RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 DHX16O60231 1041 aaKnown RBP12.48□□□□□ -0.41
COL11A1-201ENST00000353414 ROCK2O75116 1388 aaKnown RBP12.48□□□□□ -0.41
COL11A1-201ENST00000353414 EIF2S2P20042 333 aaKnown RBP12.48□□□□□ -0.41
COL11A1-201ENST00000353414 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
COL11A1-201ENST00000353414 SF3A1Q15459 793 aaKnown RBP12.47□□□□□ -0.41
COL11A1-201ENST00000353414 PKD2Q13563 968 aa12.47□□□□□ -0.41
COL11A1-201ENST00000353414 CEP162Q5TB80 1403 aa12.47□□□□□ -0.41
COL11A1-201ENST00000353414 BCL2L13Q9BXK5 485 aa12.46□□□□□ -0.41
COL11A1-201ENST00000353414 IPO8O15397 1037 aaKnown RBP12.46□□□□□ -0.41
COL11A1-201ENST00000353414 EID1Q9Y6B2 187 aa12.46□□□□□ -0.41
COL11A1-201ENST00000353414 HSPA5P11021 654 aaKnown RBP12.46□□□□□ -0.41
COL11A1-201ENST00000353414 MCTP1Q6DN14 999 aa12.46□□□□□ -0.42
COL11A1-201ENST00000353414 TCERG1O14776 1098 aaKnown RBP12.45□□□□□ -0.42
COL11A1-201ENST00000353414 PCMTD1Q96MG8 357 aaPredicted RBP12.45□□□□□ -0.42
COL11A1-201ENST00000353414 KIF27Q86VH2 1401 aa12.45□□□□□ -0.42
COL11A1-201ENST00000353414 H3BQV1 296 aa12.45□□□□□ -0.42
COL11A1-201ENST00000353414 IFFO2Q5TF58 517 aa12.45□□□□□ -0.42
COL11A1-201ENST00000353414 GOLGA3Q08378 1498 aa12.45□□□□□ -0.42
COL11A1-201ENST00000353414 TRAK1Q9UPV9 953 aa12.45□□□□□ -0.42
COL11A1-201ENST00000353414 APPP05067 770 aa12.44□□□□□ -0.42
COL11A1-201ENST00000353414 PDS5BQ9NTI5 1447 aa12.44□□□□□ -0.42
COL11A1-201ENST00000353414 GOLGA6L1Q8N7Z2 621 aa12.44□□□□□ -0.42
COL11A1-201ENST00000353414 FAM177BA6PVY3 158 aa12.44□□□□□ -0.42
COL11A1-201ENST00000353414 VPS37DQ86XT2 251 aa12.44□□□□□ -0.42
COL11A1-201ENST00000353414 HNRNPMP52272 730 aaKnown RBP eCLIP12.43□□□□□ -0.42
COL11A1-201ENST00000353414 KIF3BO15066 747 aa12.43□□□□□ -0.42
COL11A1-201ENST00000353414 DCAF8L1A6NGE4 600 aa12.42□□□□□ -0.42
COL11A1-201ENST00000353414 GBP4Q96PP9 640 aa12.42□□□□□ -0.42
COL11A1-201ENST00000353414 KTN1Q86UP2 1357 aaKnown RBP12.41□□□□□ -0.42
COL11A1-201ENST00000353414 C1orf141Q5JVX7 400 aa12.41□□□□□ -0.42
COL11A1-201ENST00000353414 AKAP17AQ02040 695 aaKnown RBP12.41□□□□□ -0.42
COL11A1-201ENST00000353414 NUTM2GQ5VZR2 741 aa12.41□□□□□ -0.42
COL11A1-201ENST00000353414 PLIN1O60240 522 aa12.41□□□□□ -0.42
COL11A1-201ENST00000353414 IBSPP21815 317 aaPredicted RBP12.41□□□□□ -0.42
COL11A1-201ENST00000353414 MYO15BQ96JP2 1530 aa12.4□□□□□ -0.42
COL11A1-201ENST00000353414 HTATSF1O43719 755 aaKnown RBP12.4□□□□□ -0.42
COL11A1-201ENST00000353414 TPM3P06753 285 aa12.4□□□□□ -0.42
COL11A1-201ENST00000353414 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.4□□□□□ -0.42
COL11A1-201ENST00000353414 RCAN3Q9UKA8 241 aa12.4□□□□□ -0.42
COL11A1-201ENST00000353414 KIF16BQ96L93 1317 aa12.4□□□□□ -0.43
COL11A1-201ENST00000353414 USP35Q9P2H5 1018 aa12.39□□□□□ -0.43
COL11A1-201ENST00000353414 NOL10Q9BSC4 688 aaKnown RBP12.39□□□□□ -0.43
COL11A1-201ENST00000353414 FAM184AQ8NB25 1140 aa12.39□□□□□ -0.43
COL11A1-201ENST00000353414 RWDD1Q9H446 243 aaPredicted RBP12.39□□□□□ -0.43
COL11A1-201ENST00000353414 ZNF592Q92610 1267 aa12.39□□□□□ -0.43
COL11A1-201ENST00000353414 WASHC2CQ9Y4E1 1318 aa12.38□□□□□ -0.43
COL11A1-201ENST00000353414 WRNQ14191 1432 aaPredicted RBP eCLIP12.38□□□□□ -0.43
COL11A1-201ENST00000353414 FAM69CQ0P6D2 419 aa12.38□□□□□ -0.43
COL11A1-201ENST00000353414 PTMSP20962 102 aa12.38□□□□□ -0.43
COL11A1-201ENST00000353414 STK11IPQ8N1F8 1099 aa12.37□□□□□ -0.43
COL11A1-201ENST00000353414 ANKRD45Q5TZF3 282 aa12.36□□□□□ -0.43
COL11A1-201ENST00000353414 CCDC27Q2M243 656 aa12.36□□□□□ -0.43
COL11A1-201ENST00000353414 CALD1Q05682 793 aaKnown RBP12.36□□□□□ -0.43
COL11A1-201ENST00000353414 SYAP1Q96A49 352 aaPredicted RBP12.35□□□□□ -0.43
COL11A1-201ENST00000353414 SKIDA1Q1XH10 827 aa12.35□□□□□ -0.43
COL11A1-201ENST00000353414 PIP4K2BP78356 416 aa12.35□□□□□ -0.43
COL11A1-201ENST00000353414 CALRP27797 417 aaKnown RBP12.35□□□□□ -0.43
COL11A1-201ENST00000353414 TSR1Q2NL82 804 aaKnown RBP12.34□□□□□ -0.43
COL11A1-201ENST00000353414 CCDC43Q96MW1 224 aaKnown RBP12.34□□□□□ -0.43
COL11A1-201ENST00000353414 AIMP1Q12904 312 aaKnown RBP12.34□□□□□ -0.43
COL11A1-201ENST00000353414 AMOTL1Q8IY63 956 aa12.34□□□□□ -0.43
COL11A1-201ENST00000353414 TTC5Q8N0Z6 440 aa12.34□□□□□ -0.43
COL11A1-201ENST00000353414 CCDC34Q96HJ3 373 aa12.33□□□□□ -0.43
COL11A1-201ENST00000353414 NFXL1Q6ZNB6 911 aa12.33□□□□□ -0.44
COL11A1-201ENST00000353414 HMMRO75330 724 aa12.33□□□□□ -0.44
COL11A1-201ENST00000353414 IKQ13123 557 aaPredicted RBP12.33□□□□□ -0.44
COL11A1-201ENST00000353414 PSME1Q06323 249 aa12.33□□□□□ -0.44
COL11A1-201ENST00000353414 ZFYVE27Q5T4F4 411 aa12.33□□□□□ -0.44
COL11A1-201ENST00000353414 TMEM132AQ24JP5 1023 aa12.32□□□□□ -0.44
COL11A1-201ENST00000353414 C9orf78Q9NZ63 289 aaPredicted RBP12.32□□□□□ -0.44
COL11A1-201ENST00000353414 MINK1Q8N4C8 1332 aaPredicted RBP12.32□□□□□ -0.44
COL11A1-201ENST00000353414 SYNE3Q6ZMZ3 975 aa12.32□□□□□ -0.44
COL11A1-201ENST00000353414 NUP155O75694 1391 aa12.32□□□□□ -0.44
COL11A1-201ENST00000353414 CHMP4CQ96CF2 233 aa12.32□□□□□ -0.44
COL11A1-201ENST00000353414 NAP1L1P55209 391 aaKnown RBP12.32□□□□□ -0.44
COL11A1-201ENST00000353414 TERF2IPQ9NYB0 399 aa12.32□□□□□ -0.44
COL11A1-201ENST00000353414 RBM19Q9Y4C8 960 aaKnown RBP12.32□□□□□ -0.44
COL11A1-201ENST00000353414 RBM33Q96EV2 1170 aaKnown RBP12.32□□□□□ -0.44
COL11A1-201ENST00000353414 PMFBP1Q8TBY8 1022 aa12.31□□□□□ -0.44
COL11A1-201ENST00000353414 ANO2Q9NQ90 1003 aa12.31□□□□□ -0.44
COL11A1-201ENST00000353414 GOLGA6L3A6NEY3 463 aa12.31□□□□□ -0.44
COL11A1-201ENST00000353414 TPM2P07951 284 aa12.31□□□□□ -0.44
COL11A1-201ENST00000353414 CUX2O14529 1486 aa12.31□□□□□ -0.44
COL11A1-201ENST00000353414 PAF1Q8N7H5 531 aa12.3□□□□□ -0.44
COL11A1-201ENST00000353414 NUTM2BA6NNL0 878 aaPredicted RBP12.3□□□□□ -0.44
COL11A1-201ENST00000353414 NUTM2EB1AL46 878 aaPredicted RBP12.3□□□□□ -0.44
COL11A1-201ENST00000353414 NUTM2AQ8IVF1 878 aaPredicted RBP12.3□□□□□ -0.44
COL11A1-201ENST00000353414 SETQ01105 290 aaPredicted RBP12.3□□□□□ -0.44
COL11A1-201ENST00000353414 TEFQ10587 303 aa12.3□□□□□ -0.44
COL11A1-201ENST00000353414 VSIG10Q8N0Z9 540 aa12.3□□□□□ -0.44
COL11A1-201ENST00000353414 TDRD9Q8NDG6 1382 aaKnown RBP12.3□□□□□ -0.44
COL11A1-201ENST00000353414 CARMIL2Q6F5E8 1435 aa12.29□□□□□ -0.44
COL11A1-201ENST00000353414 GOLGA6L19H0YKK7 550 aa12.29□□□□□ -0.44
COL11A1-201ENST00000353414 DHX37Q8IY37 1157 aaKnown RBP12.29□□□□□ -0.44
COL11A1-201ENST00000353414 CCAR1Q8IX12 1150 aaKnown RBP12.29□□□□□ -0.44
COL11A1-201ENST00000353414 TTLL5Q6EMB2 1281 aa12.28□□□□□ -0.44
COL11A1-201ENST00000353414 CFAP44Q96MT7 982 aa12.28□□□□□ -0.44
COL11A1-201ENST00000353414 CSPP1Q1MSJ5 1256 aa12.28□□□□□ -0.44
COL11A1-201ENST00000353414 CENPJQ9HC77 1338 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-201ENST00000353414 TRIM29Q14134 588 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms