RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 RICTORQ6R327 1708 aa24.79■■□□□ 1.56
VPS13B-201ENST00000355155 MROH1Q8NDA8 1641 aa24.77■■□□□ 1.56
VPS13B-201ENST00000355155 DIEXFQ68CQ4 756 aaKnown RBP24.77■■□□□ 1.56
VPS13B-201ENST00000355155 TET3O43151 1660 aa24.76■■□□□ 1.55
VPS13B-201ENST00000355155 PPRC1Q5VV67 1664 aaKnown RBP24.76■■□□□ 1.55
VPS13B-201ENST00000355155 PKD2Q13563 968 aa24.76■■□□□ 1.55
VPS13B-201ENST00000355155 DHX29Q7Z478 1369 aaKnown RBP24.75■■□□□ 1.55
VPS13B-201ENST00000355155 AFAP1Q8N556 730 aa24.73■■□□□ 1.55
VPS13B-201ENST00000355155 LMTK2Q8IWU2 1503 aa24.73■■□□□ 1.55
VPS13B-201ENST00000355155 UHRF1BP1Q6BDS2 1440 aa24.71■■□□□ 1.55
VPS13B-201ENST00000355155 ZMYM4Q5VZL5 1548 aa24.71■■□□□ 1.55
VPS13B-201ENST00000355155 FRMPD1Q5SYB0 1578 aa24.7■■□□□ 1.54
VPS13B-201ENST00000355155 NEURL4Q96JN8 1562 aa24.7■■□□□ 1.54
VPS13B-201ENST00000355155 FOXD1Q16676 465 aa24.7■■□□□ 1.54
VPS13B-201ENST00000355155 PLA2R1Q13018 1463 aa24.7■■□□□ 1.54
VPS13B-201ENST00000355155 E9PCH4 1651 aa24.69■■□□□ 1.54
VPS13B-201ENST00000355155 CYB5RLQ6IPT4 315 aa24.69■■□□□ 1.54
VPS13B-201ENST00000355155 ABCA6Q8N139 1617 aa24.69■■□□□ 1.54
VPS13B-201ENST00000355155 L3MBTL2Q969R5 705 aa24.67■■□□□ 1.54
VPS13B-201ENST00000355155 A2MP01023 1474 aa24.66■■□□□ 1.54
VPS13B-201ENST00000355155 PTPRTO14522 1441 aa24.65■■□□□ 1.54
VPS13B-201ENST00000355155 TRPM2O94759 1503 aa24.64■■□□□ 1.54
VPS13B-201ENST00000355155 KIF13AQ9H1H9 1805 aa24.64■■□□□ 1.53
VPS13B-201ENST00000355155 DIP2CQ9Y2E4 1556 aa24.63■■□□□ 1.53
VPS13B-201ENST00000355155 SPHKAPQ2M3C7 1700 aa24.63■■□□□ 1.53
VPS13B-201ENST00000355155 REREQ9P2R6 1566 aa24.61■■□□□ 1.53
VPS13B-201ENST00000355155 CEP152O94986 1710 aa24.6■■□□□ 1.53
VPS13B-201ENST00000355155 EFCAB6Q5THR3 1501 aa24.58■■□□□ 1.53
VPS13B-201ENST00000355155 POLR1AO95602 1720 aaPredicted RBP24.58■■□□□ 1.53
VPS13B-201ENST00000355155 RALGAPBQ86X10 1494 aa24.56■■□□□ 1.52
VPS13B-201ENST00000355155 CCDC144AA2RUR9 1427 aa24.55■■□□□ 1.52
VPS13B-201ENST00000355155 KANK1Q14678 1352 aa24.55■■□□□ 1.52
VPS13B-201ENST00000355155 ZC3H13Q5T200 1668 aaKnown RBP24.55■■□□□ 1.52
VPS13B-201ENST00000355155 LAMC1P11047 1609 aa24.54■■□□□ 1.52
VPS13B-201ENST00000355155 SPATA31E1Q6ZUB1 1445 aa24.54■■□□□ 1.52
VPS13B-201ENST00000355155 NBPF8Q3BBV2 869 aa24.51■■□□□ 1.51
VPS13B-201ENST00000355155 TRPM1Q7Z4N2 1603 aa24.49■■□□□ 1.51
VPS13B-201ENST00000355155 CLTCL1P53675 1640 aa24.48■■□□□ 1.51
VPS13B-201ENST00000355155 AGLP35573 1532 aa24.46■■□□□ 1.51
VPS13B-201ENST00000355155 ABCC3O15438 1527 aa24.45■■□□□ 1.5
VPS13B-201ENST00000355155 FAM69CQ0P6D2 419 aa24.44■■□□□ 1.5
VPS13B-201ENST00000355155 CAMSAP1Q5T5Y3 1602 aa24.43■■□□□ 1.5
VPS13B-201ENST00000355155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.43■■□□□ 1.52e-6■■□□□ 14.1
VPS13B-201ENST00000355155 PRAG1Q86YV5 1406 aa24.43■■□□□ 1.5
VPS13B-201ENST00000355155 KIF3BO15066 747 aa24.42■■□□□ 1.5
VPS13B-201ENST00000355155 TSPOAP1O95153 1857 aa24.41■■□□□ 1.5
VPS13B-201ENST00000355155 STAC3Q96MF2 364 aa24.41■■□□□ 1.5
VPS13B-201ENST00000355155 ARHGAP31Q2M1Z3 1444 aa24.41■■□□□ 1.5
VPS13B-201ENST00000355155 IFT172Q9UG01 1749 aa24.4■■□□□ 1.5
VPS13B-201ENST00000355155 EIF4G2P78344 907 aaKnown RBP eCLIP24.4■■□□□ 1.58e-7■■■□□ 16.1
VPS13B-201ENST00000355155 GPRASP1Q5JY77 1395 aa24.39■■□□□ 1.5
VPS13B-201ENST00000355155 KIAA1210Q9ULL0 1709 aa24.38■■□□□ 1.49
VPS13B-201ENST00000355155 KIF1BO60333 1816 aa24.37■■□□□ 1.49
VPS13B-201ENST00000355155 HSPA5P11021 654 aaKnown RBP24.37■■□□□ 1.49
VPS13B-201ENST00000355155 YEATS2Q9ULM3 1422 aa24.37■■□□□ 1.49
VPS13B-201ENST00000355155 PIK3C2BO00750 1634 aa24.36■■□□□ 1.49
VPS13B-201ENST00000355155 MADDQ8WXG6 1647 aa24.36■■□□□ 1.49
VPS13B-201ENST00000355155 RAPGEF3O95398 923 aa24.36■■□□□ 1.49
VPS13B-201ENST00000355155 ARHGEF40Q8TER5 1519 aa24.35■■□□□ 1.49
VPS13B-201ENST00000355155 CNTLNQ9NXG0 1405 aa24.35■■□□□ 1.49
VPS13B-201ENST00000355155 MIER1Q8N108 512 aa24.34■■□□□ 1.49
VPS13B-201ENST00000355155 ADGRB3O60242 1522 aa24.33■■□□□ 1.48
VPS13B-201ENST00000355155 NOS1P29475 1434 aa24.32■■□□□ 1.48
VPS13B-201ENST00000355155 MYOM2P54296 1465 aa24.32■■□□□ 1.48
VPS13B-201ENST00000355155 NPATQ14207 1427 aa24.31■■□□□ 1.48
VPS13B-201ENST00000355155 SIGLEC1Q9BZZ2 1709 aa24.31■■□□□ 1.48
VPS13B-201ENST00000355155 ARID4BQ4LE39 1312 aaPredicted RBP24.29■■□□□ 1.48
VPS13B-201ENST00000355155 MYT1LQ9UL68 1186 aa24.28■■□□□ 1.48
VPS13B-201ENST00000355155 MROH2AA6NES4 1674 aa24.28■■□□□ 1.48
VPS13B-201ENST00000355155 NRXN1Q9ULB1 1477 aa24.28■■□□□ 1.48
VPS13B-201ENST00000355155 PPP6R1Q9UPN7 881 aa24.27■■□□□ 1.48
VPS13B-201ENST00000355155 USP47Q96K76 1375 aa24.26■■□□□ 1.47
VPS13B-201ENST00000355155 COL17A1Q9UMD9 1497 aaPredicted RBP24.25■■□□□ 1.47
VPS13B-201ENST00000355155 DCAF11Q8TEB1 546 aa24.25■■□□□ 1.47
VPS13B-201ENST00000355155 CCDC7Q96M83 1385 aa24.24■■□□□ 1.47
VPS13B-201ENST00000355155 WASHC2AQ641Q2 1341 aa24.24■■□□□ 1.47
VPS13B-201ENST00000355155 SYNMO15061 1565 aa24.24■■□□□ 1.47
VPS13B-201ENST00000355155 IQGAP1P46940 1657 aa24.24■■□□□ 1.47
VPS13B-201ENST00000355155 PPLO60437 1756 aa24.22■■□□□ 1.47
VPS13B-201ENST00000355155 PREX1Q8TCU6 1659 aa24.22■■□□□ 1.47
VPS13B-201ENST00000355155 UGGT1Q9NYU2 1555 aa24.2■■□□□ 1.46
VPS13B-201ENST00000355155 DDX10Q13206 875 aaKnown RBP24.17■■□□□ 1.46
VPS13B-201ENST00000355155 HIRIP3Q9BW71 556 aaPredicted RBP24.16■■□□□ 1.46
VPS13B-201ENST00000355155 ROCK2O75116 1388 aaKnown RBP24.16■■□□□ 1.46
VPS13B-201ENST00000355155 SETBP1Q9Y6X0 1596 aa24.15■■□□□ 1.46
VPS13B-201ENST00000355155 WASHC2CQ9Y4E1 1318 aa24.14■■□□□ 1.45
VPS13B-201ENST00000355155 C11orf95C9JLR9 678 aaPredicted RBP24.13■■□□□ 1.45
VPS13B-201ENST00000355155 CARD11Q9BXL7 1154 aa24.12■■□□□ 1.45
VPS13B-201ENST00000355155 KIF7Q2M1P5 1343 aa24.12■■□□□ 1.45
VPS13B-201ENST00000355155 RPGRIP1LQ68CZ1 1315 aa24.11■■□□□ 1.45
VPS13B-201ENST00000355155 SPATA31D1Q6ZQQ2 1576 aa24.11■■□□□ 1.45
VPS13B-201ENST00000355155 GGT6Q6P531 493 aa24.11■■□□□ 1.45
VPS13B-201ENST00000355155 CCER2I3L3R5 266 aa24.1■■□□□ 1.45
VPS13B-201ENST00000355155 KDM2AQ9Y2K7 1162 aa24.1■■□□□ 1.45
VPS13B-201ENST00000355155 MYO3AQ8NEV4 1616 aa24.09■■□□□ 1.45
VPS13B-201ENST00000355155 CLTCQ00610 1675 aaKnown RBP24.09■■□□□ 1.45
VPS13B-201ENST00000355155 RGL3Q3MIN7 710 aa24.08■■□□□ 1.45
VPS13B-201ENST00000355155 TMEM131LA2VDJ0 1609 aa24.08■■□□□ 1.45
VPS13B-201ENST00000355155 ZFYVE9O95405 1425 aa24.08■■□□□ 1.44
VPS13B-201ENST00000355155 ERVK-7P63135 1459 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms