RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
RIOK3-201ENST00000339486 NBPF1Q3BBV0 1214 aa15.88■□□□□ 0.13
RIOK3-201ENST00000339486 UNC13AQ9UPW8 1703 aa15.88■□□□□ 0.13
RIOK3-201ENST00000339486 MIA2Q96PC5 1412 aa15.88■□□□□ 0.13
RIOK3-201ENST00000339486 BCL2L13Q9BXK5 485 aa15.88■□□□□ 0.13
RIOK3-201ENST00000339486 RWDD1Q9H446 243 aaPredicted RBP15.88■□□□□ 0.13
RIOK3-201ENST00000339486 ANKRD50Q9ULJ7 1429 aa15.87■□□□□ 0.13
RIOK3-201ENST00000339486 POLA1P09884 1462 aaPredicted RBP15.87■□□□□ 0.13
RIOK3-201ENST00000339486 U2SURPO15042 1029 aaKnown RBP15.87■□□□□ 0.13
RIOK3-201ENST00000339486 PMFBP1Q8TBY8 1022 aa15.87■□□□□ 0.13
RIOK3-201ENST00000339486 RRP7AQ9Y3A4 280 aaKnown RBP15.87■□□□□ 0.13
RIOK3-201ENST00000339486 KIAA1107Q9UPP5 1409 aa15.85■□□□□ 0.13
RIOK3-201ENST00000339486 C20orf194Q5TEA3 1177 aa15.85■□□□□ 0.13
RIOK3-201ENST00000339486 MYH16Q9H6N6 1097 aa15.85■□□□□ 0.13
RIOK3-201ENST00000339486 MAPK8IP3Q9UPT6 1336 aa15.85■□□□□ 0.13
RIOK3-201ENST00000339486 SUPT6HQ7KZ85 1726 aaKnown RBP15.85■□□□□ 0.13
RIOK3-201ENST00000339486 CGNL1Q0VF96 1302 aa15.84■□□□□ 0.13
RIOK3-201ENST00000339486 E9PSI1 815 aa15.84■□□□□ 0.13
RIOK3-201ENST00000339486 DAPK1P53355 1430 aa15.84■□□□□ 0.13
RIOK3-201ENST00000339486 RPRD2Q5VT52 1461 aaKnown RBP15.83■□□□□ 0.13
RIOK3-201ENST00000339486 SLC24A1O60721 1099 aa15.83■□□□□ 0.12
RIOK3-201ENST00000339486 PANK1Q8TE04 598 aa15.81■□□□□ 0.12
RIOK3-201ENST00000339486 CARMIL2Q6F5E8 1435 aa15.81■□□□□ 0.12
RIOK3-201ENST00000339486 TOPBP1Q92547 1522 aa15.81■□□□□ 0.12
RIOK3-201ENST00000339486 U2AF1L5P0DN76 240 aaPredicted RBP15.81■□□□□ 0.12
RIOK3-201ENST00000339486 U2AF1Q01081 240 aaKnown RBP eCLIP15.81■□□□□ 0.12
RIOK3-201ENST00000339486 JPH4Q96JJ6 628 aa15.8■□□□□ 0.12
RIOK3-201ENST00000339486 ITPRIPQ8IWB1 547 aa15.8■□□□□ 0.12
RIOK3-201ENST00000339486 CDK13Q14004 1512 aaKnown RBP15.8■□□□□ 0.12
RIOK3-201ENST00000339486 BCAR3O75815 825 aa15.78■□□□□ 0.12
RIOK3-201ENST00000339486 NESP48681 1621 aa15.78■□□□□ 0.12
RIOK3-201ENST00000339486 PPP2R1AP30153 589 aa15.78■□□□□ 0.12
RIOK3-201ENST00000339486 ROCK1Q13464 1354 aa15.77■□□□□ 0.12
RIOK3-201ENST00000339486 FOXD4L1Q9NU39 408 aa15.77■□□□□ 0.11
RIOK3-201ENST00000339486 EPRSP07814 1512 aaKnown RBP15.77■□□□□ 0.11
RIOK3-201ENST00000339486 ABCA10Q8WWZ4 1543 aa15.77■□□□□ 0.11
RIOK3-201ENST00000339486 GBP4Q96PP9 640 aa15.76■□□□□ 0.11
RIOK3-201ENST00000339486 SMC4Q9NTJ3 1288 aa15.76■□□□□ 0.11
RIOK3-201ENST00000339486 ABCC5O15440 1437 aa15.76■□□□□ 0.11
RIOK3-201ENST00000339486 RSPH4AQ5TD94 716 aa15.75■□□□□ 0.11
RIOK3-201ENST00000339486 WASHC2CQ9Y4E1 1318 aa15.75■□□□□ 0.11
RIOK3-201ENST00000339486 HSP90AA2PQ14568 343 aaPredicted RBP15.74■□□□□ 0.11
RIOK3-201ENST00000339486 PRG4Q92954 1404 aaPredicted RBP15.74■□□□□ 0.11
RIOK3-201ENST00000339486 SAFB2Q14151 953 aaKnown RBP eCLIP15.74■□□□□ 0.11
RIOK3-201ENST00000339486 PTMAP06454 111 aaKnown RBP15.74■□□□□ 0.11
RIOK3-201ENST00000339486 MSNP26038 577 aaKnown RBP15.73■□□□□ 0.11
RIOK3-201ENST00000339486 FAM43AQ8N2R8 423 aa15.73■□□□□ 0.11
RIOK3-201ENST00000339486 POGKQ9P215 609 aa15.73■□□□□ 0.11
RIOK3-201ENST00000339486 DHX29Q7Z478 1369 aaKnown RBP15.73■□□□□ 0.11
RIOK3-201ENST00000339486 RNF123Q5XPI4 1314 aa15.73■□□□□ 0.11
RIOK3-201ENST00000339486 VSIG10Q8N0Z9 540 aa15.72■□□□□ 0.11
RIOK3-201ENST00000339486 STAG3Q9UJ98 1225 aa15.72■□□□□ 0.11
RIOK3-201ENST00000339486 TPRNQ4KMQ1 711 aa15.72■□□□□ 0.11
RIOK3-201ENST00000339486 PRDM2Q13029 1718 aa15.71■□□□□ 0.11
RIOK3-201ENST00000339486 DNTTIP2Q5QJE6 756 aaKnown RBP15.7■□□□□ 0.1
RIOK3-201ENST00000339486 CHMP5Q9NZZ3 219 aa15.7■□□□□ 0.1
RIOK3-201ENST00000339486 CFAP43Q8NDM7 1665 aa15.69■□□□□ 0.1
RIOK3-201ENST00000339486 EIF3AQ14152 1382 aaKnown RBP15.69■□□□□ 0.1
RIOK3-201ENST00000339486 DDX11L8A8MPP1 907 aa15.69■□□□□ 0.1
RIOK3-201ENST00000339486 IPO8O15397 1037 aaKnown RBP15.69■□□□□ 0.1
RIOK3-201ENST00000339486 DNMBPQ6XZF7 1577 aa15.69■□□□□ 0.1
RIOK3-201ENST00000339486 HECW1Q76N89 1606 aa15.69■□□□□ 0.1
RIOK3-201ENST00000339486 ZKSCAN2Q63HK3 967 aa15.68■□□□□ 0.1
RIOK3-201ENST00000339486 C22orf23Q9BZE7 217 aa15.67■□□□□ 0.1
RIOK3-201ENST00000339486 EFCAB2Q5VUJ9 269 aa15.67■□□□□ 0.1
RIOK3-201ENST00000339486 TRAK1Q9UPV9 953 aa15.67■□□□□ 0.1
RIOK3-201ENST00000339486 GRIN2BQ13224 1484 aa15.67■□□□□ 0.1
RIOK3-201ENST00000339486 SLFN5Q08AF3 891 aa15.66■□□□□ 0.1
RIOK3-201ENST00000339486 ARID3AQ99856 593 aa15.66■□□□□ 0.1
RIOK3-201ENST00000339486 PDZRN3Q9UPQ7 1066 aa15.66■□□□□ 0.1
RIOK3-201ENST00000339486 PDE3AQ14432 1141 aa15.66■□□□□ 0.1
RIOK3-201ENST00000339486 DUSP27Q5VZP5 1158 aa15.66■□□□□ 0.1
RIOK3-201ENST00000339486 KANK1Q14678 1352 aa15.66■□□□□ 0.1
RIOK3-201ENST00000339486 UGGT2Q9NYU1 1516 aa15.65■□□□□ 0.1
RIOK3-201ENST00000339486 SRPK2P78362 688 aaKnown RBP15.65■□□□□ 0.1
RIOK3-201ENST00000339486 CASC1Q6TDU7 716 aa15.65■□□□□ 0.1
RIOK3-201ENST00000339486 SNAPC4Q5SXM2 1469 aa15.65■□□□□ 0.1
RIOK3-201ENST00000339486 TROQ12816 1431 aaPredicted RBP15.65■□□□□ 0.1
RIOK3-201ENST00000339486 C9orf84Q5VXU9 1444 aa15.65■□□□□ 0.1
RIOK3-201ENST00000339486 KIF3BO15066 747 aa15.65■□□□□ 0.1
RIOK3-201ENST00000339486 CHMP4BQ9H444 224 aaKnown RBP15.65■□□□□ 0.1
RIOK3-201ENST00000339486 APBB1O00213 710 aa15.65■□□□□ 0.1
RIOK3-201ENST00000339486 TRAK2O60296 914 aa15.65■□□□□ 0.1
RIOK3-201ENST00000339486 NGEFQ8N5V2 710 aa15.65■□□□□ 0.1
RIOK3-201ENST00000339486 ZBTB7CA1YPR0 619 aa15.64■□□□□ 0.09
RIOK3-201ENST00000339486 DZIP1LQ8IYY4 767 aaKnown RBP15.64■□□□□ 0.09
RIOK3-201ENST00000339486 ERBINQ96RT1 1412 aa15.63■□□□□ 0.09
RIOK3-201ENST00000339486 STK26Q9P289 416 aa15.62■□□□□ 0.09
RIOK3-201ENST00000339486 CUL7Q14999 1698 aa15.62■□□□□ 0.09
RIOK3-201ENST00000339486 TCP11L2Q8N4U5 519 aa15.61■□□□□ 0.09
RIOK3-201ENST00000339486 DDX49Q9Y6V7 483 aaKnown RBP15.61■□□□□ 0.09
RIOK3-201ENST00000339486 PLCB2Q00722 1185 aa15.61■□□□□ 0.09
RIOK3-201ENST00000339486 RUNDC1Q96C34 613 aa15.61■□□□□ 0.09
RIOK3-201ENST00000339486 ERCC6Q03468 1493 aa15.61■□□□□ 0.09
RIOK3-201ENST00000339486 PTMSP20962 102 aa15.61■□□□□ 0.09
RIOK3-201ENST00000339486 MRE11P49959 708 aa15.61■□□□□ 0.09
RIOK3-201ENST00000339486 C8orf34Q49A92 452 aa15.61■□□□□ 0.09
RIOK3-201ENST00000339486 SPAG9O60271 1321 aaKnown RBP15.61■□□□□ 0.09
RIOK3-201ENST00000339486 CALD1Q05682 793 aaKnown RBP15.6■□□□□ 0.09
RIOK3-201ENST00000339486 ANKRD45Q5TZF3 282 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms