RNA–Protein interactions for RNA: ENST00000345093.8

RNF41-201, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 5,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-201ENST00000345093 OS9Q13438 667 aaPredicted RBP12.59□□□□□ -0.39
RNF41-201ENST00000345093 KANK4Q5T7N3 995 aaPredicted RBP12.59□□□□□ -0.39
RNF41-201ENST00000345093 CD109Q6YHK3 1445 aa12.58□□□□□ -0.39
RNF41-201ENST00000345093 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.58□□□□□ -0.4
RNF41-201ENST00000345093 G3V3G9 751 aa12.58□□□□□ -0.4
RNF41-201ENST00000345093 DCAF8Q5TAQ9 597 aa12.58□□□□□ -0.4
RNF41-201ENST00000345093 COG3Q96JB2 828 aa12.57□□□□□ -0.4
RNF41-201ENST00000345093 LAS1LQ9Y4W2 734 aaKnown RBP12.57□□□□□ -0.4
RNF41-201ENST00000345093 RALBP1Q15311 655 aa12.57□□□□□ -0.4
RNF41-201ENST00000345093 PROSER2Q86WR7 435 aaPredicted RBP12.56□□□□□ -0.4
RNF41-201ENST00000345093 C1orf141Q5JVX7 400 aa12.56□□□□□ -0.4
RNF41-201ENST00000345093 IPO8O15397 1037 aaKnown RBP12.56□□□□□ -0.4
RNF41-201ENST00000345093 ANP32BQ92688 251 aaKnown RBP12.55□□□□□ -0.4
RNF41-201ENST00000345093 SOX12O15370 315 aa12.55□□□□□ -0.4
RNF41-201ENST00000345093 RPGRIP1LQ68CZ1 1315 aa12.55□□□□□ -0.4
RNF41-201ENST00000345093 LRRC9Q6ZRR7 1453 aa12.54□□□□□ -0.4
RNF41-201ENST00000345093 TXNDC2Q86VQ3 553 aa12.54□□□□□ -0.4
RNF41-201ENST00000345093 CGNL1Q0VF96 1302 aa12.54□□□□□ -0.4
RNF41-201ENST00000345093 STK31Q9BXU1 1019 aa12.53□□□□□ -0.4
RNF41-201ENST00000345093 BIVM-ERCC5R4GMW8 1640 aa12.53□□□□□ -0.4
RNF41-201ENST00000345093 SCAPERQ9BY12 1400 aa12.52□□□□□ -0.4
RNF41-201ENST00000345093 SALL2Q9Y467 1007 aaPredicted RBP12.52□□□□□ -0.4
RNF41-201ENST00000345093 ARAP1Q96P48 1450 aa12.51□□□□□ -0.41
RNF41-201ENST00000345093 GTF2E1P29083 439 aaPredicted RBP12.51□□□□□ -0.41
RNF41-201ENST00000345093 SIN3AQ96ST3 1273 aa12.51□□□□□ -0.41
RNF41-201ENST00000345093 HFM1A2PYH4 1435 aa12.5□□□□□ -0.41
RNF41-201ENST00000345093 HSP90B1P14625 803 aaKnown RBP12.5□□□□□ -0.41
RNF41-201ENST00000345093 TNNT2P45379 298 aaPredicted RBP12.5□□□□□ -0.41
RNF41-201ENST00000345093 DENND4BO75064 1496 aaPredicted RBP12.5□□□□□ -0.41
RNF41-201ENST00000345093 ANKRD50Q9ULJ7 1429 aa12.5□□□□□ -0.41
RNF41-201ENST00000345093 WDR97A6NE52 1622 aa12.5□□□□□ -0.41
RNF41-201ENST00000345093 CC2D1BQ5T0F9 858 aaKnown RBP12.5□□□□□ -0.41
RNF41-201ENST00000345093 FGD6Q6ZV73 1430 aa12.49□□□□□ -0.41
RNF41-201ENST00000345093 WWC1Q8IX03 1113 aa12.49□□□□□ -0.41
RNF41-201ENST00000345093 TIAM1Q13009 1591 aa12.48□□□□□ -0.41
RNF41-201ENST00000345093 NCOA2Q15596 1464 aa12.48□□□□□ -0.41
RNF41-201ENST00000345093 TTC5Q8N0Z6 440 aa12.47□□□□□ -0.41
RNF41-201ENST00000345093 EPRSP07814 1512 aaKnown RBP12.47□□□□□ -0.41
RNF41-201ENST00000345093 KIF14Q15058 1648 aa12.47□□□□□ -0.41
RNF41-201ENST00000345093 TAF7LQ5H9L4 462 aa12.46□□□□□ -0.41
RNF41-201ENST00000345093 TRAK1Q9UPV9 953 aa12.46□□□□□ -0.41
RNF41-201ENST00000345093 URB2Q14146 1524 aaKnown RBP12.46□□□□□ -0.42
RNF41-201ENST00000345093 SMG6Q86US8 1419 aaKnown RBP12.46□□□□□ -0.42
RNF41-201ENST00000345093 LRPPRCP42704 1394 aaKnown RBP12.45□□□□□ -0.42
RNF41-201ENST00000345093 NCLP19338 710 aaKnown RBP12.45□□□□□ -0.42
RNF41-201ENST00000345093 ROCK1Q13464 1354 aa12.45□□□□□ -0.42
RNF41-201ENST00000345093 U2AF1L5P0DN76 240 aaPredicted RBP12.45□□□□□ -0.42
RNF41-201ENST00000345093 HSPA5P11021 654 aaKnown RBP12.45□□□□□ -0.42
RNF41-201ENST00000345093 U2AF1Q01081 240 aaKnown RBP eCLIP12.45□□□□□ -0.42
RNF41-201ENST00000345093 GPATCH3Q96I76 525 aa12.45□□□□□ -0.42
RNF41-201ENST00000345093 MSH5O43196 834 aa12.44□□□□□ -0.42
RNF41-201ENST00000345093 RAPGEF4Q8WZA2 1011 aa12.44□□□□□ -0.42
RNF41-201ENST00000345093 UNC13AQ9UPW8 1703 aa12.44□□□□□ -0.42
RNF41-201ENST00000345093 BECN1Q14457 450 aa12.44□□□□□ -0.42
RNF41-201ENST00000345093 NGEFQ8N5V2 710 aa12.44□□□□□ -0.42
RNF41-201ENST00000345093 NEUROD2Q15784 382 aa12.44□□□□□ -0.42
RNF41-201ENST00000345093 ADGRL1O94910 1474 aa12.44□□□□□ -0.42
RNF41-201ENST00000345093 C9orf84Q5VXU9 1444 aa12.43□□□□□ -0.42
RNF41-201ENST00000345093 DAPK1P53355 1430 aa12.43□□□□□ -0.42
RNF41-201ENST00000345093 CENPJQ9HC77 1338 aaPredicted RBP12.43□□□□□ -0.42
RNF41-201ENST00000345093 NUTM2DQ5VT03 806 aaPredicted RBP12.42□□□□□ -0.42
RNF41-201ENST00000345093 PDE3BQ13370 1112 aa12.42□□□□□ -0.42
RNF41-201ENST00000345093 TEFQ10587 303 aa12.41□□□□□ -0.42
RNF41-201ENST00000345093 ZNF330Q9Y3S2 320 aaPredicted RBP12.41□□□□□ -0.42
RNF41-201ENST00000345093 AFAP1Q8N556 730 aa12.41□□□□□ -0.42
RNF41-201ENST00000345093 ZNF692Q9BU19 519 aaPredicted RBP12.41□□□□□ -0.42
RNF41-201ENST00000345093 MCCP23508 829 aa12.4□□□□□ -0.42
RNF41-201ENST00000345093 CCDC141Q6ZP82 1450 aa12.4□□□□□ -0.42
RNF41-201ENST00000345093 ANKRD30BQ9BXX2 1392 aa12.4□□□□□ -0.42
RNF41-201ENST00000345093 HMMRO75330 724 aa12.4□□□□□ -0.42
RNF41-201ENST00000345093 ZRSR1Q15695 479 aaKnown RBP12.4□□□□□ -0.42
RNF41-201ENST00000345093 SUPT6HQ7KZ85 1726 aaKnown RBP12.39□□□□□ -0.43
RNF41-201ENST00000345093 GORABQ5T7V8 394 aa12.39□□□□□ -0.43
RNF41-201ENST00000345093 LRRFIP1Q32MZ4 808 aaKnown RBP12.39□□□□□ -0.43
RNF41-201ENST00000345093 TOM1O60784 492 aa12.38□□□□□ -0.43
RNF41-201ENST00000345093 FGD1P98174 961 aa12.38□□□□□ -0.43
RNF41-201ENST00000345093 MINK1Q8N4C8 1332 aaPredicted RBP12.38□□□□□ -0.43
RNF41-201ENST00000345093 KCNJ4P48050 445 aa12.38□□□□□ -0.43
RNF41-201ENST00000345093 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.38□□□□□ -0.43
RNF41-201ENST00000345093 WDR62O43379 1518 aa12.38□□□□□ -0.43
RNF41-201ENST00000345093 NOP58Q9Y2X3 529 aaKnown RBP12.38□□□□□ -0.43
RNF41-201ENST00000345093 FANCAO15360 1455 aa12.37□□□□□ -0.43
RNF41-201ENST00000345093 NLRP13Q86W25 1043 aa12.37□□□□□ -0.43
RNF41-201ENST00000345093 DDX58O95786 925 aaKnown RBP12.37□□□□□ -0.43
RNF41-201ENST00000345093 NOL10Q9BSC4 688 aaKnown RBP12.37□□□□□ -0.43
RNF41-201ENST00000345093 NEXNQ0ZGT2 675 aa12.36□□□□□ -0.43
RNF41-201ENST00000345093 ESCO1Q5FWF5 840 aa12.36□□□□□ -0.43
RNF41-201ENST00000345093 LTV1Q96GA3 475 aaPredicted RBP12.36□□□□□ -0.43
RNF41-201ENST00000345093 GOLGA6L22H0YM25 854 aa12.36□□□□□ -0.43
RNF41-201ENST00000345093 CHMP4CQ96CF2 233 aa12.35□□□□□ -0.43
RNF41-201ENST00000345093 THOC2Q8NI27 1593 aaKnown RBP12.35□□□□□ -0.43
RNF41-201ENST00000345093 CNTLNQ9NXG0 1405 aa12.35□□□□□ -0.43
RNF41-201ENST00000345093 AMOTL1Q8IY63 956 aa12.35□□□□□ -0.43
RNF41-201ENST00000345093 L3MBTL2Q969R5 705 aa12.35□□□□□ -0.43
RNF41-201ENST00000345093 HIRIP3Q9BW71 556 aaPredicted RBP12.35□□□□□ -0.43
RNF41-201ENST00000345093 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
RNF41-201ENST00000345093 RAPGEF3O95398 923 aa12.34□□□□□ -0.43
RNF41-201ENST00000345093 TCERG1O14776 1098 aaKnown RBP12.34□□□□□ -0.43
RNF41-201ENST00000345093 ZBED9Q6R2W3 1325 aa12.34□□□□□ -0.43
RNF41-201ENST00000345093 NUTM2FA1L443 756 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms