RNA–Protein interactions for RNA: ENST00000343936.4

ZC3H6-201, Transcript of zinc finger CCCH-type containing 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZC3H6, Length 11,539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6-201ENST00000343936 CCP110O43303 1012 aa11.87□□□□□ -0.51
ZC3H6-201ENST00000343936 NPHP1O15259 732 aa11.87□□□□□ -0.51
ZC3H6-201ENST00000343936 CAVIN1Q6NZI2 390 aaKnown RBP11.87□□□□□ -0.51
ZC3H6-201ENST00000343936 MYO6Q9UM54 1294 aa11.87□□□□□ -0.51
ZC3H6-201ENST00000343936 TMX4Q9H1E5 349 aaPredicted RBP11.86□□□□□ -0.51
ZC3H6-201ENST00000343936 HMGN5P82970 282 aaKnown RBP11.86□□□□□ -0.51
ZC3H6-201ENST00000343936 CAGE1Q8TC20 777 aa11.86□□□□□ -0.51
ZC3H6-201ENST00000343936 MYH10P35580 1976 aa11.85□□□□□ -0.51
ZC3H6-201ENST00000343936 DCTN1Q14203 1278 aa11.85□□□□□ -0.51
ZC3H6-201ENST00000343936 ARID3CA6NKF2 412 aa11.85□□□□□ -0.51
ZC3H6-201ENST00000343936 CPLX2Q6PUV4 134 aaKnown RBP11.85□□□□□ -0.51
ZC3H6-201ENST00000343936 NAT10Q9H0A0 1025 aaKnown RBP11.85□□□□□ -0.51
ZC3H6-201ENST00000343936 IRX6P78412 446 aaPredicted RBP11.84□□□□□ -0.51
ZC3H6-201ENST00000343936 EFCAB5A4FU69 1503 aa11.84□□□□□ -0.51
ZC3H6-201ENST00000343936 RUFY2Q8WXA3 655 aa11.84□□□□□ -0.51
ZC3H6-201ENST00000343936 CCDC66A2RUB6 948 aa11.84□□□□□ -0.51
ZC3H6-201ENST00000343936 KIF21AQ7Z4S6 1674 aa11.83□□□□□ -0.52
ZC3H6-201ENST00000343936 TXLNBQ8N3L3 684 aa11.83□□□□□ -0.52
ZC3H6-201ENST00000343936 CENPJQ9HC77 1338 aaPredicted RBP11.83□□□□□ -0.52
ZC3H6-201ENST00000343936 CNTLNQ9NXG0 1405 aa11.83□□□□□ -0.52
ZC3H6-201ENST00000343936 DIAPH3Q9NSV4 1193 aa11.83□□□□□ -0.52
ZC3H6-201ENST00000343936 FAM161AQ3B820 660 aa11.83□□□□□ -0.52
ZC3H6-201ENST00000343936 LETM1O95202 739 aaPredicted RBP11.82□□□□□ -0.52
ZC3H6-201ENST00000343936 MIA2Q96PC5 1412 aa11.82□□□□□ -0.52
ZC3H6-201ENST00000343936 RAPGEF2Q9Y4G8 1499 aa11.82□□□□□ -0.52
ZC3H6-201ENST00000343936 CCDC144AA2RUR9 1427 aa11.82□□□□□ -0.52
ZC3H6-201ENST00000343936 GSE1Q14687 1217 aa11.82□□□□□ -0.52
ZC3H6-201ENST00000343936 AK7Q96M32 723 aa11.82□□□□□ -0.52
ZC3H6-201ENST00000343936 NAP1L2Q9ULW6 460 aaPredicted RBP11.82□□□□□ -0.52
ZC3H6-201ENST00000343936 MYBBP1AQ9BQG0 1328 aaKnown RBP11.81□□□□□ -0.52
ZC3H6-201ENST00000343936 NUCB2P80303 420 aa11.81□□□□□ -0.52
ZC3H6-201ENST00000343936 B4GALNT3Q6L9W6 998 aa11.81□□□□□ -0.52
ZC3H6-201ENST00000343936 RAB3GAP2Q9H2M9 1393 aa11.81□□□□□ -0.52
ZC3H6-201ENST00000343936 SETD1BQ9UPS6 1966 aaKnown RBP11.81□□□□□ -0.52
ZC3H6-201ENST00000343936 U2SURPO15042 1029 aaKnown RBP11.81□□□□□ -0.52
ZC3H6-201ENST00000343936 ERCC4Q92889 916 aaPredicted RBP11.81□□□□□ -0.52
ZC3H6-201ENST00000343936 AEBP2Q6ZN18 517 aaPredicted RBP11.8□□□□□ -0.52
ZC3H6-201ENST00000343936 MCM2P49736 904 aa11.8□□□□□ -0.52
ZC3H6-201ENST00000343936 PLEKHH2Q8IVE3 1493 aa11.8□□□□□ -0.52
ZC3H6-201ENST00000343936 E9PSI1 815 aa11.8□□□□□ -0.52
ZC3H6-201ENST00000343936 DCAF11Q8TEB1 546 aa11.8□□□□□ -0.52
ZC3H6-201ENST00000343936 CCDC7Q96M83 1385 aa11.8□□□□□ -0.52
ZC3H6-201ENST00000343936 CUL7Q14999 1698 aa11.8□□□□□ -0.52
ZC3H6-201ENST00000343936 RNF20Q5VTR2 975 aa11.79□□□□□ -0.52
ZC3H6-201ENST00000343936 HSP90B2PQ58FF3 399 aa11.79□□□□□ -0.52
ZC3H6-201ENST00000343936 PDCP20941 246 aa11.79□□□□□ -0.52
ZC3H6-201ENST00000343936 ITSN2Q9NZM3 1697 aa11.79□□□□□ -0.52
ZC3H6-201ENST00000343936 HECW1Q76N89 1606 aa11.79□□□□□ -0.52
ZC3H6-201ENST00000343936 CCDC47Q96A33 483 aaKnown RBP11.79□□□□□ -0.52
ZC3H6-201ENST00000343936 WASHC2AQ641Q2 1341 aa11.78□□□□□ -0.52
ZC3H6-201ENST00000343936 WASHC2CQ9Y4E1 1318 aa11.78□□□□□ -0.52
ZC3H6-201ENST00000343936 ITPRIPQ8IWB1 547 aa11.77□□□□□ -0.52
ZC3H6-201ENST00000343936 BECN2A8MW95 431 aa11.77□□□□□ -0.52
ZC3H6-201ENST00000343936 ZKSCAN1P17029 563 aaPredicted RBP11.77□□□□□ -0.52
ZC3H6-201ENST00000343936 RRP12Q5JTH9 1297 aaKnown RBP11.77□□□□□ -0.53
ZC3H6-201ENST00000343936 SRPK2P78362 688 aaKnown RBP11.76□□□□□ -0.53
ZC3H6-201ENST00000343936 RGL3Q3MIN7 710 aa11.76□□□□□ -0.53
ZC3H6-201ENST00000343936 MBD3O95983 291 aa11.76□□□□□ -0.53
ZC3H6-201ENST00000343936 DDX19BQ9UMR2 479 aa11.76□□□□□ -0.53
ZC3H6-201ENST00000343936 CCDC88BA6NC98 1476 aa11.75□□□□□ -0.53
ZC3H6-201ENST00000343936 SMC4Q9NTJ3 1288 aa11.75□□□□□ -0.53
ZC3H6-201ENST00000343936 HSP90B1P14625 803 aaKnown RBP11.75□□□□□ -0.53
ZC3H6-201ENST00000343936 HMGB2P26583 209 aaKnown RBP11.75□□□□□ -0.53
ZC3H6-201ENST00000343936 RRBP1Q9P2E9 1410 aaKnown RBP11.75□□□□□ -0.53
ZC3H6-201ENST00000343936 CCDC173Q0VFZ6 552 aa11.75□□□□□ -0.53
ZC3H6-201ENST00000343936 CCDC191Q8NCU4 936 aa11.74□□□□□ -0.53
ZC3H6-201ENST00000343936 NUP155O75694 1391 aa11.74□□□□□ -0.53
ZC3H6-201ENST00000343936 SF3A1Q15459 793 aaKnown RBP11.74□□□□□ -0.53
ZC3H6-201ENST00000343936 RUFY1Q96T51 708 aa11.74□□□□□ -0.53
ZC3H6-201ENST00000343936 PIP4K2AP48426 406 aaPredicted RBP11.74□□□□□ -0.53
ZC3H6-201ENST00000343936 H3BQV1 296 aa11.74□□□□□ -0.53
ZC3H6-201ENST00000343936 USP8P40818 1118 aa11.74□□□□□ -0.53
ZC3H6-201ENST00000343936 IFFO2Q5TF58 517 aa11.74□□□□□ -0.53
ZC3H6-201ENST00000343936 FYCO1Q9BQS8 1478 aa11.74□□□□□ -0.53
ZC3H6-201ENST00000343936 LUC7LQ9NQ29 371 aaKnown RBP11.73□□□□□ -0.53
ZC3H6-201ENST00000343936 GORABQ5T7V8 394 aa11.73□□□□□ -0.53
ZC3H6-201ENST00000343936 ZRSR2Q15696 482 aaKnown RBP11.73□□□□□ -0.53
ZC3H6-201ENST00000343936 AMOTL1Q8IY63 956 aa11.73□□□□□ -0.53
ZC3H6-201ENST00000343936 CACNA1FO60840 1977 aa11.73□□□□□ -0.53
ZC3H6-201ENST00000343936 TPD52L1Q16890 204 aaPredicted RBP11.73□□□□□ -0.53
ZC3H6-201ENST00000343936 HSP90AB4PQ58FF6 505 aa11.73□□□□□ -0.53
ZC3H6-201ENST00000343936 AKAP17AQ02040 695 aaKnown RBP11.72□□□□□ -0.53
ZC3H6-201ENST00000343936 RASSF8Q8NHQ8 419 aa11.72□□□□□ -0.53
ZC3H6-201ENST00000343936 CC2D1BQ5T0F9 858 aaKnown RBP11.72□□□□□ -0.53
ZC3H6-201ENST00000343936 CT47B1P0C2W7 299 aaPredicted RBP11.72□□□□□ -0.53
ZC3H6-201ENST00000343936 MYOM3Q5VTT5 1437 aa11.72□□□□□ -0.53
ZC3H6-201ENST00000343936 PKNOX2Q96KN3 472 aa11.72□□□□□ -0.53
ZC3H6-201ENST00000343936 NEUROD2Q15784 382 aa11.71□□□□□ -0.53
ZC3H6-201ENST00000343936 MFAP1P55081 439 aaKnown RBP11.71□□□□□ -0.54
ZC3H6-201ENST00000343936 IQCEQ6IPM2 695 aa11.71□□□□□ -0.54
ZC3H6-201ENST00000343936 U2AF1L5P0DN76 240 aaPredicted RBP11.71□□□□□ -0.54
ZC3H6-201ENST00000343936 U2AF1Q01081 240 aaKnown RBP eCLIP11.71□□□□□ -0.54
ZC3H6-201ENST00000343936 TRIM6-TRIM34B2RNG4 842 aa11.7□□□□□ -0.54
ZC3H6-201ENST00000343936 CLSTN1O94985 981 aa11.7□□□□□ -0.54
ZC3H6-201ENST00000343936 TSPYL1Q9H0U9 437 aa11.7□□□□□ -0.54
ZC3H6-201ENST00000343936 GOLGA6L7A0A1B0GV03 622 aa11.7□□□□□ -0.54
ZC3H6-201ENST00000343936 FAM43AQ8N2R8 423 aa11.7□□□□□ -0.54
ZC3H6-201ENST00000343936 CCDC39Q9UFE4 941 aa11.7□□□□□ -0.54
ZC3H6-201ENST00000343936 EFCAB2Q5VUJ9 269 aa11.7□□□□□ -0.54
ZC3H6-201ENST00000343936 SYNE3Q6ZMZ3 975 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms