RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 MPHOSPH9Q99550 1183 aa9.89□□□□□ -0.83
CCR9-201ENST00000355983 MYH16Q9H6N6 1097 aa9.89□□□□□ -0.83
CCR9-201ENST00000355983 UHRF1BP1Q6BDS2 1440 aa9.88□□□□□ -0.83
CCR9-201ENST00000355983 PDE4CQ08493 712 aa9.88□□□□□ -0.83
CCR9-201ENST00000355983 ROCK1Q13464 1354 aa9.87□□□□□ -0.83
CCR9-201ENST00000355983 KDM6BO15054 1643 aa9.87□□□□□ -0.83
CCR9-201ENST00000355983 LRRIQ1Q96JM4 1722 aa9.87□□□□□ -0.83
CCR9-201ENST00000355983 MCM4P33991 863 aa9.87□□□□□ -0.83
CCR9-201ENST00000355983 PARD3Q8TEW0 1356 aa9.87□□□□□ -0.83
CCR9-201ENST00000355983 USP47Q96K76 1375 aa9.87□□□□□ -0.83
CCR9-201ENST00000355983 NLRP13Q86W25 1043 aa9.87□□□□□ -0.83
CCR9-201ENST00000355983 MTUS2Q5JR59 1369 aa9.86□□□□□ -0.83
CCR9-201ENST00000355983 OFD1O75665 1012 aa9.86□□□□□ -0.83
CCR9-201ENST00000355983 RALGAPBQ86X10 1494 aa9.86□□□□□ -0.83
CCR9-201ENST00000355983 CLASP1Q7Z460 1538 aa9.86□□□□□ -0.83
CCR9-201ENST00000355983 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.86□□□□□ -0.83
CCR9-201ENST00000355983 PABPN1Q86U42 306 aaKnown RBP eCLIP9.86□□□□□ -0.83
CCR9-201ENST00000355983 GRPEL1Q9HAV7 217 aa9.86□□□□□ -0.83
CCR9-201ENST00000355983 MAPK8IP3Q9UPT6 1336 aa9.85□□□□□ -0.83
CCR9-201ENST00000355983 HMGXB3Q12766 1538 aa9.85□□□□□ -0.83
CCR9-201ENST00000355983 PTMSP20962 102 aa9.85□□□□□ -0.83
CCR9-201ENST00000355983 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.85□□□□□ -0.83
CCR9-201ENST00000355983 FHOD3Q2V2M9 1422 aa9.85□□□□□ -0.83
CCR9-201ENST00000355983 GRIN2BQ13224 1484 aa9.85□□□□□ -0.83
CCR9-201ENST00000355983 SAMD9Q5K651 1589 aa9.84□□□□□ -0.83
CCR9-201ENST00000355983 ERBB4Q15303 1308 aa9.84□□□□□ -0.83
CCR9-201ENST00000355983 PANK2Q9BZ23 570 aa9.84□□□□□ -0.83
CCR9-201ENST00000355983 CC2D2AQ9P2K1 1620 aa9.84□□□□□ -0.83
CCR9-201ENST00000355983 CFTRP13569 1480 aa9.84□□□□□ -0.83
CCR9-201ENST00000355983 DDX11L8A8MPP1 907 aa9.84□□□□□ -0.83
CCR9-201ENST00000355983 PDIA4P13667 645 aaKnown RBP9.84□□□□□ -0.83
CCR9-201ENST00000355983 HS1BP3Q53T59 392 aa9.83□□□□□ -0.84
CCR9-201ENST00000355983 KIAA1211Q6ZU35 1233 aa9.83□□□□□ -0.84
CCR9-201ENST00000355983 TRIM44Q96DX7 344 aaPredicted RBP9.83□□□□□ -0.84
CCR9-201ENST00000355983 ARHGEF12Q9NZN5 1544 aa9.83□□□□□ -0.84
CCR9-201ENST00000355983 CUL7Q14999 1698 aa9.83□□□□□ -0.84
CCR9-201ENST00000355983 PPP1R9BQ96SB3 815 aa9.83□□□□□ -0.84
CCR9-201ENST00000355983 A0A0U1RQG5 324 aaPredicted RBP9.81□□□□□ -0.84
CCR9-201ENST00000355983 TRAK2O60296 914 aa9.81□□□□□ -0.84
CCR9-201ENST00000355983 RGS3P49796 1198 aa9.81□□□□□ -0.84
CCR9-201ENST00000355983 CCDC173Q0VFZ6 552 aa9.81□□□□□ -0.84
CCR9-201ENST00000355983 CHMP5Q9NZZ3 219 aa9.81□□□□□ -0.84
CCR9-201ENST00000355983 NINLQ9Y2I6 1382 aa9.81□□□□□ -0.84
CCR9-201ENST00000355983 RIPK4P57078 832 aa9.81□□□□□ -0.84
CCR9-201ENST00000355983 ZSCAN30Q86W11 494 aa9.8□□□□□ -0.84
CCR9-201ENST00000355983 ZNF608Q9ULD9 1512 aaPredicted RBP9.8□□□□□ -0.84
CCR9-201ENST00000355983 TBC1D32Q96NH3 1257 aa9.8□□□□□ -0.84
CCR9-201ENST00000355983 IBTKQ9P2D0 1353 aaPredicted RBP9.8□□□□□ -0.84
CCR9-201ENST00000355983 PLIN1O60240 522 aa9.79□□□□□ -0.84
CCR9-201ENST00000355983 DMTNQ08495 405 aa9.79□□□□□ -0.84
CCR9-201ENST00000355983 SKOR2Q2VWA4 1001 aaPredicted RBP9.79□□□□□ -0.84
CCR9-201ENST00000355983 DYNC1I1O14576 645 aa9.79□□□□□ -0.84
CCR9-201ENST00000355983 SKAP1Q86WV1 359 aa9.79□□□□□ -0.84
CCR9-201ENST00000355983 CDCA7LQ96GN5 454 aa9.78□□□□□ -0.84
CCR9-201ENST00000355983 UPF2Q9HAU5 1272 aaKnown RBP9.78□□□□□ -0.84
CCR9-201ENST00000355983 NCOA3Q9Y6Q9 1424 aa9.78□□□□□ -0.84
CCR9-201ENST00000355983 TBC1D2Q9BYX2 928 aa9.78□□□□□ -0.84
CCR9-201ENST00000355983 DNMT1P26358 1616 aaKnown RBP9.78□□□□□ -0.84
CCR9-201ENST00000355983 EPRSP07814 1512 aaKnown RBP9.78□□□□□ -0.84
CCR9-201ENST00000355983 ZNF500O60304 480 aaPredicted RBP9.77□□□□□ -0.85
CCR9-201ENST00000355983 KIF20AO95235 890 aa9.77□□□□□ -0.85
CCR9-201ENST00000355983 SLKQ9H2G2 1235 aaPredicted RBP9.77□□□□□ -0.85
CCR9-201ENST00000355983 ARHGAP31Q2M1Z3 1444 aa9.77□□□□□ -0.85
CCR9-201ENST00000355983 C20orf194Q5TEA3 1177 aa9.77□□□□□ -0.85
CCR9-201ENST00000355983 GTPBP4Q9BZE4 634 aaKnown RBP9.76□□□□□ -0.85
CCR9-201ENST00000355983 ANKRD30AQ9BXX3 1397 aa9.76□□□□□ -0.85
CCR9-201ENST00000355983 PLXNC1O60486 1568 aa9.76□□□□□ -0.85
CCR9-201ENST00000355983 CIZ1Q9ULV3 898 aaPredicted RBP9.76□□□□□ -0.85
CCR9-201ENST00000355983 ZNF521Q96K83 1311 aa9.76□□□□□ -0.85
CCR9-201ENST00000355983 LAMC1P11047 1609 aa9.75□□□□□ -0.85
CCR9-201ENST00000355983 PZPP20742 1482 aa9.75□□□□□ -0.85
CCR9-201ENST00000355983 CAMSAP2Q08AD1 1489 aa9.75□□□□□ -0.85
CCR9-201ENST00000355983 MCM5P33992 734 aa9.75□□□□□ -0.85
CCR9-201ENST00000355983 CSPP1Q1MSJ5 1256 aa9.75□□□□□ -0.85
CCR9-201ENST00000355983 RRP7BPQ9NSQ0 103 aa9.75□□□□□ -0.85
CCR9-201ENST00000355983 TAF3Q5VWG9 929 aa9.75□□□□□ -0.85
CCR9-201ENST00000355983 DUSP27Q5VZP5 1158 aa9.75□□□□□ -0.85
CCR9-201ENST00000355983 DDIT3P35638 169 aa9.74□□□□□ -0.85
CCR9-201ENST00000355983 CGNL1Q0VF96 1302 aa9.74□□□□□ -0.85
CCR9-201ENST00000355983 KIAA1107Q9UPP5 1409 aa9.74□□□□□ -0.85
CCR9-201ENST00000355983 TRMT2AQ8IZ69 625 aaKnown RBP9.73□□□□□ -0.85
CCR9-201ENST00000355983 CCDC94Q9BW85 323 aaPredicted RBP9.73□□□□□ -0.85
CCR9-201ENST00000355983 MSNP26038 577 aaKnown RBP9.73□□□□□ -0.85
CCR9-201ENST00000355983 TNNT2P45379 298 aaPredicted RBP9.73□□□□□ -0.85
CCR9-201ENST00000355983 ZNF692Q9BU19 519 aaPredicted RBP9.73□□□□□ -0.85
CCR9-201ENST00000355983 MAGI3Q5TCQ9 1506 aa9.73□□□□□ -0.85
CCR9-201ENST00000355983 RTEL1-TNFRSF6BF6WH68 1400 aa9.72□□□□□ -0.85
CCR9-201ENST00000355983 LETM1O95202 739 aaPredicted RBP9.72□□□□□ -0.85
CCR9-201ENST00000355983 PDE3AQ14432 1141 aa9.72□□□□□ -0.85
CCR9-201ENST00000355983 ADGBQ8N7X0 1667 aa9.72□□□□□ -0.85
CCR9-201ENST00000355983 DAPK1P53355 1430 aa9.72□□□□□ -0.85
CCR9-201ENST00000355983 PER1O15534 1290 aaPredicted RBP9.71□□□□□ -0.85
CCR9-201ENST00000355983 SEC24BO95487 1268 aa9.71□□□□□ -0.85
CCR9-201ENST00000355983 ZNF326Q5BKZ1 582 aaKnown RBP9.71□□□□□ -0.85
CCR9-201ENST00000355983 TAF7LQ5H9L4 462 aa9.71□□□□□ -0.85
CCR9-201ENST00000355983 NGEFQ8N5V2 710 aa9.71□□□□□ -0.85
CCR9-201ENST00000355983 ANP32BQ92688 251 aaKnown RBP9.71□□□□□ -0.85
CCR9-201ENST00000355983 NOL7Q9UMY1 257 aaKnown RBP9.71□□□□□ -0.85
CCR9-201ENST00000355983 CEP170Q5SW79 1584 aa9.71□□□□□ -0.85
CCR9-201ENST00000355983 ZSCAN20P17040 1043 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms