RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 KIF3BO15066 747 aa21.61■■□□□ 1.05
MBD1-203ENST00000339998 UNC13BO14795 1591 aa21.61■■□□□ 1.05
MBD1-203ENST00000339998 CCDC7Q96M83 1385 aa21.61■■□□□ 1.05
MBD1-203ENST00000339998 CARD11Q9BXL7 1154 aa21.6■■□□□ 1.05
MBD1-203ENST00000339998 ZFYVE16Q7Z3T8 1539 aa21.6■■□□□ 1.05
MBD1-203ENST00000339998 USP47Q96K76 1375 aa21.6■■□□□ 1.05
MBD1-203ENST00000339998 ERBINQ96RT1 1412 aa21.58■■□□□ 1.05
MBD1-203ENST00000339998 NBPF1Q3BBV0 1214 aa21.57■■□□□ 1.04
MBD1-203ENST00000339998 CD109Q6YHK3 1445 aa21.56■■□□□ 1.04
MBD1-203ENST00000339998 ARAP3Q8WWN8 1544 aa21.55■■□□□ 1.04
MBD1-203ENST00000339998 CCDC184Q52MB2 194 aa21.55■■□□□ 1.04
MBD1-203ENST00000339998 IQGAP3Q86VI3 1631 aa21.54■■□□□ 1.04
MBD1-203ENST00000339998 ATP7AQ04656 1500 aa21.54■■□□□ 1.04
MBD1-203ENST00000339998 RAPGEF3O95398 923 aa21.54■■□□□ 1.04
MBD1-203ENST00000339998 ST20-MTHFSA0A0A6YYL1 179 aa21.53■■□□□ 1.04
MBD1-203ENST00000339998 BCORL1Q5H9F3 1711 aa21.52■■□□□ 1.04
MBD1-203ENST00000339998 RTEL1-TNFRSF6BF6WH68 1400 aa21.52■■□□□ 1.03
MBD1-203ENST00000339998 MAGI2Q86UL8 1455 aa21.5■■□□□ 1.03
MBD1-203ENST00000339998 UHRF1BP1Q6BDS2 1440 aa21.5■■□□□ 1.03
MBD1-203ENST00000339998 CNTLNQ9NXG0 1405 aa21.5■■□□□ 1.03
MBD1-203ENST00000339998 CCER2I3L3R5 266 aa21.49■■□□□ 1.03
MBD1-203ENST00000339998 ROCK2O75116 1388 aaKnown RBP21.49■■□□□ 1.03
MBD1-203ENST00000339998 A2MP01023 1474 aa21.49■■□□□ 1.03
MBD1-203ENST00000339998 INO80Q9ULG1 1556 aaPredicted RBP21.48■■□□□ 1.03
MBD1-203ENST00000339998 RALGAPBQ86X10 1494 aa21.47■■□□□ 1.03
MBD1-203ENST00000339998 KDM5CP41229 1560 aa21.47■■□□□ 1.03
MBD1-203ENST00000339998 GGT6Q6P531 493 aa21.45■■□□□ 1.02
MBD1-203ENST00000339998 E9PCH4 1651 aa21.45■■□□□ 1.02
MBD1-203ENST00000339998 DHX29Q7Z478 1369 aaKnown RBP21.45■■□□□ 1.02
MBD1-203ENST00000339998 PRAG1Q86YV5 1406 aa21.44■■□□□ 1.02
MBD1-203ENST00000339998 KIDINS220Q9ULH0 1771 aa21.44■■□□□ 1.02
MBD1-203ENST00000339998 PRKRIP1Q9H875 184 aaPredicted RBP21.43■■□□□ 1.02
MBD1-203ENST00000339998 ATP10AO60312 1499 aa21.42■■□□□ 1.02
MBD1-203ENST00000339998 ZNF518AQ6AHZ1 1483 aa21.4■■□□□ 1.02
MBD1-203ENST00000339998 CFAP65Q6ZU64 1925 aaKnown RBP21.4■■□□□ 1.02
MBD1-203ENST00000339998 UGGT1Q9NYU2 1555 aa21.39■■□□□ 1.01
MBD1-203ENST00000339998 POGZQ7Z3K3 1410 aa21.37■■□□□ 1.01
MBD1-203ENST00000339998 KANK1Q14678 1352 aa21.37■■□□□ 1.01
MBD1-203ENST00000339998 SENP3-EIF4A1A0A087X0R7 540 aa21.36■■□□□ 1.01
MBD1-203ENST00000339998 FAM9BQ8IZU0 186 aa21.36■■□□□ 1.01
MBD1-203ENST00000339998 RIMBP3CA6NJZ7 1639 aa21.35■■□□□ 1.01
MBD1-203ENST00000339998 RIMBP3BA6NNM3 1639 aa21.35■■□□□ 1.01
MBD1-203ENST00000339998 MROH1Q8NDA8 1641 aa21.35■■□□□ 1.01
MBD1-203ENST00000339998 RIMBP3Q9UFD9 1639 aa21.35■■□□□ 1.01
MBD1-203ENST00000339998 FAM69CQ0P6D2 419 aa21.35■■□□□ 1.01
MBD1-203ENST00000339998 DEPDC5O75140 1603 aa21.35■■□□□ 1.01
MBD1-203ENST00000339998 TRPM1Q7Z4N2 1603 aa21.35■■□□□ 1.01
MBD1-203ENST00000339998 HNRNPUQ00839 825 aaKnown RBP eCLIP21.34■■□□□ 1.01
MBD1-203ENST00000339998 MRS2Q9HD23 443 aa21.33■■□□□ 1.01
MBD1-203ENST00000339998 CLTCL1P53675 1640 aa21.33■■□□□ 1
MBD1-203ENST00000339998 POLR1AO95602 1720 aaPredicted RBP21.32■■□□□ 1
MBD1-203ENST00000339998 CHGAP10645 457 aaKnown RBP21.32■■□□□ 1
MBD1-203ENST00000339998 SENP3Q9H4L4 574 aaPredicted RBP21.31■■□□□ 1
MBD1-203ENST00000339998 SPHKAPQ2M3C7 1700 aa21.3■■□□□ 1
MBD1-203ENST00000339998 PTPRTO14522 1441 aa21.3■■□□□ 1
MBD1-203ENST00000339998 TET3O43151 1660 aa21.3■■□□□ 1
MBD1-203ENST00000339998 FRMPD1Q5SYB0 1578 aa21.3■■□□□ 1
MBD1-203ENST00000339998 VWDEQ8N2E2 1590 aa21.29■■□□□ 1
MBD1-203ENST00000339998 TRPM2O94759 1503 aa21.29■■□□□ 1
MBD1-203ENST00000339998 PRDM15P57071 1507 aaPredicted RBP21.28■■□□□ 1
MBD1-203ENST00000339998 CEP152O94986 1710 aa21.27■■□□□ 1
MBD1-203ENST00000339998 TESK2Q96S53 571 aa21.27■□□□□ 0.99
MBD1-203ENST00000339998 ABCA6Q8N139 1617 aa21.27■□□□□ 0.99
MBD1-203ENST00000339998 WASHC2CQ9Y4E1 1318 aa21.26■□□□□ 0.99
MBD1-203ENST00000339998 YEATS2Q9ULM3 1422 aa21.26■□□□□ 0.99
MBD1-203ENST00000339998 DISP3Q9P2K9 1392 aa21.26■□□□□ 0.99
MBD1-203ENST00000339998 MLH3Q9UHC1 1453 aa21.26■□□□□ 0.99
MBD1-203ENST00000339998 HECW2Q9P2P5 1572 aa21.25■□□□□ 0.99
MBD1-203ENST00000339998 TSPOAP1O95153 1857 aa21.25■□□□□ 0.99
MBD1-203ENST00000339998 PPRC1Q5VV67 1664 aaKnown RBP21.25■□□□□ 0.99
MBD1-203ENST00000339998 NUTM2DQ5VT03 806 aaPredicted RBP21.24■□□□□ 0.99
MBD1-203ENST00000339998 ADGRF5Q8IZF2 1346 aa21.24■□□□□ 0.99
MBD1-203ENST00000339998 GPRASP1Q5JY77 1395 aa21.24■□□□□ 0.99
MBD1-203ENST00000339998 SUPT16HQ9Y5B9 1047 aaKnown RBP21.24■□□□□ 0.99
MBD1-203ENST00000339998 EIF2AK4Q9P2K8 1649 aaKnown RBP21.23■□□□□ 0.99
MBD1-203ENST00000339998 CFAP70Q5T0N1 1121 aa21.23■□□□□ 0.99
MBD1-203ENST00000339998 CFAP74Q9C0B2 1584 aa21.22■□□□□ 0.99
MBD1-203ENST00000339998 NEO1Q92859 1461 aa21.22■□□□□ 0.99
MBD1-203ENST00000339998 BCANQ96GW7 911 aa21.21■□□□□ 0.99
MBD1-203ENST00000339998 NPATQ14207 1427 aa21.21■□□□□ 0.99
MBD1-203ENST00000339998 EFCAB6Q5THR3 1501 aa21.21■□□□□ 0.99
MBD1-203ENST00000339998 ARID4BQ4LE39 1312 aaPredicted RBP21.18■□□□□ 0.98
MBD1-203ENST00000339998 MADDQ8WXG6 1647 aa21.18■□□□□ 0.98
MBD1-203ENST00000339998 MAP3K4Q9Y6R4 1608 aa21.18■□□□□ 0.98
MBD1-203ENST00000339998 RNF17Q9BXT8 1623 aaKnown RBP21.16■□□□□ 0.98
MBD1-203ENST00000339998 DIP2CQ9Y2E4 1556 aa21.16■□□□□ 0.98
MBD1-203ENST00000339998 RICTORQ6R327 1708 aa21.15■□□□□ 0.98
MBD1-203ENST00000339998 FKBP8Q14318 412 aa21.15■□□□□ 0.98
MBD1-203ENST00000339998 MROH2AA6NES4 1674 aa21.14■□□□□ 0.97
MBD1-203ENST00000339998 CC2D1BQ5T0F9 858 aaKnown RBP21.14■□□□□ 0.97
MBD1-203ENST00000339998 PANK3Q9H999 370 aa21.14■□□□□ 0.97
MBD1-203ENST00000339998 TMF1P82094 1093 aa21.12■□□□□ 0.97
MBD1-203ENST00000339998 DIP2BQ9P265 1576 aa21.12■□□□□ 0.97
MBD1-203ENST00000339998 NOS1P29475 1434 aa21.11■□□□□ 0.97
MBD1-203ENST00000339998 ABCC3O15438 1527 aa21.11■□□□□ 0.97
MBD1-203ENST00000339998 MLECQ14165 292 aa21.11■□□□□ 0.97
MBD1-203ENST00000339998 COL17A1Q9UMD9 1497 aaPredicted RBP21.11■□□□□ 0.97
MBD1-203ENST00000339998 PER1O15534 1290 aaPredicted RBP21.1■□□□□ 0.97
MBD1-203ENST00000339998 TMEM132EQ6IEE7 984 aa21.1■□□□□ 0.97
MBD1-203ENST00000339998 KIF1BO60333 1816 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms