RNA–Protein interactions for RNA: ENST00000350721.8

ATR-201, Transcript of ATR serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATR, Length 8,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-201ENST00000350721 TDRD9Q8NDG6 1382 aaKnown RBP9.59□□□□□ -0.87
ATR-201ENST00000350721 PCF11O94913 1555 aaKnown RBP9.59□□□□□ -0.87
ATR-201ENST00000350721 CFAP43Q8NDM7 1665 aa9.59□□□□□ -0.87
ATR-201ENST00000350721 FAM43AQ8N2R8 423 aa9.58□□□□□ -0.88
ATR-201ENST00000350721 PTMAP06454 111 aaKnown RBP9.58□□□□□ -0.88
ATR-201ENST00000350721 PTPN23Q9H3S7 1636 aa9.58□□□□□ -0.88
ATR-201ENST00000350721 RPRD2Q5VT52 1461 aaKnown RBP9.57□□□□□ -0.88
ATR-201ENST00000350721 CHAF1AQ13111 956 aaPredicted RBP9.57□□□□□ -0.88
ATR-201ENST00000350721 SLKQ9H2G2 1235 aaPredicted RBP9.57□□□□□ -0.88
ATR-201ENST00000350721 SYAP1Q96A49 352 aaPredicted RBP9.57□□□□□ -0.88
ATR-201ENST00000350721 KIAA1107Q9UPP5 1409 aa9.57□□□□□ -0.88
ATR-201ENST00000350721 MTERF4Q7Z6M4 381 aaKnown RBP9.56□□□□□ -0.88
ATR-201ENST00000350721 MAP7D2Q96T17 732 aa9.56□□□□□ -0.88
ATR-201ENST00000350721 ANKRD50Q9ULJ7 1429 aa9.56□□□□□ -0.88
ATR-201ENST00000350721 C11orf95C9JLR9 678 aaPredicted RBP9.56□□□□□ -0.88
ATR-201ENST00000350721 PAK3O75914 559 aaPredicted RBP9.56□□□□□ -0.88
ATR-201ENST00000350721 PDE3AQ14432 1141 aa9.55□□□□□ -0.88
ATR-201ENST00000350721 CHMP5Q9NZZ3 219 aa9.55□□□□□ -0.88
ATR-201ENST00000350721 DNTTIP2Q5QJE6 756 aaKnown RBP9.55□□□□□ -0.88
ATR-201ENST00000350721 DNMBPQ6XZF7 1577 aa9.55□□□□□ -0.88
ATR-201ENST00000350721 ABCA10Q8WWZ4 1543 aa9.55□□□□□ -0.88
ATR-201ENST00000350721 BICRAQ9NZM4 1560 aa9.54□□□□□ -0.88
ATR-201ENST00000350721 CRBNQ96SW2 442 aa9.54□□□□□ -0.88
ATR-201ENST00000350721 MRE11P49959 708 aa9.54□□□□□ -0.88
ATR-201ENST00000350721 ANKRD30BQ9BXX2 1392 aa9.54□□□□□ -0.88
ATR-201ENST00000350721 MORC1Q86VD1 984 aa9.53□□□□□ -0.88
ATR-201ENST00000350721 CHGAP10645 457 aaKnown RBP9.53□□□□□ -0.88
ATR-201ENST00000350721 KIAA2012Q0VF49 1180 aa9.53□□□□□ -0.88
ATR-201ENST00000350721 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.52□□□□□ -0.89
ATR-201ENST00000350721 MCCP23508 829 aa9.52□□□□□ -0.89
ATR-201ENST00000350721 NRDCO43847 1150 aa9.52□□□□□ -0.89
ATR-201ENST00000350721 PHF14O94880 888 aa9.52□□□□□ -0.89
ATR-201ENST00000350721 PANK3Q9H999 370 aa9.52□□□□□ -0.89
ATR-201ENST00000350721 SCAPERQ9BY12 1400 aa9.51□□□□□ -0.89
ATR-201ENST00000350721 NEUROD2Q15784 382 aa9.5□□□□□ -0.89
ATR-201ENST00000350721 CHMP4AQ9BY43 222 aa9.5□□□□□ -0.89
ATR-201ENST00000350721 SENP3-EIF4A1A0A087X0R7 540 aa9.5□□□□□ -0.89
ATR-201ENST00000350721 NPM1P06748 294 aaKnown RBP eCLIP9.5□□□□□ -0.89
ATR-201ENST00000350721 CLUAP1Q96AJ1 413 aa9.5□□□□□ -0.89
ATR-201ENST00000350721 PRDM2Q13029 1718 aa9.5□□□□□ -0.89
ATR-201ENST00000350721 EFCAB2Q5VUJ9 269 aa9.5□□□□□ -0.89
ATR-201ENST00000350721 CT47B1P0C2W7 299 aaPredicted RBP9.49□□□□□ -0.89
ATR-201ENST00000350721 CTTNBP2Q8WZ74 1663 aa9.49□□□□□ -0.89
ATR-201ENST00000350721 DDX19BQ9UMR2 479 aa9.49□□□□□ -0.89
ATR-201ENST00000350721 KIF21AQ7Z4S6 1674 aa9.49□□□□□ -0.89
ATR-201ENST00000350721 RRP9O43818 475 aaKnown RBP9.49□□□□□ -0.89
ATR-201ENST00000350721 CSPP1Q1MSJ5 1256 aa9.49□□□□□ -0.89
ATR-201ENST00000350721 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.49□□□□□ -0.89
ATR-201ENST00000350721 POLA1P09884 1462 aaPredicted RBP9.48□□□□□ -0.89
ATR-201ENST00000350721 ZKSCAN2Q63HK3 967 aa9.48□□□□□ -0.89
ATR-201ENST00000350721 TOPBP1Q92547 1522 aa9.48□□□□□ -0.89
ATR-201ENST00000350721 EPRSP07814 1512 aaKnown RBP9.48□□□□□ -0.89
ATR-201ENST00000350721 DAPK1P53355 1430 aa9.48□□□□□ -0.89
ATR-201ENST00000350721 INSRP06213 1382 aa9.48□□□□□ -0.89
ATR-201ENST00000350721 ST18O60284 1047 aa9.47□□□□□ -0.89
ATR-201ENST00000350721 CIZ1Q9ULV3 898 aaPredicted RBP9.47□□□□□ -0.89
ATR-201ENST00000350721 TROQ12816 1431 aaPredicted RBP9.47□□□□□ -0.89
ATR-201ENST00000350721 GZF1Q9H116 711 aaPredicted RBP9.47□□□□□ -0.89
ATR-201ENST00000350721 NBPF8Q3BBV2 869 aa9.47□□□□□ -0.89
ATR-201ENST00000350721 TPM2P07951 284 aa9.47□□□□□ -0.89
ATR-201ENST00000350721 KIF16BQ96L93 1317 aa9.46□□□□□ -0.89
ATR-201ENST00000350721 RNF123Q5XPI4 1314 aa9.46□□□□□ -0.89
ATR-201ENST00000350721 STAG3Q9UJ98 1225 aa9.46□□□□□ -0.89
ATR-201ENST00000350721 SMC4Q9NTJ3 1288 aa9.46□□□□□ -0.89
ATR-201ENST00000350721 GOLGA6L6A8MZA4 724 aa9.46□□□□□ -0.9
ATR-201ENST00000350721 PLIN1O60240 522 aa9.46□□□□□ -0.9
ATR-201ENST00000350721 NUCB2P80303 420 aa9.46□□□□□ -0.9
ATR-201ENST00000350721 U2AF1L5P0DN76 240 aaPredicted RBP9.46□□□□□ -0.9
ATR-201ENST00000350721 U2AF1Q01081 240 aaKnown RBP eCLIP9.46□□□□□ -0.9
ATR-201ENST00000350721 RAD54L2Q9Y4B4 1467 aa9.45□□□□□ -0.9
ATR-201ENST00000350721 PRKCSHP14314 528 aaPredicted RBP9.45□□□□□ -0.9
ATR-201ENST00000350721 LMOD3Q0VAK6 560 aa9.45□□□□□ -0.9
ATR-201ENST00000350721 IQGAP2Q13576 1575 aa9.44□□□□□ -0.9
ATR-201ENST00000350721 HMMRO75330 724 aa9.44□□□□□ -0.9
ATR-201ENST00000350721 ZRSR1Q15695 479 aaKnown RBP9.44□□□□□ -0.9
ATR-201ENST00000350721 ITPRIPQ8IWB1 547 aa9.44□□□□□ -0.9
ATR-201ENST00000350721 IL27Q8NEV9 243 aa9.44□□□□□ -0.9
ATR-201ENST00000350721 GRIN2BQ13224 1484 aa9.44□□□□□ -0.9
ATR-201ENST00000350721 MFAP1P55081 439 aaKnown RBP9.44□□□□□ -0.9
ATR-201ENST00000350721 U2SURPO15042 1029 aaKnown RBP9.44□□□□□ -0.9
ATR-201ENST00000350721 FRAT2O75474 233 aaPredicted RBP9.44□□□□□ -0.9
ATR-201ENST00000350721 ATP6V1DQ9Y5K8 247 aa9.43□□□□□ -0.9
ATR-201ENST00000350721 TERF2IPQ9NYB0 399 aa9.43□□□□□ -0.9
ATR-201ENST00000350721 DDX49Q9Y6V7 483 aaKnown RBP9.43□□□□□ -0.9
ATR-201ENST00000350721 ARHGEF12Q9NZN5 1544 aa9.43□□□□□ -0.9
ATR-201ENST00000350721 APAF1O14727 1248 aa9.43□□□□□ -0.9
ATR-201ENST00000350721 REC8O95072 547 aa9.43□□□□□ -0.9
ATR-201ENST00000350721 CCDC184Q52MB2 194 aa9.43□□□□□ -0.9
ATR-201ENST00000350721 C22orf23Q9BZE7 217 aa9.43□□□□□ -0.9
ATR-201ENST00000350721 ZNF428Q96B54 188 aa9.42□□□□□ -0.9
ATR-201ENST00000350721 BRPF3Q9ULD4 1205 aa9.42□□□□□ -0.9
ATR-201ENST00000350721 UGGT2Q9NYU1 1516 aa9.42□□□□□ -0.9
ATR-201ENST00000350721 ITSN2Q9NZM3 1697 aa9.42□□□□□ -0.9
ATR-201ENST00000350721 RUNDC1Q96C34 613 aa9.42□□□□□ -0.9
ATR-201ENST00000350721 C9orf84Q5VXU9 1444 aa9.42□□□□□ -0.9
ATR-201ENST00000350721 DZIP1LQ8IYY4 767 aaKnown RBP9.42□□□□□ -0.9
ATR-201ENST00000350721 JPH4Q96JJ6 628 aa9.42□□□□□ -0.9
ATR-201ENST00000350721 HDAC5Q9UQL6 1122 aa9.42□□□□□ -0.9
ATR-201ENST00000350721 COG6Q9Y2V7 657 aa9.41□□□□□ -0.9
ATR-201ENST00000350721 GCC2Q8IWJ2 1684 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms