RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 RSPH4AQ5TD94 716 aa9.97□□□□□ -0.81
TNPO1-201ENST00000337273 ZNF428Q96B54 188 aa9.97□□□□□ -0.81
TNPO1-201ENST00000337273 SRPK2P78362 688 aaKnown RBP9.97□□□□□ -0.81
TNPO1-201ENST00000337273 NPHP1O15259 732 aa9.97□□□□□ -0.81
TNPO1-201ENST00000337273 GSE1Q14687 1217 aa9.96□□□□□ -0.81
TNPO1-201ENST00000337273 NOC3LQ8WTT2 800 aaKnown RBP9.96□□□□□ -0.81
TNPO1-201ENST00000337273 ITPRIPQ8IWB1 547 aa9.96□□□□□ -0.82
TNPO1-201ENST00000337273 ANKRD30AQ9BXX3 1397 aa9.96□□□□□ -0.82
TNPO1-201ENST00000337273 ZBTB9Q96C00 473 aa9.96□□□□□ -0.82
TNPO1-201ENST00000337273 RRP7AQ9Y3A4 280 aaKnown RBP9.96□□□□□ -0.82
TNPO1-201ENST00000337273 FANCIQ9NVI1 1328 aa9.96□□□□□ -0.82
TNPO1-201ENST00000337273 ZFP91Q96JP5 570 aaPredicted RBP9.95□□□□□ -0.82
TNPO1-201ENST00000337273 KIF15Q9NS87 1388 aa9.95□□□□□ -0.82
TNPO1-201ENST00000337273 CARMIL2Q6F5E8 1435 aa9.95□□□□□ -0.82
TNPO1-201ENST00000337273 RAB3GAP2Q9H2M9 1393 aa9.95□□□□□ -0.82
TNPO1-201ENST00000337273 FAM161AQ3B820 660 aa9.95□□□□□ -0.82
TNPO1-201ENST00000337273 EXOC6Q8TAG9 804 aa9.95□□□□□ -0.82
TNPO1-201ENST00000337273 AAMPQ13685 434 aa9.94□□□□□ -0.82
TNPO1-201ENST00000337273 MSH5O43196 834 aa9.94□□□□□ -0.82
TNPO1-201ENST00000337273 STK31Q9BXU1 1019 aa9.94□□□□□ -0.82
TNPO1-201ENST00000337273 CENPJQ9HC77 1338 aaPredicted RBP9.93□□□□□ -0.82
TNPO1-201ENST00000337273 TPM3P06753 285 aa9.93□□□□□ -0.82
TNPO1-201ENST00000337273 CLUAP1Q96AJ1 413 aa9.93□□□□□ -0.82
TNPO1-201ENST00000337273 MPHOSPH9Q99550 1183 aa9.93□□□□□ -0.82
TNPO1-201ENST00000337273 KIF16BQ96L93 1317 aa9.93□□□□□ -0.82
TNPO1-201ENST00000337273 SMC4Q9NTJ3 1288 aa9.93□□□□□ -0.82
TNPO1-201ENST00000337273 CUX2O14529 1486 aa9.92□□□□□ -0.82
TNPO1-201ENST00000337273 CHMP3Q9Y3E7 222 aa9.92□□□□□ -0.82
TNPO1-201ENST00000337273 MTERF4Q7Z6M4 381 aaKnown RBP9.92□□□□□ -0.82
TNPO1-201ENST00000337273 MYBBP1AQ9BQG0 1328 aaKnown RBP9.92□□□□□ -0.82
TNPO1-201ENST00000337273 TERF2IPQ9NYB0 399 aa9.92□□□□□ -0.82
TNPO1-201ENST00000337273 CLSTN1O94985 981 aa9.92□□□□□ -0.82
TNPO1-201ENST00000337273 CCDC70Q6NSX1 233 aa9.92□□□□□ -0.82
TNPO1-201ENST00000337273 KDM4AO75164 1064 aa9.91□□□□□ -0.82
TNPO1-201ENST00000337273 U2AF1L5P0DN76 240 aaPredicted RBP9.91□□□□□ -0.82
TNPO1-201ENST00000337273 U2AF1Q01081 240 aaKnown RBP eCLIP9.91□□□□□ -0.826e-9■■■■■ 32
TNPO1-201ENST00000337273 PKD2Q13563 968 aa9.91□□□□□ -0.82
TNPO1-201ENST00000337273 ZBED9Q6R2W3 1325 aa9.91□□□□□ -0.82
TNPO1-201ENST00000337273 RBM25P49756 843 aaKnown RBP9.9□□□□□ -0.82
TNPO1-201ENST00000337273 BCL2L13Q9BXK5 485 aa9.9□□□□□ -0.82
TNPO1-201ENST00000337273 UACAQ9BZF9 1416 aa9.9□□□□□ -0.82
TNPO1-201ENST00000337273 CGNL1Q0VF96 1302 aa9.9□□□□□ -0.82
TNPO1-201ENST00000337273 CCDC18Q5T9S5 1454 aa9.9□□□□□ -0.83
TNPO1-201ENST00000337273 GOLGA6L19H0YKK7 550 aa9.9□□□□□ -0.83
TNPO1-201ENST00000337273 EIF4G1Q04637 1599 aaKnown RBP9.89□□□□□ -0.83
TNPO1-201ENST00000337273 TSR1Q2NL82 804 aaKnown RBP9.89□□□□□ -0.83
TNPO1-201ENST00000337273 ZNF592Q92610 1267 aa9.89□□□□□ -0.83
TNPO1-201ENST00000337273 CREBRFQ8IUR6 639 aa9.89□□□□□ -0.83
TNPO1-201ENST00000337273 LRRFIP1Q32MZ4 808 aaKnown RBP9.89□□□□□ -0.83
TNPO1-201ENST00000337273 SMARCA2P51531 1590 aa9.89□□□□□ -0.83
TNPO1-201ENST00000337273 E9PSI1 815 aa9.88□□□□□ -0.83
TNPO1-201ENST00000337273 TPM1P09493 284 aa9.88□□□□□ -0.83
TNPO1-201ENST00000337273 TEX35Q5T0J7 233 aa9.88□□□□□ -0.83
TNPO1-201ENST00000337273 KANK4Q5T7N3 995 aaPredicted RBP9.88□□□□□ -0.83
TNPO1-201ENST00000337273 TRERF1Q96PN7 1200 aa9.88□□□□□ -0.83
TNPO1-201ENST00000337273 CEP89Q96ST8 783 aa9.88□□□□□ -0.83
TNPO1-201ENST00000337273 TRIM6-TRIM34B2RNG4 842 aa9.88□□□□□ -0.83
TNPO1-201ENST00000337273 ZNF771Q7L3S4 317 aaPredicted RBP9.88□□□□□ -0.83
TNPO1-201ENST00000337273 IBSPP21815 317 aaPredicted RBP9.88□□□□□ -0.83
TNPO1-201ENST00000337273 NUTM2DQ5VT03 806 aaPredicted RBP9.88□□□□□ -0.83
TNPO1-201ENST00000337273 TPM2P07951 284 aa9.88□□□□□ -0.83
TNPO1-201ENST00000337273 DDX49Q9Y6V7 483 aaKnown RBP9.87□□□□□ -0.83
TNPO1-201ENST00000337273 NUP155O75694 1391 aa9.87□□□□□ -0.83
TNPO1-201ENST00000337273 MAP7D2Q96T17 732 aa9.87□□□□□ -0.83
TNPO1-201ENST00000337273 HSP90B1P14625 803 aaKnown RBP9.87□□□□□ -0.83
TNPO1-201ENST00000337273 CCAR2Q8N163 923 aaKnown RBP9.87□□□□□ -0.83
TNPO1-201ENST00000337273 SOGA1O94964 1423 aa9.87□□□□□ -0.83
TNPO1-201ENST00000337273 ZNF526Q8TF50 670 aaPredicted RBP9.87□□□□□ -0.83
TNPO1-201ENST00000337273 LMOD2Q6P5Q4 547 aa9.87□□□□□ -0.83
TNPO1-201ENST00000337273 PDE4AP27815 886 aa9.87□□□□□ -0.83
TNPO1-201ENST00000337273 ROCK1Q13464 1354 aa9.87□□□□□ -0.83
TNPO1-201ENST00000337273 ABCC8Q09428 1581 aa9.86□□□□□ -0.83
TNPO1-201ENST00000337273 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.86□□□□□ -0.83
TNPO1-201ENST00000337273 CRBNQ96SW2 442 aa9.86□□□□□ -0.83
TNPO1-201ENST00000337273 REC8O95072 547 aa9.86□□□□□ -0.83
TNPO1-201ENST00000337273 TAF7LQ5H9L4 462 aa9.86□□□□□ -0.83
TNPO1-201ENST00000337273 GORABQ5T7V8 394 aa9.86□□□□□ -0.83
TNPO1-201ENST00000337273 SKIDA1Q1XH10 827 aa9.85□□□□□ -0.83
TNPO1-201ENST00000337273 SF3A1Q15459 793 aaKnown RBP9.85□□□□□ -0.83
TNPO1-201ENST00000337273 ERCC6Q03468 1493 aa9.85□□□□□ -0.83
TNPO1-201ENST00000337273 STAC3Q96MF2 364 aa9.85□□□□□ -0.83
TNPO1-201ENST00000337273 ZHX1Q9UKY1 873 aaPredicted RBP9.85□□□□□ -0.83
TNPO1-201ENST00000337273 TMX4Q9H1E5 349 aaPredicted RBP9.84□□□□□ -0.83
TNPO1-201ENST00000337273 BECN2A8MW95 431 aa9.84□□□□□ -0.83
TNPO1-201ENST00000337273 CHMP5Q9NZZ3 219 aa9.84□□□□□ -0.83
TNPO1-201ENST00000337273 HOOK1Q9UJC3 728 aaKnown RBP9.84□□□□□ -0.83
TNPO1-201ENST00000337273 EFCAB2Q5VUJ9 269 aa9.84□□□□□ -0.83
TNPO1-201ENST00000337273 RRP1P56182 461 aaKnown RBP9.84□□□□□ -0.83
TNPO1-201ENST00000337273 RUFY2Q8WXA3 655 aa9.84□□□□□ -0.83
TNPO1-201ENST00000337273 DDX19BQ9UMR2 479 aa9.83□□□□□ -0.84
TNPO1-201ENST00000337273 NUCB2P80303 420 aa9.83□□□□□ -0.84
TNPO1-201ENST00000337273 NOM1Q5C9Z4 860 aaKnown RBP9.83□□□□□ -0.84
TNPO1-201ENST00000337273 H3BQV1 296 aa9.83□□□□□ -0.84
TNPO1-201ENST00000337273 IFFO2Q5TF58 517 aa9.83□□□□□ -0.84
TNPO1-201ENST00000337273 CPLX2Q6PUV4 134 aaKnown RBP9.83□□□□□ -0.84
TNPO1-201ENST00000337273 FAM184AQ8NB25 1140 aa9.83□□□□□ -0.84
TNPO1-201ENST00000337273 ZKSCAN2Q63HK3 967 aa9.82□□□□□ -0.84
TNPO1-201ENST00000337273 ACBD3Q9H3P7 528 aa9.82□□□□□ -0.84
TNPO1-201ENST00000337273 FRAT2O75474 233 aaPredicted RBP9.82□□□□□ -0.84
TNPO1-201ENST00000337273 AEBP1Q8IUX7 1158 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms