RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 BCL11AQ9H165 835 aa13.96□□□□□ -0.17
SMPD4-201ENST00000351288 PPP4R2Q9NY27 417 aa13.96□□□□□ -0.17
SMPD4-201ENST00000351288 NUP160Q12769 1436 aa13.96□□□□□ -0.17
SMPD4-201ENST00000351288 RSPH4AQ5TD94 716 aa13.95□□□□□ -0.18
SMPD4-201ENST00000351288 ARID4BQ4LE39 1312 aaPredicted RBP13.95□□□□□ -0.18
SMPD4-201ENST00000351288 RAPGEF3O95398 923 aa13.94□□□□□ -0.18
SMPD4-201ENST00000351288 NEUROD2Q15784 382 aa13.94□□□□□ -0.18
SMPD4-201ENST00000351288 CDC42BPAQ5VT25 1732 aa13.93□□□□□ -0.18
SMPD4-201ENST00000351288 PLEKHG5O94827 1062 aa13.93□□□□□ -0.18
SMPD4-201ENST00000351288 KNSTRNQ9Y448 316 aa13.93□□□□□ -0.18
SMPD4-201ENST00000351288 PNISRQ8TF01 805 aaKnown RBP13.93□□□□□ -0.18
SMPD4-201ENST00000351288 ITSN2Q9NZM3 1697 aa13.92□□□□□ -0.18
SMPD4-201ENST00000351288 ABCC10Q5T3U5 1492 aa13.92□□□□□ -0.18
SMPD4-201ENST00000351288 CCDC136Q96JN2 1154 aa13.91□□□□□ -0.18
SMPD4-201ENST00000351288 TRAK1Q9UPV9 953 aa13.91□□□□□ -0.18
SMPD4-201ENST00000351288 WASHC2CQ9Y4E1 1318 aa13.91□□□□□ -0.18
SMPD4-201ENST00000351288 SCAPERQ9BY12 1400 aa13.91□□□□□ -0.18
SMPD4-201ENST00000351288 TMF1P82094 1093 aa13.91□□□□□ -0.18
SMPD4-201ENST00000351288 ERCC6L2Q5T890 1561 aa13.9□□□□□ -0.18
SMPD4-201ENST00000351288 WDR43Q15061 677 aaKnown RBP eCLIP13.9□□□□□ -0.18
SMPD4-201ENST00000351288 CDCA7LQ96GN5 454 aa13.89□□□□□ -0.19
SMPD4-201ENST00000351288 KANK1Q14678 1352 aa13.89□□□□□ -0.19
SMPD4-201ENST00000351288 ADGRL2O95490 1459 aa13.89□□□□□ -0.19
SMPD4-201ENST00000351288 PANK3Q9H999 370 aa13.88□□□□□ -0.19
SMPD4-201ENST00000351288 NUDCQ9Y266 331 aa13.88□□□□□ -0.19
SMPD4-201ENST00000351288 PLEKHH2Q8IVE3 1493 aa13.88□□□□□ -0.19
SMPD4-201ENST00000351288 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
SMPD4-201ENST00000351288 ABCA8O94911 1581 aa13.88□□□□□ -0.19
SMPD4-201ENST00000351288 SYCP2Q9BX26 1530 aa13.88□□□□□ -0.19
SMPD4-201ENST00000351288 MBD5Q9P267 1494 aa13.88□□□□□ -0.19
SMPD4-201ENST00000351288 PLIN1O60240 522 aa13.87□□□□□ -0.19
SMPD4-201ENST00000351288 SKAP1Q86WV1 359 aa13.86□□□□□ -0.19
SMPD4-201ENST00000351288 PPM1GO15355 546 aaPredicted RBP13.86□□□□□ -0.19
SMPD4-201ENST00000351288 TMEM132EQ6IEE7 984 aa13.86□□□□□ -0.19
SMPD4-201ENST00000351288 FAM69CQ0P6D2 419 aa13.85□□□□□ -0.19
SMPD4-201ENST00000351288 CFAP70Q5T0N1 1121 aa13.85□□□□□ -0.19
SMPD4-201ENST00000351288 KDM5CP41229 1560 aa13.85□□□□□ -0.19
SMPD4-201ENST00000351288 CCDC141Q6ZP82 1450 aa13.84□□□□□ -0.19
SMPD4-201ENST00000351288 CROCC2H7BZ55 1655 aa13.84□□□□□ -0.19
SMPD4-201ENST00000351288 SAMD9LQ8IVG5 1584 aa13.84□□□□□ -0.19
SMPD4-201ENST00000351288 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
SMPD4-201ENST00000351288 DISP3Q9P2K9 1392 aa13.83□□□□□ -0.19
SMPD4-201ENST00000351288 FAM135AQ9P2D6 1515 aa13.83□□□□□ -0.19
SMPD4-201ENST00000351288 NPM2Q86SE8 214 aaKnown RBP13.83□□□□□ -0.2
SMPD4-201ENST00000351288 MYBBP1AQ9BQG0 1328 aaKnown RBP13.82□□□□□ -0.2
SMPD4-201ENST00000351288 EXOC6Q8TAG9 804 aa13.82□□□□□ -0.2
SMPD4-201ENST00000351288 RALGAPBQ86X10 1494 aa13.82□□□□□ -0.2
SMPD4-201ENST00000351288 CANXP27824 592 aaKnown RBP13.82□□□□□ -0.2
SMPD4-201ENST00000351288 TTC37Q6PGP7 1564 aa13.81□□□□□ -0.2
SMPD4-201ENST00000351288 ADCY10Q96PN6 1610 aa13.81□□□□□ -0.2
SMPD4-201ENST00000351288 POGKQ9P215 609 aa13.81□□□□□ -0.2
SMPD4-201ENST00000351288 CDC42BPBQ9Y5S2 1711 aa13.81□□□□□ -0.2
SMPD4-201ENST00000351288 CCDC146Q8IYE0 955 aa13.8□□□□□ -0.2
SMPD4-201ENST00000351288 PLA2R1Q13018 1463 aa13.8□□□□□ -0.2
SMPD4-201ENST00000351288 SRPK2P78362 688 aaKnown RBP13.79□□□□□ -0.2
SMPD4-201ENST00000351288 NBR1Q14596 966 aa13.79□□□□□ -0.2
SMPD4-201ENST00000351288 NUTM2FA1L443 756 aa13.79□□□□□ -0.2
SMPD4-201ENST00000351288 KTN1Q86UP2 1357 aaKnown RBP13.79□□□□□ -0.2
SMPD4-201ENST00000351288 TESK2Q96S53 571 aa13.78□□□□□ -0.2
SMPD4-201ENST00000351288 SOX12O15370 315 aa13.78□□□□□ -0.2
SMPD4-201ENST00000351288 CHD1O14646 1710 aa13.78□□□□□ -0.2
SMPD4-201ENST00000351288 ARHGEF12Q9NZN5 1544 aa13.78□□□□□ -0.2
SMPD4-201ENST00000351288 NLRP13Q86W25 1043 aa13.77□□□□□ -0.2
SMPD4-201ENST00000351288 PRAG1Q86YV5 1406 aa13.77□□□□□ -0.2
SMPD4-201ENST00000351288 TRAPPC8Q9Y2L5 1435 aa13.77□□□□□ -0.2
SMPD4-201ENST00000351288 UHRF1BP1Q6BDS2 1440 aa13.77□□□□□ -0.21
SMPD4-201ENST00000351288 SMG6Q86US8 1419 aaKnown RBP13.77□□□□□ -0.21
SMPD4-201ENST00000351288 SLC24A1O60721 1099 aa13.77□□□□□ -0.21
SMPD4-201ENST00000351288 RALBP1Q15311 655 aa13.77□□□□□ -0.21
SMPD4-201ENST00000351288 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.77□□□□□ -0.211e-6■■■■□ 23.9
SMPD4-201ENST00000351288 PER1O15534 1290 aaPredicted RBP13.77□□□□□ -0.21
SMPD4-201ENST00000351288 A2MP01023 1474 aa13.77□□□□□ -0.21
SMPD4-201ENST00000351288 RCAN3Q9UKA8 241 aa13.76□□□□□ -0.21
SMPD4-201ENST00000351288 SHANK2Q9UPX8 1470 aa13.76□□□□□ -0.21
SMPD4-201ENST00000351288 PAK3O75914 559 aaPredicted RBP13.75□□□□□ -0.21
SMPD4-201ENST00000351288 CDCA8Q53HL2 280 aa13.75□□□□□ -0.21
SMPD4-201ENST00000351288 ADAMTS8Q9UP79 889 aa13.74□□□□□ -0.21
SMPD4-201ENST00000351288 RRP1P56182 461 aaKnown RBP13.73□□□□□ -0.21
SMPD4-201ENST00000351288 U2SURPO15042 1029 aaKnown RBP13.72□□□□□ -0.21
SMPD4-201ENST00000351288 POLR1AO95602 1720 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-201ENST00000351288 KDM5DQ9BY66 1539 aa13.72□□□□□ -0.21
SMPD4-201ENST00000351288 BRD4O60885 1362 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-201ENST00000351288 ERICH6BQ5W0A0 696 aa13.71□□□□□ -0.21
SMPD4-201ENST00000351288 MORC1Q86VD1 984 aa13.71□□□□□ -0.21
SMPD4-201ENST00000351288 RRP7AQ9Y3A4 280 aaKnown RBP13.71□□□□□ -0.21
SMPD4-201ENST00000351288 C20orf194Q5TEA3 1177 aa13.71□□□□□ -0.22
SMPD4-201ENST00000351288 PREX2Q70Z35 1606 aa13.71□□□□□ -0.22
SMPD4-201ENST00000351288 MINK1Q8N4C8 1332 aaPredicted RBP13.7□□□□□ -0.22
SMPD4-201ENST00000351288 ERBINQ96RT1 1412 aa13.7□□□□□ -0.22
SMPD4-201ENST00000351288 FANCIQ9NVI1 1328 aa13.69□□□□□ -0.22
SMPD4-201ENST00000351288 ARHGEF5Q12774 1597 aa13.69□□□□□ -0.22
SMPD4-201ENST00000351288 LRPPRCP42704 1394 aaKnown RBP13.68□□□□□ -0.22
SMPD4-201ENST00000351288 ADGRF5Q8IZF2 1346 aa13.68□□□□□ -0.22
SMPD4-201ENST00000351288 FRAT1Q92837 279 aaPredicted RBP13.67□□□□□ -0.22
SMPD4-201ENST00000351288 FANCAO15360 1455 aa13.67□□□□□ -0.22
SMPD4-201ENST00000351288 CRBNQ96SW2 442 aa13.67□□□□□ -0.22
SMPD4-201ENST00000351288 PARD3Q8TEW0 1356 aa13.67□□□□□ -0.22
SMPD4-201ENST00000351288 ADGRL1O94910 1474 aa13.67□□□□□ -0.22
SMPD4-201ENST00000351288 CFAP65Q6ZU64 1925 aaKnown RBP13.67□□□□□ -0.22
SMPD4-201ENST00000351288 ZBTB7CA1YPR0 619 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms