RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TOMM22Q9NS69 142 aa18.79■□□□□ 0.6
UBE3B-202ENST00000342494 VGFO15240 615 aaPredicted RBP18.79■□□□□ 0.6
UBE3B-202ENST00000342494 CLUAP1Q96AJ1 413 aa18.79■□□□□ 0.6
UBE3B-202ENST00000342494 C1orf141Q5JVX7 400 aa18.78■□□□□ 0.6
UBE3B-202ENST00000342494 COG3Q96JB2 828 aa18.77■□□□□ 0.6
UBE3B-202ENST00000342494 PTPRGP23470 1445 aa18.77■□□□□ 0.59
UBE3B-202ENST00000342494 CCDC34Q96HJ3 373 aa18.77■□□□□ 0.59
UBE3B-202ENST00000342494 NLRP13Q86W25 1043 aa18.76■□□□□ 0.59
UBE3B-202ENST00000342494 RASSF8Q8NHQ8 419 aa18.75■□□□□ 0.59
UBE3B-202ENST00000342494 GBP4Q96PP9 640 aa18.75■□□□□ 0.59
UBE3B-202ENST00000342494 MSNP26038 577 aaKnown RBP18.75■□□□□ 0.59
UBE3B-202ENST00000342494 CENPJQ9HC77 1338 aaPredicted RBP18.75■□□□□ 0.59
UBE3B-202ENST00000342494 CCDC144AA2RUR9 1427 aa18.74■□□□□ 0.59
UBE3B-202ENST00000342494 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
UBE3B-202ENST00000342494 MEX3CQ5U5Q3 659 aaKnown RBP18.73■□□□□ 0.59
UBE3B-202ENST00000342494 MFAP1P55081 439 aaKnown RBP18.72■□□□□ 0.59
UBE3B-202ENST00000342494 TEFQ10587 303 aa18.72■□□□□ 0.59
UBE3B-202ENST00000342494 EVC2Q86UK5 1308 aa18.71■□□□□ 0.59
UBE3B-202ENST00000342494 TTC5Q8N0Z6 440 aa18.7■□□□□ 0.58
UBE3B-202ENST00000342494 VPS53Q5VIR6 699 aa18.7■□□□□ 0.58
UBE3B-202ENST00000342494 MARCH6O60337 910 aa18.69■□□□□ 0.58
UBE3B-202ENST00000342494 PTMSP20962 102 aa18.69■□□□□ 0.58
UBE3B-202ENST00000342494 MINK1Q8N4C8 1332 aaPredicted RBP18.69■□□□□ 0.58
UBE3B-202ENST00000342494 RRP7AQ9Y3A4 280 aaKnown RBP18.69■□□□□ 0.58
UBE3B-202ENST00000342494 TPM4P67936 248 aa18.68■□□□□ 0.58
UBE3B-202ENST00000342494 CGNL1Q0VF96 1302 aa18.68■□□□□ 0.58
UBE3B-202ENST00000342494 ELL2O00472 640 aaPredicted RBP18.67■□□□□ 0.58
UBE3B-202ENST00000342494 SYAP1Q96A49 352 aaPredicted RBP18.67■□□□□ 0.58
UBE3B-202ENST00000342494 SLKQ9H2G2 1235 aaPredicted RBP18.67■□□□□ 0.58
UBE3B-202ENST00000342494 RTN4Q9NQC3 1192 aaKnown RBP18.67■□□□□ 0.58
UBE3B-202ENST00000342494 ST20-MTHFSA0A0A6YYL1 179 aa18.67■□□□□ 0.58
UBE3B-202ENST00000342494 NOL8Q76FK4 1167 aaKnown RBP18.67■□□□□ 0.58
UBE3B-202ENST00000342494 PSME1Q06323 249 aa18.66■□□□□ 0.58
UBE3B-202ENST00000342494 FAM69CQ0P6D2 419 aa18.66■□□□□ 0.58
UBE3B-202ENST00000342494 PANK3Q9H999 370 aa18.66■□□□□ 0.58
UBE3B-202ENST00000342494 PHLDB1Q86UU1 1377 aa18.66■□□□□ 0.58
UBE3B-202ENST00000342494 SYTL4Q96C24 671 aaPredicted RBP18.66■□□□□ 0.58
UBE3B-202ENST00000342494 AMER1Q5JTC6 1135 aaPredicted RBP18.66■□□□□ 0.58
UBE3B-202ENST00000342494 TCERG1O14776 1098 aaKnown RBP18.65■□□□□ 0.58
UBE3B-202ENST00000342494 NGEFQ8N5V2 710 aa18.65■□□□□ 0.58
UBE3B-202ENST00000342494 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.65■□□□□ 0.58
UBE3B-202ENST00000342494 PDE3BQ13370 1112 aa18.65■□□□□ 0.58
UBE3B-202ENST00000342494 NEXNQ0ZGT2 675 aa18.64■□□□□ 0.57
UBE3B-202ENST00000342494 NOC3LQ8WTT2 800 aaKnown RBP18.64■□□□□ 0.57
UBE3B-202ENST00000342494 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.57
UBE3B-202ENST00000342494 KIF3AQ9Y496 699 aa18.63■□□□□ 0.57
UBE3B-202ENST00000342494 PRM3Q9NNZ6 103 aa18.63■□□□□ 0.57
UBE3B-202ENST00000342494 KIF15Q9NS87 1388 aa18.62■□□□□ 0.57
UBE3B-202ENST00000342494 KIF16BQ96L93 1317 aa18.61■□□□□ 0.57
UBE3B-202ENST00000342494 CSPP1Q1MSJ5 1256 aa18.61■□□□□ 0.57
UBE3B-202ENST00000342494 FANCD2Q9BXW9 1451 aa18.61■□□□□ 0.57
UBE3B-202ENST00000342494 CREBRFQ8IUR6 639 aa18.61■□□□□ 0.57
UBE3B-202ENST00000342494 EIF2S2P20042 333 aaKnown RBP18.61■□□□□ 0.57
UBE3B-202ENST00000342494 NOL10Q9BSC4 688 aaKnown RBP18.61■□□□□ 0.57
UBE3B-202ENST00000342494 GZF1Q9H116 711 aaPredicted RBP18.6■□□□□ 0.57
UBE3B-202ENST00000342494 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.6■□□□□ 0.57
UBE3B-202ENST00000342494 TRIM34Q9BYJ4 488 aa18.59■□□□□ 0.57
UBE3B-202ENST00000342494 MYBBP1AQ9BQG0 1328 aaKnown RBP18.59■□□□□ 0.57
UBE3B-202ENST00000342494 ATF3P18847 181 aa18.59■□□□□ 0.57
UBE3B-202ENST00000342494 SF3A1Q15459 793 aaKnown RBP18.58■□□□□ 0.57
UBE3B-202ENST00000342494 RILPL2Q969X0 211 aa18.58■□□□□ 0.56
UBE3B-202ENST00000342494 ST18O60284 1047 aa18.58■□□□□ 0.56
UBE3B-202ENST00000342494 AMOTL1Q8IY63 956 aa18.58■□□□□ 0.56
UBE3B-202ENST00000342494 C9orf78Q9NZ63 289 aaPredicted RBP18.57■□□□□ 0.56
UBE3B-202ENST00000342494 PDE4CQ08493 712 aa18.57■□□□□ 0.56
UBE3B-202ENST00000342494 AKAP17AQ02040 695 aaKnown RBP18.57■□□□□ 0.56
UBE3B-202ENST00000342494 BCL2L13Q9BXK5 485 aa18.56■□□□□ 0.56
UBE3B-202ENST00000342494 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
UBE3B-202ENST00000342494 LRRFIP1Q32MZ4 808 aaKnown RBP18.56■□□□□ 0.56
UBE3B-202ENST00000342494 RAD21O60216 631 aa18.56■□□□□ 0.56
UBE3B-202ENST00000342494 FOXD4L1Q9NU39 408 aa18.56■□□□□ 0.56
UBE3B-202ENST00000342494 CTDP1Q9Y5B0 961 aaPredicted RBP18.55■□□□□ 0.56
UBE3B-202ENST00000342494 CEP89Q96ST8 783 aa18.54■□□□□ 0.56
UBE3B-202ENST00000342494 KLHL34Q8N239 644 aa18.54■□□□□ 0.56
UBE3B-202ENST00000342494 DIAPH1O60610 1272 aaKnown RBP18.54■□□□□ 0.56
UBE3B-202ENST00000342494 VPS37DQ86XT2 251 aa18.54■□□□□ 0.56
UBE3B-202ENST00000342494 WIZO95785 1651 aa18.53■□□□□ 0.56
UBE3B-202ENST00000342494 SYNE3Q6ZMZ3 975 aa18.53■□□□□ 0.56
UBE3B-202ENST00000342494 ZKSCAN2Q63HK3 967 aa18.53■□□□□ 0.56
UBE3B-202ENST00000342494 DDX58O95786 925 aaKnown RBP18.52■□□□□ 0.56
UBE3B-202ENST00000342494 ANKRD45Q5TZF3 282 aa18.52■□□□□ 0.56
UBE3B-202ENST00000342494 CHMP4CQ96CF2 233 aa18.52■□□□□ 0.56
UBE3B-202ENST00000342494 H3BQV1 296 aa18.52■□□□□ 0.56
UBE3B-202ENST00000342494 IFFO2Q5TF58 517 aa18.52■□□□□ 0.56
UBE3B-202ENST00000342494 PHF23Q9BUL5 403 aaPredicted RBP18.52■□□□□ 0.56
UBE3B-202ENST00000342494 RAPGEF4Q8WZA2 1011 aa18.52■□□□□ 0.55
UBE3B-202ENST00000342494 FBXW7Q969H0 707 aa18.52■□□□□ 0.55
UBE3B-202ENST00000342494 NECTIN2Q92692 538 aa18.51■□□□□ 0.55
UBE3B-202ENST00000342494 RBM19Q9Y4C8 960 aaKnown RBP18.51■□□□□ 0.55
UBE3B-202ENST00000342494 E9PSI1 815 aa18.51■□□□□ 0.55
UBE3B-202ENST00000342494 FAM184AQ8NB25 1140 aa18.51■□□□□ 0.55
UBE3B-202ENST00000342494 TCEAL9Q9UHQ7 104 aa18.51■□□□□ 0.55
UBE3B-202ENST00000342494 DIAPH3Q9NSV4 1193 aa18.5■□□□□ 0.55
UBE3B-202ENST00000342494 PES1O00541 588 aaKnown RBP18.48■□□□□ 0.55
UBE3B-202ENST00000342494 FOXD4L5Q5VV16 416 aaPredicted RBP18.48■□□□□ 0.55
UBE3B-202ENST00000342494 FOXD4L4Q8WXT5 416 aaPredicted RBP18.48■□□□□ 0.55
UBE3B-202ENST00000342494 CPLX2Q6PUV4 134 aaKnown RBP18.48■□□□□ 0.55
UBE3B-202ENST00000342494 APPP05067 770 aa18.47■□□□□ 0.55
UBE3B-202ENST00000342494 NLRP2Q9NX02 1062 aa18.47■□□□□ 0.55
UBE3B-202ENST00000342494 USP47Q96K76 1375 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms