RNA–Protein interactions for RNA: ENST00000348286.6

DNMT3B-203, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-203ENST00000348286 KIAA1107Q9UPP5 1409 aa16.96■□□□□ 0.31
DNMT3B-203ENST00000348286 CLUAP1Q96AJ1 413 aa16.94■□□□□ 0.3
DNMT3B-203ENST00000348286 ABCC5O15440 1437 aa16.94■□□□□ 0.3
DNMT3B-203ENST00000348286 IFT140Q96RY7 1462 aa16.94■□□□□ 0.3
DNMT3B-203ENST00000348286 CRBNQ96SW2 442 aa16.94■□□□□ 0.3
DNMT3B-203ENST00000348286 PTPN23Q9H3S7 1636 aa16.94■□□□□ 0.3
DNMT3B-203ENST00000348286 PLB1Q6P1J6 1458 aa16.94■□□□□ 0.3
DNMT3B-203ENST00000348286 ARID4BQ4LE39 1312 aaPredicted RBP16.94■□□□□ 0.3
DNMT3B-203ENST00000348286 APAF1O14727 1248 aa16.93■□□□□ 0.3
DNMT3B-203ENST00000348286 PNISRQ8TF01 805 aaKnown RBP16.93■□□□□ 0.3
DNMT3B-203ENST00000348286 IPO9Q96P70 1041 aaKnown RBP16.93■□□□□ 0.3
DNMT3B-203ENST00000348286 HECW1Q76N89 1606 aa16.93■□□□□ 0.3
DNMT3B-203ENST00000348286 ZNF608Q9ULD9 1512 aaPredicted RBP16.93■□□□□ 0.3
DNMT3B-203ENST00000348286 WASHC2CQ9Y4E1 1318 aa16.93■□□□□ 0.3
DNMT3B-203ENST00000348286 KIAA0586Q9BVV6 1533 aa16.93■□□□□ 0.3
DNMT3B-203ENST00000348286 C9orf84Q5VXU9 1444 aa16.92■□□□□ 0.3
DNMT3B-203ENST00000348286 AKNAQ7Z591 1439 aa16.92■□□□□ 0.3
DNMT3B-203ENST00000348286 IQGAP2Q13576 1575 aa16.92■□□□□ 0.3
DNMT3B-203ENST00000348286 CUL7Q14999 1698 aa16.92■□□□□ 0.3
DNMT3B-203ENST00000348286 LAMC3Q9Y6N6 1575 aa16.92■□□□□ 0.3
DNMT3B-203ENST00000348286 EIF5BO60841 1220 aaKnown RBP16.92■□□□□ 0.3
DNMT3B-203ENST00000348286 BECN1Q14457 450 aa16.92■□□□□ 0.3
DNMT3B-203ENST00000348286 RTN4Q9NQC3 1192 aaKnown RBP16.92■□□□□ 0.3
DNMT3B-203ENST00000348286 SOX12O15370 315 aa16.91■□□□□ 0.3
DNMT3B-203ENST00000348286 BCL2L13Q9BXK5 485 aa16.89■□□□□ 0.29
DNMT3B-203ENST00000348286 ADAMTS8Q9UP79 889 aa16.89■□□□□ 0.29
DNMT3B-203ENST00000348286 PDE4AP27815 886 aa16.89■□□□□ 0.29
DNMT3B-203ENST00000348286 C14orf37Q86TY3 774 aa16.88■□□□□ 0.29
DNMT3B-203ENST00000348286 FANCIQ9NVI1 1328 aa16.88■□□□□ 0.29
DNMT3B-203ENST00000348286 MYH16Q9H6N6 1097 aa16.87■□□□□ 0.29
DNMT3B-203ENST00000348286 ROCK1Q13464 1354 aa16.87■□□□□ 0.29
DNMT3B-203ENST00000348286 ZBTB7CA1YPR0 619 aa16.87■□□□□ 0.29
DNMT3B-203ENST00000348286 EIF3AQ14152 1382 aaKnown RBP16.86■□□□□ 0.29
DNMT3B-203ENST00000348286 CFAP70Q5T0N1 1121 aa16.86■□□□□ 0.29
DNMT3B-203ENST00000348286 SLC4A3P48751 1232 aa16.86■□□□□ 0.29
DNMT3B-203ENST00000348286 SPRYD3Q8NCJ5 442 aa16.86■□□□□ 0.29
DNMT3B-203ENST00000348286 NCOA1Q15788 1441 aa16.84■□□□□ 0.29
DNMT3B-203ENST00000348286 SYNJ2O15056 1496 aa16.84■□□□□ 0.29
DNMT3B-203ENST00000348286 ARHGEF11O15085 1522 aa16.84■□□□□ 0.29
DNMT3B-203ENST00000348286 BRD4O60885 1362 aaPredicted RBP16.83■□□□□ 0.29
DNMT3B-203ENST00000348286 TMEM132EQ6IEE7 984 aa16.83■□□□□ 0.28
DNMT3B-203ENST00000348286 THOC2Q8NI27 1593 aaKnown RBP16.83■□□□□ 0.28
DNMT3B-203ENST00000348286 ARHGAP5Q13017 1502 aa16.82■□□□□ 0.28
DNMT3B-203ENST00000348286 CENPJQ9HC77 1338 aaPredicted RBP16.82■□□□□ 0.28
DNMT3B-203ENST00000348286 COG6Q9Y2V7 657 aa16.81■□□□□ 0.28
DNMT3B-203ENST00000348286 CAMSAP2Q08AD1 1489 aa16.8■□□□□ 0.28
DNMT3B-203ENST00000348286 SLKQ9H2G2 1235 aaPredicted RBP16.79■□□□□ 0.28
DNMT3B-203ENST00000348286 RPRD2Q5VT52 1461 aaKnown RBP16.79■□□□□ 0.28
DNMT3B-203ENST00000348286 HDGFL2Q7Z4V5 671 aaPredicted RBP16.79■□□□□ 0.28
DNMT3B-203ENST00000348286 GRIN2AQ12879 1464 aa16.79■□□□□ 0.28
DNMT3B-203ENST00000348286 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.78■□□□□ 0.28
DNMT3B-203ENST00000348286 ITPRIPQ8IWB1 547 aa16.77■□□□□ 0.28
DNMT3B-203ENST00000348286 PPP2R1AP30153 589 aa16.77■□□□□ 0.28
DNMT3B-203ENST00000348286 SMC4Q9NTJ3 1288 aa16.77■□□□□ 0.28
DNMT3B-203ENST00000348286 NUTM2FA1L443 756 aa16.75■□□□□ 0.27
DNMT3B-203ENST00000348286 MS4A1P11836 297 aa16.75■□□□□ 0.27
DNMT3B-203ENST00000348286 MINK1Q8N4C8 1332 aaPredicted RBP16.75■□□□□ 0.27
DNMT3B-203ENST00000348286 UGGT2Q9NYU1 1516 aa16.75■□□□□ 0.27
DNMT3B-203ENST00000348286 E9PSI1 815 aa16.74■□□□□ 0.27
DNMT3B-203ENST00000348286 MAGI1Q96QZ7 1491 aaPredicted RBP16.74■□□□□ 0.27
DNMT3B-203ENST00000348286 PAK3O75914 559 aaPredicted RBP16.74■□□□□ 0.27
DNMT3B-203ENST00000348286 CENPQQ7L2Z9 268 aaPredicted RBP16.74■□□□□ 0.27
DNMT3B-203ENST00000348286 ELL2O00472 640 aaPredicted RBP16.73■□□□□ 0.27
DNMT3B-203ENST00000348286 RWDD1Q9H446 243 aaPredicted RBP16.73■□□□□ 0.27
DNMT3B-203ENST00000348286 TERF2IPQ9NYB0 399 aa16.73■□□□□ 0.27
DNMT3B-203ENST00000348286 APBB1O00213 710 aa16.72■□□□□ 0.27
DNMT3B-203ENST00000348286 MSH5O43196 834 aa16.72■□□□□ 0.27
DNMT3B-203ENST00000348286 PNNQ9H307 717 aaKnown RBP16.72■□□□□ 0.27
DNMT3B-203ENST00000348286 VGFO15240 615 aaPredicted RBP16.72■□□□□ 0.27
DNMT3B-203ENST00000348286 CYB5RLQ6IPT4 315 aa16.72■□□□□ 0.27
DNMT3B-203ENST00000348286 SLC12A5Q9H2X9 1139 aa16.71■□□□□ 0.27
DNMT3B-203ENST00000348286 SKAP1Q86WV1 359 aa16.71■□□□□ 0.27
DNMT3B-203ENST00000348286 GPATCH8Q9UKJ3 1502 aaKnown RBP16.71■□□□□ 0.27
DNMT3B-203ENST00000348286 SMG6Q86US8 1419 aaKnown RBP16.71■□□□□ 0.26
DNMT3B-203ENST00000348286 ANP32BQ92688 251 aaKnown RBP16.7■□□□□ 0.26
DNMT3B-203ENST00000348286 CGNL1Q0VF96 1302 aa16.7■□□□□ 0.26
DNMT3B-203ENST00000348286 SCAPERQ9BY12 1400 aa16.7■□□□□ 0.26
DNMT3B-203ENST00000348286 NUP153P49790 1475 aaKnown RBP16.69■□□□□ 0.26
DNMT3B-203ENST00000348286 PANK1Q8TE04 598 aa16.69■□□□□ 0.26
DNMT3B-203ENST00000348286 FAM161AQ3B820 660 aa16.68■□□□□ 0.26
DNMT3B-203ENST00000348286 CABP2Q9NPB3 220 aa16.68■□□□□ 0.26
DNMT3B-203ENST00000348286 LMOD2Q6P5Q4 547 aa16.68■□□□□ 0.26
DNMT3B-203ENST00000348286 EVC2Q86UK5 1308 aa16.68■□□□□ 0.26
DNMT3B-203ENST00000348286 MTHFSP49914 203 aa16.68■□□□□ 0.26
DNMT3B-203ENST00000348286 GGNBP2Q9H3C7 697 aa16.68■□□□□ 0.26
DNMT3B-203ENST00000348286 PMFBP1Q8TBY8 1022 aa16.67■□□□□ 0.26
DNMT3B-203ENST00000348286 IPO8O15397 1037 aaKnown RBP16.67■□□□□ 0.26
DNMT3B-203ENST00000348286 MFAP1P55081 439 aaKnown RBP16.67■□□□□ 0.26
DNMT3B-203ENST00000348286 BCAR3O75815 825 aa16.66■□□□□ 0.26
DNMT3B-203ENST00000348286 OSCARQ8IYS5 282 aa16.66■□□□□ 0.26
DNMT3B-203ENST00000348286 CFAP43Q8NDM7 1665 aa16.66■□□□□ 0.26
DNMT3B-203ENST00000348286 NCLP19338 710 aaKnown RBP16.66■□□□□ 0.26
DNMT3B-203ENST00000348286 ERBINQ96RT1 1412 aa16.66■□□□□ 0.26
DNMT3B-203ENST00000348286 HSP90AB1P08238 724 aaKnown RBP16.64■□□□□ 0.25
DNMT3B-203ENST00000348286 TCP11L2Q8N4U5 519 aa16.64■□□□□ 0.25
DNMT3B-203ENST00000348286 STAC3Q96MF2 364 aa16.64■□□□□ 0.25
DNMT3B-203ENST00000348286 CTTNBP2Q8WZ74 1663 aa16.64■□□□□ 0.25
DNMT3B-203ENST00000348286 CCDC141Q6ZP82 1450 aa16.64■□□□□ 0.25
DNMT3B-203ENST00000348286 TPRNQ4KMQ1 711 aa16.64■□□□□ 0.25
DNMT3B-203ENST00000348286 RUNDC1Q96C34 613 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms