS2 1440 aa18.98■□□□□ 0.63
LSS-201ENST00000356396 MAGI2Q86UL8 1455 aa18.98■□□□□ 0.63
LSS-201ENST00000356396 CCER2I3L3R5 266 aa18.97■□□□□ 0.63
LSS-201ENST00000356396 HECW2Q9P2P5 1572 aa18.95■□□□□ 0.62
LSS-201ENST00000356396 TMF1P82094 1093 aa18.95■□□□□ 0.62
LSS-201ENST00000356396 ARAP3Q8WWN8 1544 aa18.94■□□□□ 0.62
LSS-201ENST00000356396 SLC12A5Q9H2X9 1139 aa18.94■□□□□ 0.62
LSS-201ENST00000356396 ESF1Q9H501 851 aaKnown RBP18.94■□□□□ 0.62
LSS-201ENST00000356396 DIP2BQ9P265 1576 aa18.94■□□□□ 0.62
LSS-201ENST00000356396 CABP2Q9NPB3 220 aa18.93■□□□□ 0.62
LSS-201ENST00000356396 MINK1Q8N4C8 1332 aaPredicted RBP18.93■□□□□ 0.62
LSS-201ENST00000356396 MLH3Q9UHC1 1453 aa18.92■□□□□ 0.62
LSS-201ENST00000356396 DIP2CQ9Y2E4 1556 aa18.92■□□□□ 0.62
LSS-201ENST00000356396 FBLN1P23142 703 aa18.91■□□□□ 0.62
LSS-201ENST00000356396 RBM33Q96EV2 1170 aaKnown RBP18.91■□□□□ 0.62
LSS-201ENST00000356396 TRPM1Q7Z4N2 1603 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms