RNA–Protein interactions for RNA: ENST00000348069.6

NLRP3-202, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-202ENST00000348069 SUPT6HQ7KZ85 1726 aaKnown RBP10.69□□□□□ -0.7
NLRP3-202ENST00000348069 CCDC184Q52MB2 194 aa10.68□□□□□ -0.7
NLRP3-202ENST00000348069 CC2D1BQ5T0F9 858 aaKnown RBP10.68□□□□□ -0.7
NLRP3-202ENST00000348069 CAMSAP2Q08AD1 1489 aa10.68□□□□□ -0.7
NLRP3-202ENST00000348069 NBPF1Q3BBV0 1214 aa10.67□□□□□ -0.7
NLRP3-202ENST00000348069 ZBED9Q6R2W3 1325 aa10.67□□□□□ -0.7
NLRP3-202ENST00000348069 PTPN23Q9H3S7 1636 aa10.67□□□□□ -0.7
NLRP3-202ENST00000348069 PPM1GO15355 546 aaPredicted RBP10.67□□□□□ -0.7
NLRP3-202ENST00000348069 WASHC2AQ641Q2 1341 aa10.67□□□□□ -0.7
NLRP3-202ENST00000348069 RAPGEF6Q8TEU7 1601 aa10.66□□□□□ -0.7
NLRP3-202ENST00000348069 SAMD9Q5K651 1589 aa10.66□□□□□ -0.7
NLRP3-202ENST00000348069 NCOA1Q15788 1441 aa10.66□□□□□ -0.7
NLRP3-202ENST00000348069 NUDCQ9Y266 331 aa10.65□□□□□ -0.7
NLRP3-202ENST00000348069 KANK1Q14678 1352 aa10.65□□□□□ -0.7
NLRP3-202ENST00000348069 ROCK2O75116 1388 aaKnown RBP10.65□□□□□ -0.71
NLRP3-202ENST00000348069 TRAK1Q9UPV9 953 aa10.64□□□□□ -0.71
NLRP3-202ENST00000348069 CCDC144AA2RUR9 1427 aa10.63□□□□□ -0.71
NLRP3-202ENST00000348069 TMEM132EQ6IEE7 984 aa10.63□□□□□ -0.71
NLRP3-202ENST00000348069 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
NLRP3-202ENST00000348069 IL27Q8NEV9 243 aa10.62□□□□□ -0.71
NLRP3-202ENST00000348069 DDRGK1Q96HY6 314 aa10.62□□□□□ -0.71
NLRP3-202ENST00000348069 C11orf95C9JLR9 678 aaPredicted RBP10.62□□□□□ -0.71
NLRP3-202ENST00000348069 CD109Q6YHK3 1445 aa10.61□□□□□ -0.71
NLRP3-202ENST00000348069 LRRIQ1Q96JM4 1722 aa10.61□□□□□ -0.71
NLRP3-202ENST00000348069 ASXL2Q76L83 1435 aa10.61□□□□□ -0.71
NLRP3-202ENST00000348069 ARXQ96QS3 562 aa10.61□□□□□ -0.71
NLRP3-202ENST00000348069 PLEKHH2Q8IVE3 1493 aa10.61□□□□□ -0.71
NLRP3-202ENST00000348069 KIF14Q15058 1648 aa10.6□□□□□ -0.71
NLRP3-202ENST00000348069 TRAPPC8Q9Y2L5 1435 aa10.6□□□□□ -0.71
NLRP3-202ENST00000348069 TCERG1O14776 1098 aaKnown RBP10.59□□□□□ -0.71
NLRP3-202ENST00000348069 CFAP70Q5T0N1 1121 aa10.59□□□□□ -0.71
NLRP3-202ENST00000348069 AKNAQ7Z591 1439 aa10.59□□□□□ -0.71
NLRP3-202ENST00000348069 KDM5BQ9UGL1 1544 aa10.58□□□□□ -0.72
NLRP3-202ENST00000348069 POGKQ9P215 609 aa10.58□□□□□ -0.72
NLRP3-202ENST00000348069 FBXO31Q5XUX0 539 aaPredicted RBP10.57□□□□□ -0.72
NLRP3-202ENST00000348069 PDE4AP27815 886 aa10.57□□□□□ -0.72
NLRP3-202ENST00000348069 RCAN3Q9UKA8 241 aa10.57□□□□□ -0.72
NLRP3-202ENST00000348069 SOX12O15370 315 aa10.57□□□□□ -0.72
NLRP3-202ENST00000348069 USP47Q96K76 1375 aa10.56□□□□□ -0.72
NLRP3-202ENST00000348069 ANKRD30BQ9BXX2 1392 aa10.56□□□□□ -0.72
NLRP3-202ENST00000348069 CNTLNQ9NXG0 1405 aa10.56□□□□□ -0.72
NLRP3-202ENST00000348069 EXOC6Q8TAG9 804 aa10.56□□□□□ -0.72
NLRP3-202ENST00000348069 FANCAO15360 1455 aa10.56□□□□□ -0.72
NLRP3-202ENST00000348069 TCOF1Q13428 1488 aaKnown RBP10.56□□□□□ -0.72
NLRP3-202ENST00000348069 CCDC7Q96M83 1385 aa10.56□□□□□ -0.72
NLRP3-202ENST00000348069 CCDC141Q6ZP82 1450 aa10.56□□□□□ -0.72
NLRP3-202ENST00000348069 CHD1O14646 1710 aa10.56□□□□□ -0.72
NLRP3-202ENST00000348069 GCC2Q8IWJ2 1684 aa10.56□□□□□ -0.72
NLRP3-202ENST00000348069 SYCP2Q9BX26 1530 aa10.55□□□□□ -0.72
NLRP3-202ENST00000348069 ADGRL1O94910 1474 aa10.55□□□□□ -0.72
NLRP3-202ENST00000348069 CANXP27824 592 aaKnown RBP10.54□□□□□ -0.72
NLRP3-202ENST00000348069 CEBPAP49715 358 aaPredicted RBP10.54□□□□□ -0.72
NLRP3-202ENST00000348069 RGS3P49796 1198 aa10.54□□□□□ -0.72
NLRP3-202ENST00000348069 SRPK2P78362 688 aaKnown RBP10.54□□□□□ -0.72
NLRP3-202ENST00000348069 USP35Q9P2H5 1018 aa10.54□□□□□ -0.72
NLRP3-202ENST00000348069 KNSTRNQ9Y448 316 aa10.54□□□□□ -0.72
NLRP3-202ENST00000348069 KIF7Q2M1P5 1343 aa10.54□□□□□ -0.72
NLRP3-202ENST00000348069 ROCK1Q13464 1354 aa10.54□□□□□ -0.72
NLRP3-202ENST00000348069 KIAA1107Q9UPP5 1409 aa10.54□□□□□ -0.72
NLRP3-202ENST00000348069 SLC4A3P48751 1232 aa10.54□□□□□ -0.72
NLRP3-202ENST00000348069 NEUROD2Q15784 382 aa10.54□□□□□ -0.72
NLRP3-202ENST00000348069 TMF1P82094 1093 aa10.54□□□□□ -0.72
NLRP3-202ENST00000348069 PLCH2O75038 1416 aa10.53□□□□□ -0.72
NLRP3-202ENST00000348069 PANK3Q9H999 370 aa10.51□□□□□ -0.73
NLRP3-202ENST00000348069 C14orf37Q86TY3 774 aa10.51□□□□□ -0.73
NLRP3-202ENST00000348069 ABCC2Q92887 1545 aa10.51□□□□□ -0.73
NLRP3-202ENST00000348069 ZBTB7CA1YPR0 619 aa10.51□□□□□ -0.73
NLRP3-202ENST00000348069 RRP1P56182 461 aaKnown RBP10.51□□□□□ -0.73
NLRP3-202ENST00000348069 KDM6BO15054 1643 aa10.51□□□□□ -0.73
NLRP3-202ENST00000348069 GSE1Q14687 1217 aa10.5□□□□□ -0.73
NLRP3-202ENST00000348069 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.5□□□□□ -0.73
NLRP3-202ENST00000348069 PLIN1O60240 522 aa10.5□□□□□ -0.73
NLRP3-202ENST00000348069 DENND4BO75064 1496 aaPredicted RBP10.5□□□□□ -0.73
NLRP3-202ENST00000348069 WDR7Q9Y4E6 1490 aa10.5□□□□□ -0.73
NLRP3-202ENST00000348069 MINK1Q8N4C8 1332 aaPredicted RBP10.5□□□□□ -0.73
NLRP3-202ENST00000348069 WDR43Q15061 677 aaKnown RBP eCLIP10.49□□□□□ -0.73
NLRP3-202ENST00000348069 BRPF3Q9ULD4 1205 aa10.49□□□□□ -0.73
NLRP3-202ENST00000348069 ABCA8O94911 1581 aa10.48□□□□□ -0.73
NLRP3-202ENST00000348069 IDI1Q13907 227 aa10.47□□□□□ -0.73
NLRP3-202ENST00000348069 GLIPR1L2Q4G1C9 344 aa10.47□□□□□ -0.73
NLRP3-202ENST00000348069 ADGRF5Q8IZF2 1346 aa10.47□□□□□ -0.73
NLRP3-202ENST00000348069 UPF2Q9HAU5 1272 aaKnown RBP10.47□□□□□ -0.73
NLRP3-202ENST00000348069 LMOD2Q6P5Q4 547 aa10.46□□□□□ -0.73
NLRP3-202ENST00000348069 RBM33Q96EV2 1170 aaKnown RBP10.46□□□□□ -0.73
NLRP3-202ENST00000348069 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.45□□□□□ -0.74
NLRP3-202ENST00000348069 ABCC10Q5T3U5 1492 aa10.45□□□□□ -0.74
NLRP3-202ENST00000348069 SMG6Q86US8 1419 aaKnown RBP10.45□□□□□ -0.74
NLRP3-202ENST00000348069 MS4A1P11836 297 aa10.45□□□□□ -0.74
NLRP3-202ENST00000348069 NFKBIBQ15653 356 aa10.44□□□□□ -0.74
NLRP3-202ENST00000348069 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.44□□□□□ -0.74
NLRP3-202ENST00000348069 SLC26A8Q96RN1 970 aa10.44□□□□□ -0.74
NLRP3-202ENST00000348069 RALBP1Q15311 655 aa10.44□□□□□ -0.74
NLRP3-202ENST00000348069 CABP2Q9NPB3 220 aa10.44□□□□□ -0.74
NLRP3-202ENST00000348069 MBD5Q9P267 1494 aa10.44□□□□□ -0.74
NLRP3-202ENST00000348069 BECN1Q14457 450 aa10.44□□□□□ -0.74
NLRP3-202ENST00000348069 BACH2Q9BYV9 841 aa10.43□□□□□ -0.74
NLRP3-202ENST00000348069 VGFO15240 615 aaPredicted RBP10.43□□□□□ -0.74
NLRP3-202ENST00000348069 CRBNQ96SW2 442 aa10.43□□□□□ -0.74
NLRP3-202ENST00000348069 ZMYND15Q9H091 742 aa10.43□□□□□ -0.74
NLRP3-202ENST00000348069 CCDC146Q8IYE0 955 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms