RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 ASXL2Q76L83 1435 aa13.96□□□□□ -0.17
RBFOX1-202ENST00000340209 TEX14Q8IWB6 1497 aa13.96□□□□□ -0.17
RBFOX1-202ENST00000340209 ADGBQ8N7X0 1667 aa13.96□□□□□ -0.17
RBFOX1-202ENST00000340209 MLECQ14165 292 aa13.95□□□□□ -0.18
RBFOX1-202ENST00000340209 FANCAO15360 1455 aa13.94□□□□□ -0.18
RBFOX1-202ENST00000340209 CLASP1Q7Z460 1538 aa13.94□□□□□ -0.18
RBFOX1-202ENST00000340209 PREX2Q70Z35 1606 aa13.94□□□□□ -0.18
RBFOX1-202ENST00000340209 CC2D1BQ5T0F9 858 aaKnown RBP13.94□□□□□ -0.18
RBFOX1-202ENST00000340209 SUPT16HQ9Y5B9 1047 aaKnown RBP13.93□□□□□ -0.18
RBFOX1-202ENST00000340209 FAM135AQ9P2D6 1515 aa13.93□□□□□ -0.18
RBFOX1-202ENST00000340209 CCER2I3L3R5 266 aa13.93□□□□□ -0.18
RBFOX1-202ENST00000340209 PRKRIP1Q9H875 184 aaPredicted RBP13.93□□□□□ -0.18
RBFOX1-202ENST00000340209 SHROOM2Q13796 1616 aa13.93□□□□□ -0.18
RBFOX1-202ENST00000340209 WDR7Q9Y4E6 1490 aa13.93□□□□□ -0.18
RBFOX1-202ENST00000340209 ADGRL1O94910 1474 aa13.92□□□□□ -0.18
RBFOX1-202ENST00000340209 SHANK2Q9UPX8 1470 aa13.92□□□□□ -0.18
RBFOX1-202ENST00000340209 MYO5CQ9NQX4 1742 aa13.92□□□□□ -0.18
RBFOX1-202ENST00000340209 CROCC2H7BZ55 1655 aa13.91□□□□□ -0.18
RBFOX1-202ENST00000340209 CNTLNQ9NXG0 1405 aa13.91□□□□□ -0.18
RBFOX1-202ENST00000340209 TMC1Q8TDI8 760 aa13.9□□□□□ -0.18
RBFOX1-202ENST00000340209 KANK1Q14678 1352 aa13.9□□□□□ -0.18
RBFOX1-202ENST00000340209 FAM69CQ0P6D2 419 aa13.89□□□□□ -0.19
RBFOX1-202ENST00000340209 SAFB2Q14151 953 aaKnown RBP eCLIP13.88□□□□□ -0.19
RBFOX1-202ENST00000340209 CD109Q6YHK3 1445 aa13.87□□□□□ -0.19
RBFOX1-202ENST00000340209 WASHC2CQ9Y4E1 1318 aa13.87□□□□□ -0.19
RBFOX1-202ENST00000340209 ARHGEF5Q12774 1597 aa13.86□□□□□ -0.19
RBFOX1-202ENST00000340209 CFAP65Q6ZU64 1925 aaKnown RBP13.84□□□□□ -0.19
RBFOX1-202ENST00000340209 CFAP70Q5T0N1 1121 aa13.83□□□□□ -0.2
RBFOX1-202ENST00000340209 STAG3Q9UJ98 1225 aa13.82□□□□□ -0.2
RBFOX1-202ENST00000340209 UHRF1BP1LA0JNW5 1464 aa13.82□□□□□ -0.2
RBFOX1-202ENST00000340209 DUOX2Q9NRD8 1548 aa13.81□□□□□ -0.2
RBFOX1-202ENST00000340209 ABCC1P33527 1531 aa13.81□□□□□ -0.2
RBFOX1-202ENST00000340209 PELP1Q8IZL8 1130 aaKnown RBP13.8□□□□□ -0.2
RBFOX1-202ENST00000340209 PLA2R1Q13018 1463 aa13.8□□□□□ -0.2
RBFOX1-202ENST00000340209 TMEM132EQ6IEE7 984 aa13.8□□□□□ -0.2
RBFOX1-202ENST00000340209 PANK3Q9H999 370 aa13.8□□□□□ -0.2
RBFOX1-202ENST00000340209 TRAK1Q9UPV9 953 aa13.8□□□□□ -0.2
RBFOX1-202ENST00000340209 STK26Q9P289 416 aa13.8□□□□□ -0.2
RBFOX1-202ENST00000340209 TNNT2P45379 298 aaPredicted RBP13.8□□□□□ -0.2
RBFOX1-202ENST00000340209 TMF1P82094 1093 aa13.8□□□□□ -0.2
RBFOX1-202ENST00000340209 A2MP01023 1474 aa13.78□□□□□ -0.2
RBFOX1-202ENST00000340209 SPATA31E1Q6ZUB1 1445 aa13.77□□□□□ -0.2
RBFOX1-202ENST00000340209 ARID4BQ4LE39 1312 aaPredicted RBP13.77□□□□□ -0.21
RBFOX1-202ENST00000340209 ERBINQ96RT1 1412 aa13.77□□□□□ -0.21
RBFOX1-202ENST00000340209 ADGRF5Q8IZF2 1346 aa13.76□□□□□ -0.21
RBFOX1-202ENST00000340209 ATP7AQ04656 1500 aa13.76□□□□□ -0.21
RBFOX1-202ENST00000340209 PRAG1Q86YV5 1406 aa13.76□□□□□ -0.21
RBFOX1-202ENST00000340209 UGGT1Q9NYU2 1555 aa13.76□□□□□ -0.21
RBFOX1-202ENST00000340209 DISP3Q9P2K9 1392 aa13.76□□□□□ -0.21
RBFOX1-202ENST00000340209 RALGAPBQ86X10 1494 aa13.75□□□□□ -0.21
RBFOX1-202ENST00000340209 DHX29Q7Z478 1369 aaKnown RBP13.75□□□□□ -0.21
RBFOX1-202ENST00000340209 KNSTRNQ9Y448 316 aa13.74□□□□□ -0.21
RBFOX1-202ENST00000340209 ZFYVE16Q7Z3T8 1539 aa13.73□□□□□ -0.21
RBFOX1-202ENST00000340209 BCORL1Q5H9F3 1711 aa13.73□□□□□ -0.21
RBFOX1-202ENST00000340209 ESF1Q9H501 851 aaKnown RBP13.72□□□□□ -0.21
RBFOX1-202ENST00000340209 MAST1Q9Y2H9 1570 aa13.72□□□□□ -0.21
RBFOX1-202ENST00000340209 FBXO31Q5XUX0 539 aaPredicted RBP13.71□□□□□ -0.22
RBFOX1-202ENST00000340209 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.22
RBFOX1-202ENST00000340209 KDM5DQ9BY66 1539 aa13.7□□□□□ -0.22
RBFOX1-202ENST00000340209 ZNF518AQ6AHZ1 1483 aa13.69□□□□□ -0.22
RBFOX1-202ENST00000340209 KDM5CP41229 1560 aa13.68□□□□□ -0.22
RBFOX1-202ENST00000340209 ATP10AO60312 1499 aa13.68□□□□□ -0.22
RBFOX1-202ENST00000340209 TESK2Q96S53 571 aa13.68□□□□□ -0.22
RBFOX1-202ENST00000340209 UHRF1BP1Q6BDS2 1440 aa13.68□□□□□ -0.22
RBFOX1-202ENST00000340209 PLXNC1O60486 1568 aa13.68□□□□□ -0.22
RBFOX1-202ENST00000340209 TRHP20396 242 aaPredicted RBP13.68□□□□□ -0.22
RBFOX1-202ENST00000340209 RTEL1-TNFRSF6BF6WH68 1400 aa13.67□□□□□ -0.22
RBFOX1-202ENST00000340209 MYBBP1AQ9BQG0 1328 aaKnown RBP13.66□□□□□ -0.22
RBFOX1-202ENST00000340209 B4GALNT3Q6L9W6 998 aa13.66□□□□□ -0.22
RBFOX1-202ENST00000340209 YEATS2Q9ULM3 1422 aa13.66□□□□□ -0.22
RBFOX1-202ENST00000340209 UNC13BO14795 1591 aa13.66□□□□□ -0.22
RBFOX1-202ENST00000340209 NOS1P29475 1434 aa13.65□□□□□ -0.22
RBFOX1-202ENST00000340209 TSPOAP1O95153 1857 aa13.65□□□□□ -0.22
RBFOX1-202ENST00000340209 IQGAP3Q86VI3 1631 aa13.64□□□□□ -0.23
RBFOX1-202ENST00000340209 ABCA9Q8IUA7 1624 aa13.64□□□□□ -0.23
RBFOX1-202ENST00000340209 POGZQ7Z3K3 1410 aa13.64□□□□□ -0.23
RBFOX1-202ENST00000340209 WDR43Q15061 677 aaKnown RBP eCLIP13.64□□□□□ -0.23
RBFOX1-202ENST00000340209 CCDC146Q8IYE0 955 aa13.64□□□□□ -0.23
RBFOX1-202ENST00000340209 IDI1Q13907 227 aa13.64□□□□□ -0.23
RBFOX1-202ENST00000340209 RALBP1Q15311 655 aa13.63□□□□□ -0.23
RBFOX1-202ENST00000340209 NLRP13Q86W25 1043 aa13.63□□□□□ -0.23
RBFOX1-202ENST00000340209 NEUROD2Q15784 382 aa13.63□□□□□ -0.23
RBFOX1-202ENST00000340209 PNISRQ8TF01 805 aaKnown RBP13.63□□□□□ -0.23
RBFOX1-202ENST00000340209 E9PCH4 1651 aa13.62□□□□□ -0.23
RBFOX1-202ENST00000340209 SRPK2P78362 688 aaKnown RBP13.62□□□□□ -0.23
RBFOX1-202ENST00000340209 POGKQ9P215 609 aa13.62□□□□□ -0.23
RBFOX1-202ENST00000340209 ZBED9Q6R2W3 1325 aa13.61□□□□□ -0.23
RBFOX1-202ENST00000340209 MINK1Q8N4C8 1332 aaPredicted RBP13.61□□□□□ -0.23
RBFOX1-202ENST00000340209 CDCA8Q53HL2 280 aa13.6□□□□□ -0.23
RBFOX1-202ENST00000340209 SLC12A5Q9H2X9 1139 aa13.6□□□□□ -0.23
RBFOX1-202ENST00000340209 CABP2Q9NPB3 220 aa13.6□□□□□ -0.23
RBFOX1-202ENST00000340209 CLTCL1P53675 1640 aa13.6□□□□□ -0.23
RBFOX1-202ENST00000340209 CDCA7LQ96GN5 454 aa13.59□□□□□ -0.23
RBFOX1-202ENST00000340209 NPATQ14207 1427 aa13.59□□□□□ -0.23
RBFOX1-202ENST00000340209 CENPJQ9HC77 1338 aaPredicted RBP13.59□□□□□ -0.23
RBFOX1-202ENST00000340209 PRDM15P57071 1507 aaPredicted RBP13.59□□□□□ -0.23
RBFOX1-202ENST00000340209 EIF3AQ14152 1382 aaKnown RBP13.59□□□□□ -0.23
RBFOX1-202ENST00000340209 NUTM2FA1L443 756 aa13.58□□□□□ -0.24
RBFOX1-202ENST00000340209 KIDINS220Q9ULH0 1771 aa13.57□□□□□ -0.24
RBFOX1-202ENST00000340209 INO80Q9ULG1 1556 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms