RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 KNSTRNQ9Y448 316 aa17.68■□□□□ 0.42
TRIM4-203ENST00000355947 PDE3BQ13370 1112 aa17.68■□□□□ 0.42
TRIM4-203ENST00000355947 MIA2Q96PC5 1412 aa17.67■□□□□ 0.42
TRIM4-203ENST00000355947 BCAR3O75815 825 aa17.66■□□□□ 0.42
TRIM4-203ENST00000355947 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.66■□□□□ 0.42
TRIM4-203ENST00000355947 HECW1Q76N89 1606 aa17.66■□□□□ 0.42
TRIM4-203ENST00000355947 POGKQ9P215 609 aa17.66■□□□□ 0.42
TRIM4-203ENST00000355947 KIAA1107Q9UPP5 1409 aa17.65■□□□□ 0.42
TRIM4-203ENST00000355947 BCL2L13Q9BXK5 485 aa17.65■□□□□ 0.42
TRIM4-203ENST00000355947 CTTNBP2Q8WZ74 1663 aa17.65■□□□□ 0.42
TRIM4-203ENST00000355947 ANKRD30AQ9BXX3 1397 aa17.64■□□□□ 0.42
TRIM4-203ENST00000355947 PLEKHD1A6NEE1 506 aa17.64■□□□□ 0.41
TRIM4-203ENST00000355947 ZNF608Q9ULD9 1512 aaPredicted RBP17.64■□□□□ 0.41
TRIM4-203ENST00000355947 BCORL1Q5H9F3 1711 aa17.64■□□□□ 0.41
TRIM4-203ENST00000355947 LRRIQ1Q96JM4 1722 aa17.64■□□□□ 0.41
TRIM4-203ENST00000355947 CLUAP1Q96AJ1 413 aa17.63■□□□□ 0.41
TRIM4-203ENST00000355947 APAF1O14727 1248 aa17.63■□□□□ 0.41
TRIM4-203ENST00000355947 GOLGA2Q08379 1002 aa17.63■□□□□ 0.41
TRIM4-203ENST00000355947 CENPQQ7L2Z9 268 aaPredicted RBP17.63■□□□□ 0.41
TRIM4-203ENST00000355947 ANKRD50Q9ULJ7 1429 aa17.62■□□□□ 0.41
TRIM4-203ENST00000355947 COG6Q9Y2V7 657 aa17.62■□□□□ 0.41
TRIM4-203ENST00000355947 CUL7Q14999 1698 aa17.62■□□□□ 0.41
TRIM4-203ENST00000355947 CHMP7Q8WUX9 453 aaPredicted RBP17.62■□□□□ 0.41
TRIM4-203ENST00000355947 RRP7AQ9Y3A4 280 aaKnown RBP17.62■□□□□ 0.41
TRIM4-203ENST00000355947 WASHC2CQ9Y4E1 1318 aa17.61■□□□□ 0.41
TRIM4-203ENST00000355947 TMF1P82094 1093 aa17.61■□□□□ 0.41
TRIM4-203ENST00000355947 ABCA5Q8WWZ7 1642 aa17.6■□□□□ 0.41
TRIM4-203ENST00000355947 PANK1Q8TE04 598 aa17.6■□□□□ 0.41
TRIM4-203ENST00000355947 NAP1L5Q96NT1 182 aaPredicted RBP17.6■□□□□ 0.41
TRIM4-203ENST00000355947 LRPPRCP42704 1394 aaKnown RBP17.6■□□□□ 0.41
TRIM4-203ENST00000355947 C8orf34Q49A92 452 aa17.59■□□□□ 0.41
TRIM4-203ENST00000355947 PZPP20742 1482 aa17.58■□□□□ 0.41
TRIM4-203ENST00000355947 TCOF1Q13428 1488 aaKnown RBP17.58■□□□□ 0.41
TRIM4-203ENST00000355947 SEC24BO95487 1268 aa17.57■□□□□ 0.4
TRIM4-203ENST00000355947 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
TRIM4-203ENST00000355947 TARBP1Q13395 1621 aaKnown RBP17.55■□□□□ 0.4
TRIM4-203ENST00000355947 ERCC6Q03468 1493 aa17.55■□□□□ 0.4
TRIM4-203ENST00000355947 ROCK1Q13464 1354 aa17.55■□□□□ 0.4
TRIM4-203ENST00000355947 GCC2Q8IWJ2 1684 aa17.55■□□□□ 0.4
TRIM4-203ENST00000355947 DISP3Q9P2K9 1392 aa17.55■□□□□ 0.4
TRIM4-203ENST00000355947 UPF2Q9HAU5 1272 aaKnown RBP17.54■□□□□ 0.4
TRIM4-203ENST00000355947 SPINK5Q9NQ38 1064 aaPredicted RBP17.54■□□□□ 0.4
TRIM4-203ENST00000355947 BECN1Q14457 450 aa17.53■□□□□ 0.4
TRIM4-203ENST00000355947 IGHDP01880 384 aa17.53■□□□□ 0.4
TRIM4-203ENST00000355947 PER1O15534 1290 aaPredicted RBP17.53■□□□□ 0.4
TRIM4-203ENST00000355947 DUSP27Q5VZP5 1158 aa17.53■□□□□ 0.4
TRIM4-203ENST00000355947 PPP2R1AP30153 589 aa17.52■□□□□ 0.39
TRIM4-203ENST00000355947 PLEKHH1Q9ULM0 1364 aa17.51■□□□□ 0.39
TRIM4-203ENST00000355947 CAMSAP2Q08AD1 1489 aa17.5■□□□□ 0.39
TRIM4-203ENST00000355947 SAMD9Q5K651 1589 aa17.5■□□□□ 0.39
TRIM4-203ENST00000355947 CCDC144AA2RUR9 1427 aa17.5■□□□□ 0.39
TRIM4-203ENST00000355947 CHGAP10645 457 aaKnown RBP17.49■□□□□ 0.39
TRIM4-203ENST00000355947 DMRT2Q9Y5R5 561 aa17.48■□□□□ 0.39
TRIM4-203ENST00000355947 PARD3Q8TEW0 1356 aa17.47■□□□□ 0.39
TRIM4-203ENST00000355947 MFAP1P55081 439 aaKnown RBP17.47■□□□□ 0.39
TRIM4-203ENST00000355947 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
TRIM4-203ENST00000355947 TNNQ9UQP3 1299 aa17.47■□□□□ 0.39
TRIM4-203ENST00000355947 PLB1Q6P1J6 1458 aa17.47■□□□□ 0.39
TRIM4-203ENST00000355947 KDM2BQ8NHM5 1336 aa17.46■□□□□ 0.39
TRIM4-203ENST00000355947 ARHGEF11O15085 1522 aa17.46■□□□□ 0.39
TRIM4-203ENST00000355947 IQGAP2Q13576 1575 aa17.45■□□□□ 0.38
TRIM4-203ENST00000355947 KDM5CP41229 1560 aa17.43■□□□□ 0.38
TRIM4-203ENST00000355947 RALGAPBQ86X10 1494 aa17.43■□□□□ 0.38
TRIM4-203ENST00000355947 PANK2Q9BZ23 570 aa17.43■□□□□ 0.38
TRIM4-203ENST00000355947 CENPJQ9HC77 1338 aaPredicted RBP17.43■□□□□ 0.38
TRIM4-203ENST00000355947 C9orf84Q5VXU9 1444 aa17.42■□□□□ 0.38
TRIM4-203ENST00000355947 TESK2Q96S53 571 aa17.42■□□□□ 0.38
TRIM4-203ENST00000355947 RRAGDQ9NQL2 400 aaPredicted RBP17.42■□□□□ 0.38
TRIM4-203ENST00000355947 KIAA0586Q9BVV6 1533 aa17.42■□□□□ 0.38
TRIM4-203ENST00000355947 NUP153P49790 1475 aaKnown RBP17.42■□□□□ 0.38
TRIM4-203ENST00000355947 SLFN5Q08AF3 891 aa17.41■□□□□ 0.38
TRIM4-203ENST00000355947 HSP90AA1P07900 732 aaKnown RBP17.41■□□□□ 0.38
TRIM4-203ENST00000355947 JPH4Q96JJ6 628 aa17.4■□□□□ 0.38
TRIM4-203ENST00000355947 RSPH6AQ9H0K4 717 aa17.4■□□□□ 0.38
TRIM4-203ENST00000355947 TROQ12816 1431 aaPredicted RBP17.4■□□□□ 0.38
TRIM4-203ENST00000355947 PNNQ9H307 717 aaKnown RBP17.4■□□□□ 0.38
TRIM4-203ENST00000355947 IFT140Q96RY7 1462 aa17.4■□□□□ 0.38
TRIM4-203ENST00000355947 PBRM1Q86U86 1689 aa17.39■□□□□ 0.38
TRIM4-203ENST00000355947 GOLGA6L3A6NEY3 463 aa17.39■□□□□ 0.37
TRIM4-203ENST00000355947 WDR62O43379 1518 aa17.39■□□□□ 0.37
TRIM4-203ENST00000355947 FAM43AQ8N2R8 423 aa17.39■□□□□ 0.37
TRIM4-203ENST00000355947 ADAMTS12P58397 1594 aa17.39■□□□□ 0.37
TRIM4-203ENST00000355947 DNMT1P26358 1616 aaKnown RBP17.39■□□□□ 0.37
TRIM4-203ENST00000355947 VSIG10Q8N0Z9 540 aa17.39■□□□□ 0.37
TRIM4-203ENST00000355947 GPATCH8Q9UKJ3 1502 aaKnown RBP17.38■□□□□ 0.37
TRIM4-203ENST00000355947 ERBINQ96RT1 1412 aa17.38■□□□□ 0.37
TRIM4-203ENST00000355947 UBE2Q2Q8WVN8 375 aa17.38■□□□□ 0.37
TRIM4-203ENST00000355947 FTSJ3Q8IY81 847 aaKnown RBP17.37■□□□□ 0.37
TRIM4-203ENST00000355947 ARID3AQ99856 593 aa17.37■□□□□ 0.37
TRIM4-203ENST00000355947 MBD5Q9P267 1494 aa17.37■□□□□ 0.37
TRIM4-203ENST00000355947 KIF14Q15058 1648 aa17.36■□□□□ 0.37
TRIM4-203ENST00000355947 L1TD1Q5T7N2 865 aaKnown RBP17.36■□□□□ 0.37
TRIM4-203ENST00000355947 PDZRN3Q9UPQ7 1066 aa17.36■□□□□ 0.37
TRIM4-203ENST00000355947 ZBTB7CA1YPR0 619 aa17.34■□□□□ 0.37
TRIM4-203ENST00000355947 TBC1D2Q9BYX2 928 aa17.34■□□□□ 0.37
TRIM4-203ENST00000355947 E9PSI1 815 aa17.34■□□□□ 0.37
TRIM4-203ENST00000355947 SAFB2Q14151 953 aaKnown RBP eCLIP17.34■□□□□ 0.37
TRIM4-203ENST00000355947 PCDHB15Q9Y5E8 787 aa17.32■□□□□ 0.36
TRIM4-203ENST00000355947 RLBP1P12271 317 aa17.31■□□□□ 0.36
TRIM4-203ENST00000355947 MORC1Q86VD1 984 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms