RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 MIER1Q8N108 512 aa9.44□□□□□ -0.9
EPHA3-201ENST00000336596 HSPA5P11021 654 aaKnown RBP9.43□□□□□ -0.9
EPHA3-201ENST00000336596 ANKRD50Q9ULJ7 1429 aa9.43□□□□□ -0.9
EPHA3-201ENST00000336596 ANP32EQ9BTT0 268 aa9.42□□□□□ -0.9
EPHA3-201ENST00000336596 MIA2Q96PC5 1412 aa9.42□□□□□ -0.9
EPHA3-201ENST00000336596 WWC1Q8IX03 1113 aa9.42□□□□□ -0.9
EPHA3-201ENST00000336596 DMRT2Q9Y5R5 561 aa9.42□□□□□ -0.9
EPHA3-201ENST00000336596 PCF11O94913 1555 aaKnown RBP9.42□□□□□ -0.9
EPHA3-201ENST00000336596 SUPT6HQ7KZ85 1726 aaKnown RBP9.42□□□□□ -0.9
EPHA3-201ENST00000336596 TNNT2P45379 298 aaPredicted RBP9.41□□□□□ -0.9
EPHA3-201ENST00000336596 BECN1Q14457 450 aa9.41□□□□□ -0.9
EPHA3-201ENST00000336596 DHX57Q6P158 1386 aaKnown RBP9.41□□□□□ -0.9
EPHA3-201ENST00000336596 EIF4G3O43432 1585 aaKnown RBP9.41□□□□□ -0.9
EPHA3-201ENST00000336596 U2SURPO15042 1029 aaKnown RBP9.41□□□□□ -0.9
EPHA3-201ENST00000336596 CC2D1BQ5T0F9 858 aaKnown RBP9.41□□□□□ -0.9
EPHA3-201ENST00000336596 SCAPERQ9BY12 1400 aa9.4□□□□□ -0.9
EPHA3-201ENST00000336596 GOLGA6L22H0YM25 854 aa9.4□□□□□ -0.9
EPHA3-201ENST00000336596 PSME1Q06323 249 aa9.4□□□□□ -0.9
EPHA3-201ENST00000336596 RAPGEF3O95398 923 aa9.4□□□□□ -0.9
EPHA3-201ENST00000336596 C9orf84Q5VXU9 1444 aa9.39□□□□□ -0.91
EPHA3-201ENST00000336596 ADAMTS12P58397 1594 aa9.39□□□□□ -0.91
EPHA3-201ENST00000336596 GTF3C3Q9Y5Q9 886 aa9.39□□□□□ -0.91
EPHA3-201ENST00000336596 CD109Q6YHK3 1445 aa9.39□□□□□ -0.91
EPHA3-201ENST00000336596 IPO8O15397 1037 aaKnown RBP9.39□□□□□ -0.91
EPHA3-201ENST00000336596 LAS1LQ9Y4W2 734 aaKnown RBP9.39□□□□□ -0.91
EPHA3-201ENST00000336596 ARHGEF11O15085 1522 aa9.38□□□□□ -0.91
EPHA3-201ENST00000336596 MCCP23508 829 aa9.38□□□□□ -0.91
EPHA3-201ENST00000336596 RRBP1Q9P2E9 1410 aaKnown RBP9.38□□□□□ -0.91
EPHA3-201ENST00000336596 SOX12O15370 315 aa9.38□□□□□ -0.91
EPHA3-201ENST00000336596 GPATCH3Q96I76 525 aa9.38□□□□□ -0.91
EPHA3-201ENST00000336596 AMPHP49418 695 aa9.37□□□□□ -0.91
EPHA3-201ENST00000336596 TRAK1Q9UPV9 953 aa9.37□□□□□ -0.91
EPHA3-201ENST00000336596 HSP90B1P14625 803 aaKnown RBP9.37□□□□□ -0.91
EPHA3-201ENST00000336596 KIF14Q15058 1648 aa9.37□□□□□ -0.91
EPHA3-201ENST00000336596 GTF2E1P29083 439 aaPredicted RBP9.37□□□□□ -0.91
EPHA3-201ENST00000336596 GOLGA6L6A8MZA4 724 aa9.36□□□□□ -0.91
EPHA3-201ENST00000336596 DDRGK1Q96HY6 314 aa9.36□□□□□ -0.91
EPHA3-201ENST00000336596 C1orf141Q5JVX7 400 aa9.36□□□□□ -0.91
EPHA3-201ENST00000336596 STK31Q9BXU1 1019 aa9.36□□□□□ -0.91
EPHA3-201ENST00000336596 FGD1P98174 961 aa9.36□□□□□ -0.91
EPHA3-201ENST00000336596 TAF7LQ5H9L4 462 aa9.36□□□□□ -0.91
EPHA3-201ENST00000336596 CCDC136Q96JN2 1154 aa9.36□□□□□ -0.91
EPHA3-201ENST00000336596 KTN1Q86UP2 1357 aaKnown RBP9.36□□□□□ -0.91
EPHA3-201ENST00000336596 THEMISQ8N1K5 641 aaPredicted RBP9.35□□□□□ -0.91
EPHA3-201ENST00000336596 CHMP4CQ96CF2 233 aa9.35□□□□□ -0.91
EPHA3-201ENST00000336596 EVC2Q86UK5 1308 aa9.34□□□□□ -0.91
EPHA3-201ENST00000336596 KCNJ4P48050 445 aa9.34□□□□□ -0.91
EPHA3-201ENST00000336596 DAPK1P53355 1430 aa9.34□□□□□ -0.91
EPHA3-201ENST00000336596 CTTNBP2Q8WZ74 1663 aa9.34□□□□□ -0.91
EPHA3-201ENST00000336596 NOL10Q9BSC4 688 aaKnown RBP9.34□□□□□ -0.91
EPHA3-201ENST00000336596 AMOTL1Q8IY63 956 aa9.33□□□□□ -0.92
EPHA3-201ENST00000336596 NEUROD2Q15784 382 aa9.33□□□□□ -0.92
EPHA3-201ENST00000336596 L1TD1Q5T7N2 865 aaKnown RBP9.33□□□□□ -0.92
EPHA3-201ENST00000336596 PBRM1Q86U86 1689 aa9.33□□□□□ -0.92
EPHA3-201ENST00000336596 GPRASP1Q5JY77 1395 aa9.33□□□□□ -0.92
EPHA3-201ENST00000336596 ISY1Q9ULR0 285 aaKnown RBP9.32□□□□□ -0.92
EPHA3-201ENST00000336596 SENP3-EIF4A1A0A087X0R7 540 aa9.32□□□□□ -0.92
EPHA3-201ENST00000336596 MSH5O43196 834 aa9.32□□□□□ -0.92
EPHA3-201ENST00000336596 LRRFIP1Q32MZ4 808 aaKnown RBP9.32□□□□□ -0.92
EPHA3-201ENST00000336596 ADGRL1O94910 1474 aa9.32□□□□□ -0.92
EPHA3-201ENST00000336596 NUTM2FA1L443 756 aa9.32□□□□□ -0.92
EPHA3-201ENST00000336596 CCDC141Q6ZP82 1450 aa9.32□□□□□ -0.92
EPHA3-201ENST00000336596 RAPGEF6Q8TEU7 1601 aa9.32□□□□□ -0.92
EPHA3-201ENST00000336596 FKBP8Q14318 412 aa9.31□□□□□ -0.92
EPHA3-201ENST00000336596 COG3Q96JB2 828 aa9.31□□□□□ -0.92
EPHA3-201ENST00000336596 MAP3K1Q13233 1512 aa9.31□□□□□ -0.92
EPHA3-201ENST00000336596 GORABQ5T7V8 394 aa9.31□□□□□ -0.92
EPHA3-201ENST00000336596 UGGT2Q9NYU1 1516 aa9.31□□□□□ -0.92
EPHA3-201ENST00000336596 RALBP1Q15311 655 aa9.31□□□□□ -0.92
EPHA3-201ENST00000336596 CCDC34Q96HJ3 373 aa9.31□□□□□ -0.92
EPHA3-201ENST00000336596 CAMSAP2Q08AD1 1489 aa9.31□□□□□ -0.92
EPHA3-201ENST00000336596 ST20-MTHFSA0A0A6YYL1 179 aa9.3□□□□□ -0.92
EPHA3-201ENST00000336596 TTC5Q8N0Z6 440 aa9.3□□□□□ -0.92
EPHA3-201ENST00000336596 TRIM34Q9BYJ4 488 aa9.3□□□□□ -0.92
EPHA3-201ENST00000336596 NRDCO43847 1150 aa9.3□□□□□ -0.92
EPHA3-201ENST00000336596 SMC4Q9NTJ3 1288 aa9.3□□□□□ -0.92
EPHA3-201ENST00000336596 ABCA5Q8WWZ7 1642 aa9.3□□□□□ -0.92
EPHA3-201ENST00000336596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.3□□□□□ -0.92
EPHA3-201ENST00000336596 KIAA0556O60303 1618 aa9.29□□□□□ -0.92
EPHA3-201ENST00000336596 NUP160Q12769 1436 aa9.29□□□□□ -0.92
EPHA3-201ENST00000336596 HMMRO75330 724 aa9.29□□□□□ -0.92
EPHA3-201ENST00000336596 CTDP1Q9Y5B0 961 aaPredicted RBP9.29□□□□□ -0.92
EPHA3-201ENST00000336596 WDR97A6NE52 1622 aa9.29□□□□□ -0.92
EPHA3-201ENST00000336596 HFM1A2PYH4 1435 aa9.29□□□□□ -0.92
EPHA3-201ENST00000336596 ATP10BO94823 1461 aa9.29□□□□□ -0.92
EPHA3-201ENST00000336596 ASXL2Q76L83 1435 aa9.28□□□□□ -0.92
EPHA3-201ENST00000336596 CGNL1Q0VF96 1302 aa9.28□□□□□ -0.92
EPHA3-201ENST00000336596 FANCAO15360 1455 aa9.28□□□□□ -0.92
EPHA3-201ENST00000336596 THOC2Q8NI27 1593 aaKnown RBP9.28□□□□□ -0.92
EPHA3-201ENST00000336596 HTATSF1O43719 755 aaKnown RBP9.28□□□□□ -0.92
EPHA3-201ENST00000336596 PTPN23Q9H3S7 1636 aa9.28□□□□□ -0.92
EPHA3-201ENST00000336596 MINK1Q8N4C8 1332 aaPredicted RBP9.28□□□□□ -0.92
EPHA3-201ENST00000336596 SMG6Q86US8 1419 aaKnown RBP9.28□□□□□ -0.92
EPHA3-201ENST00000336596 ANKLE2Q86XL3 938 aa9.28□□□□□ -0.92
EPHA3-201ENST00000336596 ZNF330Q9Y3S2 320 aaPredicted RBP9.28□□□□□ -0.92
EPHA3-201ENST00000336596 CWC22Q9HCG8 908 aaKnown RBP9.27□□□□□ -0.92
EPHA3-201ENST00000336596 USP47Q96K76 1375 aa9.27□□□□□ -0.93
EPHA3-201ENST00000336596 ROCK1Q13464 1354 aa9.27□□□□□ -0.93
EPHA3-201ENST00000336596 TEX14Q8IWB6 1497 aa9.27□□□□□ -0.93
EPHA3-201ENST00000336596 DENND4BO75064 1496 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms