RNA–Protein interactions for RNA: ENST00000355452.5

LAMC3-201, Transcript of laminin subunit gamma 3, humanhuman

TSL 1 (best)

Gene LAMC3, Length 3,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC3-201ENST00000355452 SMARCA4P51532 1647 aa16.12■□□□□ 0.17
LAMC3-201ENST00000355452 CDK11BP21127 795 aaKnown RBP16.11■□□□□ 0.17
LAMC3-201ENST00000355452 HFM1A2PYH4 1435 aa16.11■□□□□ 0.17
LAMC3-201ENST00000355452 BRD4O60885 1362 aaPredicted RBP16.11■□□□□ 0.17
LAMC3-201ENST00000355452 FGD6Q6ZV73 1430 aa16.11■□□□□ 0.17
LAMC3-201ENST00000355452 PTPRKQ15262 1439 aa16.11■□□□□ 0.17
LAMC3-201ENST00000355452 WDR43Q15061 677 aaKnown RBP eCLIP16.1■□□□□ 0.17
LAMC3-201ENST00000355452 AEBP2Q6ZN18 517 aaPredicted RBP16.1■□□□□ 0.17
LAMC3-201ENST00000355452 SMAP1Q8IYB5 467 aaPredicted RBP16.1■□□□□ 0.17
LAMC3-201ENST00000355452 PLCD3Q8N3E9 789 aa16.1■□□□□ 0.17
LAMC3-201ENST00000355452 NAIPQ13075 1403 aa16.1■□□□□ 0.17
LAMC3-201ENST00000355452 OFD1O75665 1012 aa16.1■□□□□ 0.17
LAMC3-201ENST00000355452 ANTXR1Q9H6X2 564 aa16.1■□□□□ 0.17
LAMC3-201ENST00000355452 VGLL3A8MV65 326 aa16.09■□□□□ 0.17
LAMC3-201ENST00000355452 GAS2L3Q86XJ1 694 aa16.08■□□□□ 0.16
LAMC3-201ENST00000355452 ST20-MTHFSA0A0A6YYL1 179 aa16.08■□□□□ 0.16
LAMC3-201ENST00000355452 IGHDP01880 384 aa16.08■□□□□ 0.16
LAMC3-201ENST00000355452 USP19O94966 1318 aa16.07■□□□□ 0.16
LAMC3-201ENST00000355452 HSP90AB1P08238 724 aaKnown RBP16.07■□□□□ 0.16
LAMC3-201ENST00000355452 CBX1P83916 185 aa16.07■□□□□ 0.16
LAMC3-201ENST00000355452 FHOD3Q2V2M9 1422 aa16.07■□□□□ 0.16
LAMC3-201ENST00000355452 CCDC173Q0VFZ6 552 aa16.06■□□□□ 0.16
LAMC3-201ENST00000355452 GBP4Q96PP9 640 aa16.06■□□□□ 0.16
LAMC3-201ENST00000355452 COG6Q9Y2V7 657 aa16.06■□□□□ 0.16
LAMC3-201ENST00000355452 MAPK8IP3Q9UPT6 1336 aa16.05■□□□□ 0.16
LAMC3-201ENST00000355452 PTMAP06454 111 aaKnown RBP16.05■□□□□ 0.16
LAMC3-201ENST00000355452 BCAR3O75815 825 aa16.04■□□□□ 0.16
LAMC3-201ENST00000355452 GOLGA2Q08379 1002 aa16.04■□□□□ 0.16
LAMC3-201ENST00000355452 GOLGA6L22H0YM25 854 aa16.04■□□□□ 0.16
LAMC3-201ENST00000355452 LRPPRCP42704 1394 aaKnown RBP16.03■□□□□ 0.16
LAMC3-201ENST00000355452 DDX49Q9Y6V7 483 aaKnown RBP16.03■□□□□ 0.16
LAMC3-201ENST00000355452 MTERF4Q7Z6M4 381 aaKnown RBP16.02■□□□□ 0.16
LAMC3-201ENST00000355452 IGSF3O75054 1194 aa16.02■□□□□ 0.15
LAMC3-201ENST00000355452 ISY1Q9ULR0 285 aaKnown RBP16.02■□□□□ 0.15
LAMC3-201ENST00000355452 KDM5BQ9UGL1 1544 aa16.01■□□□□ 0.15
LAMC3-201ENST00000355452 PPP4R3BQ5MIZ7 849 aa16.01■□□□□ 0.15
LAMC3-201ENST00000355452 PANK1Q8TE04 598 aa16.01■□□□□ 0.15
LAMC3-201ENST00000355452 C22orf23Q9BZE7 217 aa16.01■□□□□ 0.15
LAMC3-201ENST00000355452 GTF2E1P29083 439 aaPredicted RBP16.01■□□□□ 0.15
LAMC3-201ENST00000355452 TBC1D32Q96NH3 1257 aa16.01■□□□□ 0.15
LAMC3-201ENST00000355452 ADAMTS8Q9UP79 889 aa16.01■□□□□ 0.15
LAMC3-201ENST00000355452 CCDC146Q8IYE0 955 aa16■□□□□ 0.15
LAMC3-201ENST00000355452 PAXIP1Q6ZW49 1069 aaPredicted RBP16■□□□□ 0.15
LAMC3-201ENST00000355452 ROCK2O75116 1388 aaKnown RBP15.99■□□□□ 0.15
LAMC3-201ENST00000355452 CARMIL1Q5VZK9 1371 aa15.99■□□□□ 0.15
LAMC3-201ENST00000355452 STAC3Q96MF2 364 aa15.99■□□□□ 0.15
LAMC3-201ENST00000355452 PTPN23Q9H3S7 1636 aa15.98■□□□□ 0.15
LAMC3-201ENST00000355452 MPNDQ8N594 471 aa15.98■□□□□ 0.15
LAMC3-201ENST00000355452 TNPO1Q92973 898 aaKnown RBP15.98■□□□□ 0.15
LAMC3-201ENST00000355452 SKOR2Q2VWA4 1001 aaPredicted RBP15.97■□□□□ 0.15
LAMC3-201ENST00000355452 TSC1Q92574 1164 aa15.97■□□□□ 0.15
LAMC3-201ENST00000355452 CLUAP1Q96AJ1 413 aa15.96■□□□□ 0.15
LAMC3-201ENST00000355452 DMTNQ08495 405 aa15.96■□□□□ 0.15
LAMC3-201ENST00000355452 CGNQ9P2M7 1197 aaKnown RBP15.96■□□□□ 0.15
LAMC3-201ENST00000355452 DYNC1I1O14576 645 aa15.95■□□□□ 0.14
LAMC3-201ENST00000355452 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.95■□□□□ 0.14
LAMC3-201ENST00000355452 ZNF771Q7L3S4 317 aaPredicted RBP15.95■□□□□ 0.14
LAMC3-201ENST00000355452 DUSP27Q5VZP5 1158 aa15.95■□□□□ 0.14
LAMC3-201ENST00000355452 CCDC94Q9BW85 323 aaPredicted RBP15.95■□□□□ 0.14
LAMC3-201ENST00000355452 SPDYE4A6NLX3 237 aa15.94■□□□□ 0.14
LAMC3-201ENST00000355452 NEUROD2Q15784 382 aa15.94■□□□□ 0.14
LAMC3-201ENST00000355452 PDZRN3Q9UPQ7 1066 aa15.94■□□□□ 0.14
LAMC3-201ENST00000355452 FAM177BA6PVY3 158 aa15.94■□□□□ 0.14
LAMC3-201ENST00000355452 CSPP1Q1MSJ5 1256 aa15.93■□□□□ 0.14
LAMC3-201ENST00000355452 SPATA31E1Q6ZUB1 1445 aa15.93■□□□□ 0.14
LAMC3-201ENST00000355452 CAVIN1Q6NZI2 390 aaKnown RBP15.92■□□□□ 0.14
LAMC3-201ENST00000355452 JARID2Q92833 1246 aaPredicted RBP15.91■□□□□ 0.14
LAMC3-201ENST00000355452 BCL2L13Q9BXK5 485 aa15.91■□□□□ 0.14
LAMC3-201ENST00000355452 SASS6Q6UVJ0 657 aa15.91■□□□□ 0.14
LAMC3-201ENST00000355452 CGNL1Q0VF96 1302 aa15.9■□□□□ 0.14
LAMC3-201ENST00000355452 RNF214Q8ND24 703 aa15.9■□□□□ 0.14
LAMC3-201ENST00000355452 TAF7LQ5H9L4 462 aa15.89■□□□□ 0.13
LAMC3-201ENST00000355452 PANK3Q9H999 370 aa15.89■□□□□ 0.13
LAMC3-201ENST00000355452 MIA2Q96PC5 1412 aa15.89■□□□□ 0.13
LAMC3-201ENST00000355452 TERF1P54274 439 aa15.89■□□□□ 0.13
LAMC3-201ENST00000355452 TPRNQ4KMQ1 711 aa15.89■□□□□ 0.13
LAMC3-201ENST00000355452 TOP2BQ02880 1626 aa15.89■□□□□ 0.13
LAMC3-201ENST00000355452 E9PSI1 815 aa15.89■□□□□ 0.13
LAMC3-201ENST00000355452 PKD2Q13563 968 aa15.89■□□□□ 0.13
LAMC3-201ENST00000355452 PMFBP1Q8TBY8 1022 aa15.89■□□□□ 0.13
LAMC3-201ENST00000355452 CHMP4AQ9BY43 222 aa15.89■□□□□ 0.13
LAMC3-201ENST00000355452 ZBTB22O15209 634 aa15.88■□□□□ 0.13
LAMC3-201ENST00000355452 IGF1RP08069 1367 aa15.88■□□□□ 0.13
LAMC3-201ENST00000355452 ANKRD30BQ9BXX2 1392 aa15.88■□□□□ 0.13
LAMC3-201ENST00000355452 APAF1O14727 1248 aa15.88■□□□□ 0.13
LAMC3-201ENST00000355452 ZSCAN20P17040 1043 aaPredicted RBP15.88■□□□□ 0.13
LAMC3-201ENST00000355452 PCF11O94913 1555 aaKnown RBP15.87■□□□□ 0.13
LAMC3-201ENST00000355452 UTP14CQ5TAP6 766 aaKnown RBP15.87■□□□□ 0.13
LAMC3-201ENST00000355452 MCTP1Q6DN14 999 aa15.87■□□□□ 0.13
LAMC3-201ENST00000355452 PPP1R9BQ96SB3 815 aa15.87■□□□□ 0.13
LAMC3-201ENST00000355452 RWDD1Q9H446 243 aaPredicted RBP15.87■□□□□ 0.13
LAMC3-201ENST00000355452 RGL3Q3MIN7 710 aa15.87■□□□□ 0.13
LAMC3-201ENST00000355452 MYOM3Q5VTT5 1437 aa15.86■□□□□ 0.13
LAMC3-201ENST00000355452 PTMSP20962 102 aa15.86■□□□□ 0.13
LAMC3-201ENST00000355452 SSFA2P28290 1259 aa15.85■□□□□ 0.13
LAMC3-201ENST00000355452 IPO4Q8TEX9 1081 aaKnown RBP15.85■□□□□ 0.13
LAMC3-201ENST00000355452 ZNF777Q9ULD5 760 aaPredicted RBP15.85■□□□□ 0.13
LAMC3-201ENST00000355452 GTPBP4Q9BZE4 634 aaKnown RBP15.84■□□□□ 0.13
LAMC3-201ENST00000355452 NOL7Q9UMY1 257 aaKnown RBP15.84■□□□□ 0.13
LAMC3-201ENST00000355452 PLCB2Q00722 1185 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms