RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 HECW1Q76N89 1606 aa21.08■□□□□ 0.97
MBD1-204ENST00000347968 PLB1Q6P1J6 1458 aa21.06■□□□□ 0.96
MBD1-204ENST00000347968 NAIPQ13075 1403 aa21.05■□□□□ 0.96
MBD1-204ENST00000347968 GOLGA6L3A6NEY3 463 aa21.05■□□□□ 0.96
MBD1-204ENST00000347968 NUP160Q12769 1436 aa21.05■□□□□ 0.96
MBD1-204ENST00000347968 ERBB4Q15303 1308 aa21.04■□□□□ 0.96
MBD1-204ENST00000347968 EHBP1L1Q8N3D4 1523 aa21.04■□□□□ 0.96
MBD1-204ENST00000347968 HFM1A2PYH4 1435 aa21.04■□□□□ 0.96
MBD1-204ENST00000347968 MYOM3Q5VTT5 1437 aa21.03■□□□□ 0.96
MBD1-204ENST00000347968 NUP153P49790 1475 aaKnown RBP21.02■□□□□ 0.96
MBD1-204ENST00000347968 AAMPQ13685 434 aa21.02■□□□□ 0.96
MBD1-204ENST00000347968 SUPT6HQ7KZ85 1726 aaKnown RBP21.02■□□□□ 0.96
MBD1-204ENST00000347968 PTPN23Q9H3S7 1636 aa21.01■□□□□ 0.95
MBD1-204ENST00000347968 SEC24BO95487 1268 aa21.01■□□□□ 0.95
MBD1-204ENST00000347968 MPHOSPH9Q99550 1183 aa20.99■□□□□ 0.95
MBD1-204ENST00000347968 KTN1Q86UP2 1357 aaKnown RBP20.98■□□□□ 0.95
MBD1-204ENST00000347968 CARMIL2Q6F5E8 1435 aa20.98■□□□□ 0.95
MBD1-204ENST00000347968 RAPGEF6Q8TEU7 1601 aa20.97■□□□□ 0.95
MBD1-204ENST00000347968 PRDM4Q9UKN5 801 aa20.96■□□□□ 0.95
MBD1-204ENST00000347968 DENND4BO75064 1496 aaPredicted RBP20.96■□□□□ 0.95
MBD1-204ENST00000347968 KDM2BQ8NHM5 1336 aa20.95■□□□□ 0.95
MBD1-204ENST00000347968 ZNF644Q9H582 1327 aaPredicted RBP20.95■□□□□ 0.95
MBD1-204ENST00000347968 PRG4Q92954 1404 aaPredicted RBP20.95■□□□□ 0.94
MBD1-204ENST00000347968 ESPNB1AK53 854 aa20.95■□□□□ 0.94
MBD1-204ENST00000347968 SLC24A1O60721 1099 aa20.93■□□□□ 0.94
MBD1-204ENST00000347968 CHD1O14646 1710 aa20.92■□□□□ 0.94
MBD1-204ENST00000347968 CENPQQ7L2Z9 268 aaPredicted RBP20.91■□□□□ 0.94
MBD1-204ENST00000347968 ARHGEF11O15085 1522 aa20.91■□□□□ 0.94
MBD1-204ENST00000347968 SPATA31E1Q6ZUB1 1445 aa20.91■□□□□ 0.94
MBD1-204ENST00000347968 USP19O94966 1318 aa20.9■□□□□ 0.94
MBD1-204ENST00000347968 FGD1P98174 961 aa20.9■□□□□ 0.94
MBD1-204ENST00000347968 ZNF777Q9ULD5 760 aaPredicted RBP20.9■□□□□ 0.94
MBD1-204ENST00000347968 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.89■□□□□ 0.94
MBD1-204ENST00000347968 PDCL3Q9H2J4 239 aa20.89■□□□□ 0.93
MBD1-204ENST00000347968 MYH16Q9H6N6 1097 aa20.89■□□□□ 0.93
MBD1-204ENST00000347968 LRPPRCP42704 1394 aaKnown RBP20.88■□□□□ 0.93
MBD1-204ENST00000347968 KIAA1211Q6ZU35 1233 aa20.88■□□□□ 0.93
MBD1-204ENST00000347968 FSD2A1L4K1 749 aa20.88■□□□□ 0.93
MBD1-204ENST00000347968 PRDM10Q9NQV6 1147 aa20.88■□□□□ 0.93
MBD1-204ENST00000347968 ZHX1Q9UKY1 873 aaPredicted RBP20.88■□□□□ 0.93
MBD1-204ENST00000347968 FAM13BQ9NYF5 915 aa20.86■□□□□ 0.93
MBD1-204ENST00000347968 USP47Q96K76 1375 aa20.85■□□□□ 0.93
MBD1-204ENST00000347968 BECN1Q14457 450 aa20.85■□□□□ 0.93
MBD1-204ENST00000347968 TRIM44Q96DX7 344 aaPredicted RBP20.85■□□□□ 0.93
MBD1-204ENST00000347968 MYBBP1AQ9BQG0 1328 aaKnown RBP20.84■□□□□ 0.93
MBD1-204ENST00000347968 CALD1Q05682 793 aaKnown RBP20.84■□□□□ 0.93
MBD1-204ENST00000347968 PTPRGP23470 1445 aa20.83■□□□□ 0.93
MBD1-204ENST00000347968 ANTXR1Q9H6X2 564 aa20.83■□□□□ 0.93
MBD1-204ENST00000347968 ERCC6L2Q5T890 1561 aa20.82■□□□□ 0.92
MBD1-204ENST00000347968 TRAK2O60296 914 aa20.81■□□□□ 0.92
MBD1-204ENST00000347968 MCM4P33991 863 aa20.81■□□□□ 0.92
MBD1-204ENST00000347968 GRPEL1Q9HAV7 217 aa20.81■□□□□ 0.92
MBD1-204ENST00000347968 KDM6BO15054 1643 aa20.81■□□□□ 0.92
MBD1-204ENST00000347968 CFDP1Q9UEE9 299 aaPredicted RBP20.8■□□□□ 0.92
MBD1-204ENST00000347968 TROQ12816 1431 aaPredicted RBP20.8■□□□□ 0.92
MBD1-204ENST00000347968 KIF14Q15058 1648 aa20.8■□□□□ 0.92
MBD1-204ENST00000347968 PLEKHD1A6NEE1 506 aa20.79■□□□□ 0.92
MBD1-204ENST00000347968 PDE4CQ08493 712 aa20.79■□□□□ 0.92
MBD1-204ENST00000347968 PDE3BQ13370 1112 aa20.79■□□□□ 0.92
MBD1-204ENST00000347968 TBC1D2Q9BYX2 928 aa20.79■□□□□ 0.92
MBD1-204ENST00000347968 ATP10BO94823 1461 aa20.78■□□□□ 0.92
MBD1-204ENST00000347968 BCORL1Q5H9F3 1711 aa20.78■□□□□ 0.92
MBD1-204ENST00000347968 CC2D1BQ5T0F9 858 aaKnown RBP20.78■□□□□ 0.92
MBD1-204ENST00000347968 TCOF1Q13428 1488 aaKnown RBP20.77■□□□□ 0.92
MBD1-204ENST00000347968 TPM2P07951 284 aa20.77■□□□□ 0.92
MBD1-204ENST00000347968 MRE11P49959 708 aa20.77■□□□□ 0.92
MBD1-204ENST00000347968 SLC4A1APQ9BWU0 796 aaKnown RBP20.77■□□□□ 0.92
MBD1-204ENST00000347968 BRD4O60885 1362 aaPredicted RBP20.77■□□□□ 0.92
MBD1-204ENST00000347968 KIF15Q9NS87 1388 aa20.76■□□□□ 0.91
MBD1-204ENST00000347968 ABCA8O94911 1581 aa20.76■□□□□ 0.91
MBD1-204ENST00000347968 IGHDP01880 384 aa20.76■□□□□ 0.91
MBD1-204ENST00000347968 MIA2Q96PC5 1412 aa20.75■□□□□ 0.91
MBD1-204ENST00000347968 RIPK4P57078 832 aa20.75■□□□□ 0.91
MBD1-204ENST00000347968 GAS2L3Q86XJ1 694 aa20.74■□□□□ 0.91
MBD1-204ENST00000347968 BCL11BQ9C0K0 894 aaPredicted RBP20.72■□□□□ 0.91
MBD1-204ENST00000347968 ST20-MTHFSA0A0A6YYL1 179 aa20.72■□□□□ 0.91
MBD1-204ENST00000347968 NLRP13Q86W25 1043 aa20.72■□□□□ 0.91
MBD1-204ENST00000347968 KDM2AQ9Y2K7 1162 aa20.72■□□□□ 0.91
MBD1-204ENST00000347968 TEX14Q8IWB6 1497 aa20.71■□□□□ 0.91
MBD1-204ENST00000347968 ZBTB7CA1YPR0 619 aa20.7■□□□□ 0.9
MBD1-204ENST00000347968 R3HCC1Q9Y3T6 440 aaKnown RBP20.7■□□□□ 0.9
MBD1-204ENST00000347968 GPATCH8Q9UKJ3 1502 aaKnown RBP20.7■□□□□ 0.9
MBD1-204ENST00000347968 ANKRD30BQ9BXX2 1392 aa20.7■□□□□ 0.9
MBD1-204ENST00000347968 ABCC5O15440 1437 aa20.7■□□□□ 0.9
MBD1-204ENST00000347968 DAPK1P53355 1430 aa20.7■□□□□ 0.9
MBD1-204ENST00000347968 RALBP1Q15311 655 aa20.69■□□□□ 0.9
MBD1-204ENST00000347968 CARD11Q9BXL7 1154 aa20.69■□□□□ 0.9
MBD1-204ENST00000347968 CENPJQ9HC77 1338 aaPredicted RBP20.68■□□□□ 0.9
MBD1-204ENST00000347968 RPRD2Q5VT52 1461 aaKnown RBP20.67■□□□□ 0.9
MBD1-204ENST00000347968 CAMSAP2Q08AD1 1489 aa20.66■□□□□ 0.9
MBD1-204ENST00000347968 BCAR3O75815 825 aa20.66■□□□□ 0.9
MBD1-204ENST00000347968 BBXQ8WY36 941 aaPredicted RBP20.64■□□□□ 0.89
MBD1-204ENST00000347968 HNRNPMP52272 730 aaKnown RBP eCLIP20.62■□□□□ 0.89
MBD1-204ENST00000347968 ADAMTS8Q9UP79 889 aa20.62■□□□□ 0.89
MBD1-204ENST00000347968 SHROOM2Q13796 1616 aa20.62■□□□□ 0.89
MBD1-204ENST00000347968 DUSP27Q5VZP5 1158 aa20.61■□□□□ 0.89
MBD1-204ENST00000347968 AEBP2Q6ZN18 517 aaPredicted RBP20.61■□□□□ 0.89
MBD1-204ENST00000347968 UPF2Q9HAU5 1272 aaKnown RBP20.61■□□□□ 0.89
MBD1-204ENST00000347968 DNMT1P26358 1616 aaKnown RBP20.59■□□□□ 0.89
MBD1-204ENST00000347968 POLR1AO95602 1720 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms