RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 NOC3LQ8WTT2 800 aaKnown RBP14.97□□□□□ -0.01
COL12A1-202ENST00000345356 ABCC8Q09428 1581 aa14.97□□□□□ -0.01
COL12A1-202ENST00000345356 TULP1O00294 542 aaPredicted RBP14.97□□□□□ -0.01
COL12A1-202ENST00000345356 TEX35Q5T0J7 233 aa14.97□□□□□ -0.01
COL12A1-202ENST00000345356 HAP1P54257 671 aaPredicted RBP14.97□□□□□ -0.01
COL12A1-202ENST00000345356 GNL2Q13823 731 aaKnown RBP14.96□□□□□ -0.01
COL12A1-202ENST00000345356 TRIM6-TRIM34B2RNG4 842 aa14.96□□□□□ -0.01
COL12A1-202ENST00000345356 PLEKHG5O94827 1062 aa14.95□□□□□ -0.02
COL12A1-202ENST00000345356 CCDC39Q9UFE4 941 aa14.95□□□□□ -0.02
COL12A1-202ENST00000345356 BCL2L13Q9BXK5 485 aa14.95□□□□□ -0.02
COL12A1-202ENST00000345356 POGKQ9P215 609 aa14.94□□□□□ -0.02
COL12A1-202ENST00000345356 GPS2Q13227 327 aa14.94□□□□□ -0.02
COL12A1-202ENST00000345356 MCTP1Q6DN14 999 aa14.94□□□□□ -0.02
COL12A1-202ENST00000345356 CCAR2Q8N163 923 aaKnown RBP14.94□□□□□ -0.02
COL12A1-202ENST00000345356 BACH2Q9BYV9 841 aa14.94□□□□□ -0.02
COL12A1-202ENST00000345356 GOLGA6L19H0YKK7 550 aa14.93□□□□□ -0.02
COL12A1-202ENST00000345356 PLPPR3Q6T4P5 718 aa14.93□□□□□ -0.02
COL12A1-202ENST00000345356 HSP90B1P14625 803 aaKnown RBP14.92□□□□□ -0.02
COL12A1-202ENST00000345356 C22orf23Q9BZE7 217 aa14.92□□□□□ -0.02
COL12A1-202ENST00000345356 DIAPH3Q9NSV4 1193 aa14.92□□□□□ -0.02
COL12A1-202ENST00000345356 ANKRD45Q5TZF3 282 aa14.92□□□□□ -0.02
COL12A1-202ENST00000345356 CCDC66A2RUB6 948 aa14.92□□□□□ -0.02
COL12A1-202ENST00000345356 CCDC173Q0VFZ6 552 aa14.92□□□□□ -0.02
COL12A1-202ENST00000345356 E9PSI1 815 aa14.91□□□□□ -0.02
COL12A1-202ENST00000345356 CHMP7Q8WUX9 453 aaPredicted RBP14.91□□□□□ -0.02
COL12A1-202ENST00000345356 ATP6V1DQ9Y5K8 247 aa14.9□□□□□ -0.02
COL12A1-202ENST00000345356 BECN2A8MW95 431 aa14.9□□□□□ -0.02
COL12A1-202ENST00000345356 ESPNB1AK53 854 aa14.89□□□□□ -0.03
COL12A1-202ENST00000345356 HMMRO75330 724 aa14.89□□□□□ -0.03
COL12A1-202ENST00000345356 NUCB2P80303 420 aa14.89□□□□□ -0.03
COL12A1-202ENST00000345356 RRP7AQ9Y3A4 280 aaKnown RBP14.89□□□□□ -0.03
COL12A1-202ENST00000345356 CARMIL1Q5VZK9 1371 aa14.89□□□□□ -0.03
COL12A1-202ENST00000345356 APPP05067 770 aa14.88□□□□□ -0.03
COL12A1-202ENST00000345356 ZMYND15Q9H091 742 aa14.88□□□□□ -0.03
COL12A1-202ENST00000345356 ST20-MTHFSA0A0A6YYL1 179 aa14.88□□□□□ -0.03
COL12A1-202ENST00000345356 ZKSCAN2Q63HK3 967 aa14.88□□□□□ -0.03
COL12A1-202ENST00000345356 RNF214Q8ND24 703 aa14.88□□□□□ -0.03
COL12A1-202ENST00000345356 IFT57Q9NWB7 429 aa14.88□□□□□ -0.03
COL12A1-202ENST00000345356 GRPEL1Q9HAV7 217 aa14.88□□□□□ -0.03
COL12A1-202ENST00000345356 SRPK2P78362 688 aaKnown RBP14.87□□□□□ -0.03
COL12A1-202ENST00000345356 TPM3P06753 285 aa14.87□□□□□ -0.03
COL12A1-202ENST00000345356 NOM1Q5C9Z4 860 aaKnown RBP14.87□□□□□ -0.03
COL12A1-202ENST00000345356 CECR2Q9BXF3 1484 aa14.87□□□□□ -0.03
COL12A1-202ENST00000345356 BCL11BQ9C0K0 894 aaPredicted RBP14.86□□□□□ -0.03
COL12A1-202ENST00000345356 NPM1P06748 294 aaKnown RBP eCLIP14.86□□□□□ -0.03
COL12A1-202ENST00000345356 HMGN5P82970 282 aaKnown RBP14.86□□□□□ -0.03
COL12A1-202ENST00000345356 UQCRHLA0A096LP55 91 aa14.86□□□□□ -0.03
COL12A1-202ENST00000345356 UQCRHP07919 91 aa14.86□□□□□ -0.03
COL12A1-202ENST00000345356 PANK3Q9H999 370 aa14.86□□□□□ -0.03
COL12A1-202ENST00000345356 CNTLNQ9NXG0 1405 aa14.86□□□□□ -0.03
COL12A1-202ENST00000345356 AKNAQ7Z591 1439 aa14.85□□□□□ -0.03
COL12A1-202ENST00000345356 CAVIN1Q6NZI2 390 aaKnown RBP14.85□□□□□ -0.03
COL12A1-202ENST00000345356 CCDC7Q96M83 1385 aa14.84□□□□□ -0.03
COL12A1-202ENST00000345356 HOMER1Q86YM7 354 aa14.84□□□□□ -0.03
COL12A1-202ENST00000345356 NUP155O75694 1391 aa14.84□□□□□ -0.03
COL12A1-202ENST00000345356 ARGLU1Q9NWB6 273 aaPredicted RBP14.84□□□□□ -0.03
COL12A1-202ENST00000345356 ISY1Q9ULR0 285 aaKnown RBP14.83□□□□□ -0.03
COL12A1-202ENST00000345356 SAFB2Q14151 953 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL12A1-202ENST00000345356 RTF1Q92541 710 aaKnown RBP14.83□□□□□ -0.04
COL12A1-202ENST00000345356 USP47Q96K76 1375 aa14.83□□□□□ -0.04
COL12A1-202ENST00000345356 APAF1O14727 1248 aa14.83□□□□□ -0.04
COL12A1-202ENST00000345356 CHMP3Q9Y3E7 222 aa14.82□□□□□ -0.04
COL12A1-202ENST00000345356 A0A0G2JS52 829 aa14.82□□□□□ -0.04
COL12A1-202ENST00000345356 SF3A1Q15459 793 aaKnown RBP14.82□□□□□ -0.04
COL12A1-202ENST00000345356 REC8O95072 547 aa14.81□□□□□ -0.04
COL12A1-202ENST00000345356 RILPL2Q969X0 211 aa14.81□□□□□ -0.04
COL12A1-202ENST00000345356 SLC4A10Q6U841 1118 aa14.81□□□□□ -0.04
COL12A1-202ENST00000345356 KIF7Q2M1P5 1343 aa14.8□□□□□ -0.04
COL12A1-202ENST00000345356 WASHC2AQ641Q2 1341 aa14.8□□□□□ -0.04
COL12A1-202ENST00000345356 CREBRFQ8IUR6 639 aa14.8□□□□□ -0.04
COL12A1-202ENST00000345356 CUX2O14529 1486 aa14.8□□□□□ -0.04
COL12A1-202ENST00000345356 CCDC34Q96HJ3 373 aa14.8□□□□□ -0.04
COL12A1-202ENST00000345356 CWC15Q9P013 229 aaKnown RBP14.8□□□□□ -0.04
COL12A1-202ENST00000345356 DDX19BQ9UMR2 479 aa14.8□□□□□ -0.04
COL12A1-202ENST00000345356 H3BQV1 296 aa14.79□□□□□ -0.04
COL12A1-202ENST00000345356 IFFO2Q5TF58 517 aa14.79□□□□□ -0.04
COL12A1-202ENST00000345356 MNS1Q8NEH6 495 aa14.79□□□□□ -0.04
COL12A1-202ENST00000345356 GPATCH3Q96I76 525 aa14.79□□□□□ -0.04
COL12A1-202ENST00000345356 BAZ1AQ9NRL2 1556 aaPredicted RBP14.79□□□□□ -0.04
COL12A1-202ENST00000345356 PRDM10Q9NQV6 1147 aa14.79□□□□□ -0.04
COL12A1-202ENST00000345356 SOX12O15370 315 aa14.78□□□□□ -0.04
COL12A1-202ENST00000345356 DZIP1LQ8IYY4 767 aaKnown RBP14.78□□□□□ -0.04
COL12A1-202ENST00000345356 EIF3AQ14152 1382 aaKnown RBP14.78□□□□□ -0.04
COL12A1-202ENST00000345356 PDCL3Q9H2J4 239 aa14.78□□□□□ -0.04
COL12A1-202ENST00000345356 PANK1Q8TE04 598 aa14.77□□□□□ -0.04
COL12A1-202ENST00000345356 MCM4P33991 863 aa14.77□□□□□ -0.04
COL12A1-202ENST00000345356 CDCA7LQ96GN5 454 aa14.77□□□□□ -0.04
COL12A1-202ENST00000345356 MAPK8IP2Q13387 824 aaPredicted RBP14.77□□□□□ -0.04
COL12A1-202ENST00000345356 KIF3AQ9Y496 699 aa14.77□□□□□ -0.04
COL12A1-202ENST00000345356 STK31Q9BXU1 1019 aa14.77□□□□□ -0.05
COL12A1-202ENST00000345356 LNPKQ9C0E8 428 aa14.77□□□□□ -0.05
COL12A1-202ENST00000345356 TPD52L1Q16890 204 aaPredicted RBP14.76□□□□□ -0.05
COL12A1-202ENST00000345356 RAPGEF2Q9Y4G8 1499 aa14.76□□□□□ -0.05
COL12A1-202ENST00000345356 CCDC18Q5T9S5 1454 aa14.76□□□□□ -0.05
COL12A1-202ENST00000345356 TSPY26PQ9H489 355 aa14.76□□□□□ -0.05
COL12A1-202ENST00000345356 PRPF40AO75400 957 aaKnown RBP14.76□□□□□ -0.05
COL12A1-202ENST00000345356 HDGFL2Q7Z4V5 671 aaPredicted RBP14.76□□□□□ -0.05
COL12A1-202ENST00000345356 ZSCAN30Q86W11 494 aa14.75□□□□□ -0.05
COL12A1-202ENST00000345356 PATL2C9JE40 543 aaKnown RBP14.75□□□□□ -0.05
COL12A1-202ENST00000345356 BICD2Q8TD16 824 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms