RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 MYO5CQ9NQX4 1742 aa20.4■□□□□ 0.86
VIPAS39-202ENST00000343765 ROCK2O75116 1388 aaKnown RBP20.4■□□□□ 0.86
VIPAS39-202ENST00000343765 SENP3-EIF4A1A0A087X0R7 540 aa20.37■□□□□ 0.85
VIPAS39-202ENST00000343765 MAST1Q9Y2H9 1570 aa20.36■□□□□ 0.85
VIPAS39-202ENST00000343765 ZCCHC11Q5TAX3 1644 aaKnown RBP20.36■□□□□ 0.85
VIPAS39-202ENST00000343765 EFCAB2Q5VUJ9 269 aa20.35■□□□□ 0.85
VIPAS39-202ENST00000343765 PLA2R1Q13018 1463 aa20.34■□□□□ 0.85
VIPAS39-202ENST00000343765 ARID4BQ4LE39 1312 aaPredicted RBP20.34■□□□□ 0.85
VIPAS39-202ENST00000343765 PLCH2O75038 1416 aa20.34■□□□□ 0.85
VIPAS39-202ENST00000343765 ZBED9Q6R2W3 1325 aa20.34■□□□□ 0.85
VIPAS39-202ENST00000343765 CLASP1Q7Z460 1538 aa20.34■□□□□ 0.85
VIPAS39-202ENST00000343765 UNC13BO14795 1591 aa20.33■□□□□ 0.85
VIPAS39-202ENST00000343765 NBPF1Q3BBV0 1214 aa20.33■□□□□ 0.85
VIPAS39-202ENST00000343765 PLXNC1O60486 1568 aa20.32■□□□□ 0.84
VIPAS39-202ENST00000343765 PRAG1Q86YV5 1406 aa20.31■□□□□ 0.84
VIPAS39-202ENST00000343765 TRAPPC8Q9Y2L5 1435 aa20.31■□□□□ 0.84
VIPAS39-202ENST00000343765 DUOX2Q9NRD8 1548 aa20.3■□□□□ 0.84
VIPAS39-202ENST00000343765 AFAP1Q8N556 730 aa20.29■□□□□ 0.84
VIPAS39-202ENST00000343765 A2MP01023 1474 aa20.28■□□□□ 0.84
VIPAS39-202ENST00000343765 UHRF1BP1LA0JNW5 1464 aa20.27■□□□□ 0.84
VIPAS39-202ENST00000343765 IQGAP3Q86VI3 1631 aa20.27■□□□□ 0.84
VIPAS39-202ENST00000343765 TMC1Q8TDI8 760 aa20.27■□□□□ 0.83
VIPAS39-202ENST00000343765 ABCC1P33527 1531 aa20.26■□□□□ 0.83
VIPAS39-202ENST00000343765 ERBINQ96RT1 1412 aa20.26■□□□□ 0.83
VIPAS39-202ENST00000343765 SPAG9O60271 1321 aaKnown RBP20.26■□□□□ 0.83
VIPAS39-202ENST00000343765 TRPM1Q7Z4N2 1603 aa20.24■□□□□ 0.83
VIPAS39-202ENST00000343765 MYT1LQ9UL68 1186 aa20.23■□□□□ 0.83
VIPAS39-202ENST00000343765 MAGI2Q86UL8 1455 aa20.2■□□□□ 0.82
VIPAS39-202ENST00000343765 PNISRQ8TF01 805 aaKnown RBP20.2■□□□□ 0.82
VIPAS39-202ENST00000343765 MYBBP1AQ9BQG0 1328 aaKnown RBP20.17■□□□□ 0.82
VIPAS39-202ENST00000343765 GPRASP1Q5JY77 1395 aa20.16■□□□□ 0.82
VIPAS39-202ENST00000343765 DISP3Q9P2K9 1392 aa20.16■□□□□ 0.82
VIPAS39-202ENST00000343765 RBM19Q9Y4C8 960 aaKnown RBP20.16■□□□□ 0.82
VIPAS39-202ENST00000343765 WDR7Q9Y4E6 1490 aa20.15■□□□□ 0.82
VIPAS39-202ENST00000343765 RALBP1Q15311 655 aa20.15■□□□□ 0.82
VIPAS39-202ENST00000343765 ZFYVE16Q7Z3T8 1539 aa20.14■□□□□ 0.82
VIPAS39-202ENST00000343765 TESK2Q96S53 571 aa20.14■□□□□ 0.82
VIPAS39-202ENST00000343765 PPP4R2Q9NY27 417 aa20.14■□□□□ 0.82
VIPAS39-202ENST00000343765 ATP10AO60312 1499 aa20.14■□□□□ 0.81
VIPAS39-202ENST00000343765 FANCAO15360 1455 aa20.13■□□□□ 0.81
VIPAS39-202ENST00000343765 E9PCH4 1651 aa20.13■□□□□ 0.81
VIPAS39-202ENST00000343765 B4GALNT3Q6L9W6 998 aa20.12■□□□□ 0.81
VIPAS39-202ENST00000343765 PRDM15P57071 1507 aaPredicted RBP20.12■□□□□ 0.81
VIPAS39-202ENST00000343765 KTN1Q86UP2 1357 aaKnown RBP20.12■□□□□ 0.81
VIPAS39-202ENST00000343765 CC2D1BQ5T0F9 858 aaKnown RBP20.12■□□□□ 0.81
VIPAS39-202ENST00000343765 NUDCQ9Y266 331 aa20.12■□□□□ 0.81
VIPAS39-202ENST00000343765 BRD4O60885 1362 aaPredicted RBP20.11■□□□□ 0.81
VIPAS39-202ENST00000343765 SMG6Q86US8 1419 aaKnown RBP20.11■□□□□ 0.81
VIPAS39-202ENST00000343765 COL17A1Q9UMD9 1497 aaPredicted RBP20.11■□□□□ 0.81
VIPAS39-202ENST00000343765 KIF3BO15066 747 aa20.11■□□□□ 0.81
VIPAS39-202ENST00000343765 RTEL1-TNFRSF6BF6WH68 1400 aa20.1■□□□□ 0.81
VIPAS39-202ENST00000343765 ERICH6BQ5W0A0 696 aa20.1■□□□□ 0.81
VIPAS39-202ENST00000343765 SALL2Q9Y467 1007 aaPredicted RBP20.1■□□□□ 0.81
VIPAS39-202ENST00000343765 EIF2AK4Q9P2K8 1649 aaKnown RBP20.1■□□□□ 0.81
VIPAS39-202ENST00000343765 SCAPERQ9BY12 1400 aa20.09■□□□□ 0.81
VIPAS39-202ENST00000343765 TMF1P82094 1093 aa20.09■□□□□ 0.81
VIPAS39-202ENST00000343765 PANK3Q9H999 370 aa20.09■□□□□ 0.81
VIPAS39-202ENST00000343765 PER1O15534 1290 aaPredicted RBP20.07■□□□□ 0.8
VIPAS39-202ENST00000343765 ARAP3Q8WWN8 1544 aa20.07■□□□□ 0.8
VIPAS39-202ENST00000343765 NLRP13Q86W25 1043 aa20.07■□□□□ 0.8
VIPAS39-202ENST00000343765 ADGRL1O94910 1474 aa20.07■□□□□ 0.8
VIPAS39-202ENST00000343765 ATP7AQ04656 1500 aa20.07■□□□□ 0.8
VIPAS39-202ENST00000343765 LRPPRCP42704 1394 aaKnown RBP20.06■□□□□ 0.8
VIPAS39-202ENST00000343765 PARD3Q8TEW0 1356 aa20.06■□□□□ 0.8
VIPAS39-202ENST00000343765 LAMC1P11047 1609 aa20.05■□□□□ 0.8
VIPAS39-202ENST00000343765 ASXL2Q76L83 1435 aa20.05■□□□□ 0.8
VIPAS39-202ENST00000343765 KANK1Q14678 1352 aa20.05■□□□□ 0.8
VIPAS39-202ENST00000343765 ABCA9Q8IUA7 1624 aa20.03■□□□□ 0.8
VIPAS39-202ENST00000343765 TRPM2O94759 1503 aa20.03■□□□□ 0.8
VIPAS39-202ENST00000343765 CLTCL1P53675 1640 aa20.02■□□□□ 0.8
VIPAS39-202ENST00000343765 INO80Q9ULG1 1556 aaPredicted RBP20.01■□□□□ 0.79
VIPAS39-202ENST00000343765 MADDQ8WXG6 1647 aa20.01■□□□□ 0.79
VIPAS39-202ENST00000343765 SPHKAPQ2M3C7 1700 aa20■□□□□ 0.79
VIPAS39-202ENST00000343765 RNF17Q9BXT8 1623 aaKnown RBP20■□□□□ 0.79
VIPAS39-202ENST00000343765 PTPRTO14522 1441 aa20■□□□□ 0.79
VIPAS39-202ENST00000343765 DEPDC5O75140 1603 aa19.99■□□□□ 0.79
VIPAS39-202ENST00000343765 TET3O43151 1660 aa19.97■□□□□ 0.79
VIPAS39-202ENST00000343765 NPM1P06748 294 aaKnown RBP eCLIP19.97■□□□□ 0.79
VIPAS39-202ENST00000343765 UGGT1Q9NYU2 1555 aa19.97■□□□□ 0.79
VIPAS39-202ENST00000343765 CEP152O94986 1710 aa19.96■□□□□ 0.79
VIPAS39-202ENST00000343765 RNF123Q5XPI4 1314 aa19.94■□□□□ 0.78
VIPAS39-202ENST00000343765 WASHC2CQ9Y4E1 1318 aa19.94■□□□□ 0.78
VIPAS39-202ENST00000343765 SCAF11Q99590 1463 aaKnown RBP19.93■□□□□ 0.78
VIPAS39-202ENST00000343765 MYT1Q01538 1121 aa19.93■□□□□ 0.78
VIPAS39-202ENST00000343765 KNSTRNQ9Y448 316 aa19.93■□□□□ 0.78
VIPAS39-202ENST00000343765 VWDEQ8N2E2 1590 aa19.93■□□□□ 0.78
VIPAS39-202ENST00000343765 CFAP70Q5T0N1 1121 aa19.92■□□□□ 0.78
VIPAS39-202ENST00000343765 CHGAP10645 457 aaKnown RBP19.91■□□□□ 0.78
VIPAS39-202ENST00000343765 OSCARQ8IYS5 282 aa19.91■□□□□ 0.78
VIPAS39-202ENST00000343765 CCDC136Q96JN2 1154 aa19.91■□□□□ 0.78
VIPAS39-202ENST00000343765 IQGAP1P46940 1657 aa19.91■□□□□ 0.78
VIPAS39-202ENST00000343765 MROH1Q8NDA8 1641 aa19.91■□□□□ 0.78
VIPAS39-202ENST00000343765 ADGRF5Q8IZF2 1346 aa19.9■□□□□ 0.78
VIPAS39-202ENST00000343765 CDCA7LQ96GN5 454 aa19.89■□□□□ 0.78
VIPAS39-202ENST00000343765 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.78
VIPAS39-202ENST00000343765 ANP32EQ9BTT0 268 aa19.89■□□□□ 0.77
VIPAS39-202ENST00000343765 KIDINS220Q9ULH0 1771 aa19.88■□□□□ 0.77
VIPAS39-202ENST00000343765 GGT6Q6P531 493 aa19.88■□□□□ 0.77
VIPAS39-202ENST00000343765 STAC3Q96MF2 364 aa19.88■□□□□ 0.77
VIPAS39-202ENST00000343765 ZNF518AQ6AHZ1 1483 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms