RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 RALBP1Q15311 655 aa27.78■■■□□ 2.04
CLPB-202ENST00000340729 MYBBP1AQ9BQG0 1328 aaKnown RBP27.77■■■□□ 2.04
CLPB-202ENST00000340729 PLEKHD1A6NEE1 506 aa27.75■■■□□ 2.03
CLPB-202ENST00000340729 ZNF326Q5BKZ1 582 aaKnown RBP27.71■■■□□ 2.03
CLPB-202ENST00000340729 CARD11Q9BXL7 1154 aa27.71■■■□□ 2.03
CLPB-202ENST00000340729 POLR3GLQ9BT43 218 aa27.71■■■□□ 2.03
CLPB-202ENST00000340729 ZNF777Q9ULD5 760 aaPredicted RBP27.69■■■□□ 2.02
CLPB-202ENST00000340729 RRP1P56182 461 aaKnown RBP27.68■■■□□ 2.02
CLPB-202ENST00000340729 ZBTB47Q9UFB7 747 aaPredicted RBP27.68■■■□□ 2.02
CLPB-202ENST00000340729 ABCC2Q92887 1545 aa27.67■■■□□ 2.02
CLPB-202ENST00000340729 CDC42BPBQ9Y5S2 1711 aa27.67■■■□□ 2.02
CLPB-202ENST00000340729 PDE3BQ13370 1112 aa27.66■■■□□ 2.02
CLPB-202ENST00000340729 NUP155O75694 1391 aa27.66■■■□□ 2.02
CLPB-202ENST00000340729 C9orf84Q5VXU9 1444 aa27.66■■■□□ 2.02
CLPB-202ENST00000340729 INSRP06213 1382 aa27.66■■■□□ 2.02
CLPB-202ENST00000340729 PREX2Q70Z35 1606 aa27.65■■■□□ 2.02
CLPB-202ENST00000340729 ZMYM4Q5VZL5 1548 aa27.65■■■□□ 2.02
CLPB-202ENST00000340729 TCERG1O14776 1098 aaKnown RBP27.64■■■□□ 2.02
CLPB-202ENST00000340729 NBR1Q14596 966 aa27.63■■■□□ 2.01
CLPB-202ENST00000340729 PARD3Q8TEW0 1356 aa27.62■■■□□ 2.01
CLPB-202ENST00000340729 ST20-MTHFSA0A0A6YYL1 179 aa27.62■■■□□ 2.01
CLPB-202ENST00000340729 TTC37Q6PGP7 1564 aa27.61■■■□□ 2.01
CLPB-202ENST00000340729 ARHGEF5Q12774 1597 aa27.6■■■□□ 2.01
CLPB-202ENST00000340729 CNGB1Q14028 1251 aaPredicted RBP27.6■■■□□ 2.01
CLPB-202ENST00000340729 NLRP13Q86W25 1043 aa27.6■■■□□ 2.01
CLPB-202ENST00000340729 RCAN3Q9UKA8 241 aa27.59■■■□□ 2.01
CLPB-202ENST00000340729 SAMD9LQ8IVG5 1584 aa27.58■■■□□ 2.01
CLPB-202ENST00000340729 MS4A1P11836 297 aa27.58■■■□□ 2.01
CLPB-202ENST00000340729 TRPM1Q7Z4N2 1603 aa27.58■■■□□ 2.01
CLPB-202ENST00000340729 RTL5Q5HYW3 569 aaPredicted RBP27.56■■■□□ 2
CLPB-202ENST00000340729 ZCCHC11Q5TAX3 1644 aaKnown RBP27.56■■■□□ 2
CLPB-202ENST00000340729 LAMC1P11047 1609 aa27.55■■■□□ 2
CLPB-202ENST00000340729 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.54■■■□□ 2
CLPB-202ENST00000340729 WASHC2CQ9Y4E1 1318 aa27.54■■■□□ 2
CLPB-202ENST00000340729 EXOC6Q8TAG9 804 aa27.53■■■□□ 2
CLPB-202ENST00000340729 PRAG1Q86YV5 1406 aa27.52■■■□□ 2
CLPB-202ENST00000340729 MYO5CQ9NQX4 1742 aa27.51■■□□□ 1.99
CLPB-202ENST00000340729 GPRASP1Q5JY77 1395 aa27.51■■□□□ 1.99
CLPB-202ENST00000340729 DCAF11Q8TEB1 546 aa27.5■■□□□ 1.99
CLPB-202ENST00000340729 TSPY4P0CV99 314 aa27.48■■□□□ 1.99
CLPB-202ENST00000340729 TSPY10P0CW01 314 aa27.48■■□□□ 1.99
CLPB-202ENST00000340729 BLMP54132 1417 aaPredicted RBP27.48■■□□□ 1.99
CLPB-202ENST00000340729 FAM135AQ9P2D6 1515 aa27.48■■□□□ 1.99
CLPB-202ENST00000340729 PLEKHH2Q8IVE3 1493 aa27.48■■□□□ 1.99
CLPB-202ENST00000340729 PDE4AP27815 886 aa27.47■■□□□ 1.99
CLPB-202ENST00000340729 BACH2Q9BYV9 841 aa27.47■■□□□ 1.99
CLPB-202ENST00000340729 PER1O15534 1290 aaPredicted RBP27.47■■□□□ 1.99
CLPB-202ENST00000340729 UHRF1BP1LA0JNW5 1464 aa27.47■■□□□ 1.99
CLPB-202ENST00000340729 COL17A1Q9UMD9 1497 aaPredicted RBP27.47■■□□□ 1.99
CLPB-202ENST00000340729 USP35Q9P2H5 1018 aa27.45■■□□□ 1.99
CLPB-202ENST00000340729 KDM2AQ9Y2K7 1162 aa27.45■■□□□ 1.99
CLPB-202ENST00000340729 ARHGAP5Q13017 1502 aa27.44■■□□□ 1.98
CLPB-202ENST00000340729 HNRNPMP52272 730 aaKnown RBP eCLIP27.44■■□□□ 1.98
CLPB-202ENST00000340729 PRDM15P57071 1507 aaPredicted RBP27.43■■□□□ 1.98
CLPB-202ENST00000340729 SYCP2Q9BX26 1530 aa27.43■■□□□ 1.98
CLPB-202ENST00000340729 SENP3-EIF4A1A0A087X0R7 540 aa27.43■■□□□ 1.98
CLPB-202ENST00000340729 CCDC141Q6ZP82 1450 aa27.42■■□□□ 1.98
CLPB-202ENST00000340729 CCDC144AA2RUR9 1427 aa27.4■■□□□ 1.98
CLPB-202ENST00000340729 UNC13BO14795 1591 aa27.39■■□□□ 1.98
CLPB-202ENST00000340729 EIF2AK4Q9P2K8 1649 aaKnown RBP27.39■■□□□ 1.98
CLPB-202ENST00000340729 RSPH4AQ5TD94 716 aa27.37■■□□□ 1.97
CLPB-202ENST00000340729 MAST1Q9Y2H9 1570 aa27.36■■□□□ 1.97
CLPB-202ENST00000340729 A2MP01023 1474 aa27.34■■□□□ 1.97
CLPB-202ENST00000340729 PPM1GO15355 546 aaPredicted RBP27.32■■□□□ 1.96
CLPB-202ENST00000340729 TESK2Q96S53 571 aa27.31■■□□□ 1.96
CLPB-202ENST00000340729 PLA2R1Q13018 1463 aa27.31■■□□□ 1.96
CLPB-202ENST00000340729 CDCA7LQ96GN5 454 aa27.31■■□□□ 1.96
CLPB-202ENST00000340729 NPM2Q86SE8 214 aaKnown RBP27.3■■□□□ 1.96
CLPB-202ENST00000340729 ERBINQ96RT1 1412 aa27.29■■□□□ 1.96
CLPB-202ENST00000340729 DDRGK1Q96HY6 314 aa27.29■■□□□ 1.96
CLPB-202ENST00000340729 IQGAP3Q86VI3 1631 aa27.29■■□□□ 1.96
CLPB-202ENST00000340729 ATP10AO60312 1499 aa27.28■■□□□ 1.96
CLPB-202ENST00000340729 DISP3Q9P2K9 1392 aa27.28■■□□□ 1.96
CLPB-202ENST00000340729 SALL2Q9Y467 1007 aaPredicted RBP27.26■■□□□ 1.95
CLPB-202ENST00000340729 RNF17Q9BXT8 1623 aaKnown RBP27.26■■□□□ 1.95
CLPB-202ENST00000340729 NBPF1Q3BBV0 1214 aa27.26■■□□□ 1.95
CLPB-202ENST00000340729 PLCH2O75038 1416 aa27.25■■□□□ 1.95
CLPB-202ENST00000340729 PLXNC1O60486 1568 aa27.24■■□□□ 1.95
CLPB-202ENST00000340729 NEFMP07197 916 aa27.23■■□□□ 1.95
CLPB-202ENST00000340729 CRBNQ96SW2 442 aa27.23■■□□□ 1.95
CLPB-202ENST00000340729 ABCC1P33527 1531 aa27.23■■□□□ 1.95
CLPB-202ENST00000340729 TMF1P82094 1093 aa27.21■■□□□ 1.95
CLPB-202ENST00000340729 PANK3Q9H999 370 aa27.21■■□□□ 1.95
CLPB-202ENST00000340729 KDM2BQ8NHM5 1336 aa27.2■■□□□ 1.95
CLPB-202ENST00000340729 MAGI2Q86UL8 1455 aa27.19■■□□□ 1.94
CLPB-202ENST00000340729 CC2D1BQ5T0F9 858 aaKnown RBP27.19■■□□□ 1.94
CLPB-202ENST00000340729 WDR7Q9Y4E6 1490 aa27.18■■□□□ 1.94
CLPB-202ENST00000340729 PLIN1O60240 522 aa27.18■■□□□ 1.94
CLPB-202ENST00000340729 LAS1LQ9Y4W2 734 aaKnown RBP27.17■■□□□ 1.94
CLPB-202ENST00000340729 CENPQQ7L2Z9 268 aaPredicted RBP27.15■■□□□ 1.94
CLPB-202ENST00000340729 RGL3Q3MIN7 710 aa27.13■■□□□ 1.93
CLPB-202ENST00000340729 ARAP3Q8WWN8 1544 aa27.13■■□□□ 1.93
CLPB-202ENST00000340729 ZNF521Q96K83 1311 aa27.12■■□□□ 1.93
CLPB-202ENST00000340729 ABCA9Q8IUA7 1624 aa27.11■■□□□ 1.93
CLPB-202ENST00000340729 DUOX2Q9NRD8 1548 aa27.11■■□□□ 1.93
CLPB-202ENST00000340729 TRAPPC8Q9Y2L5 1435 aa27.1■■□□□ 1.93
CLPB-202ENST00000340729 IQGAP1P46940 1657 aa27.1■■□□□ 1.93
CLPB-202ENST00000340729 EFCAB2Q5VUJ9 269 aa27.1■■□□□ 1.93
CLPB-202ENST00000340729 SYNMO15061 1565 aa27.09■■□□□ 1.93
CLPB-202ENST00000340729 DUSP27Q5VZP5 1158 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms