RNA–Protein interactions for RNA: ENST00000336314.8

LARP1-201, Transcript of La ribonucleoprotein domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LARP1, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP1-201ENST00000336314 SIN3AQ96ST3 1273 aa15.17■□□□□ 0.02
LARP1-201ENST00000336314 HSP90B1P14625 803 aaKnown RBP15.16■□□□□ 0.02
LARP1-201ENST00000336314 HDAC5Q9UQL6 1122 aa15.16■□□□□ 0.02
LARP1-201ENST00000336314 PDE3BQ13370 1112 aa15.16■□□□□ 0.02
LARP1-201ENST00000336314 TRIM44Q96DX7 344 aaPredicted RBP15.16■□□□□ 0.02
LARP1-201ENST00000336314 RAPGEF4Q8WZA2 1011 aa15.15■□□□□ 0.02
LARP1-201ENST00000336314 VGFO15240 615 aaPredicted RBP15.15■□□□□ 0.02
LARP1-201ENST00000336314 KIAA2012Q0VF49 1180 aa15.14■□□□□ 0.02
LARP1-201ENST00000336314 HSP90AB1P08238 724 aaKnown RBP15.14■□□□□ 0.01
LARP1-201ENST00000336314 RGS3P49796 1198 aa15.14■□□□□ 0.01
LARP1-201ENST00000336314 FAM177BA6PVY3 158 aa15.14■□□□□ 0.01
LARP1-201ENST00000336314 DHX16O60231 1041 aaKnown RBP15.13■□□□□ 0.01
LARP1-201ENST00000336314 RSPH4AQ5TD94 716 aa15.12■□□□□ 0.01
LARP1-201ENST00000336314 EIF2S2P20042 333 aaKnown RBP15.12■□□□□ 0.01
LARP1-201ENST00000336314 IPO8O15397 1037 aaKnown RBP15.11■□□□□ 0.01
LARP1-201ENST00000336314 RBM42Q9BTD8 480 aaKnown RBP15.11■□□□□ 0.01
LARP1-201ENST00000336314 TXNDC2Q86VQ3 553 aa15.11■□□□□ 0.01
LARP1-201ENST00000336314 FANCD2Q9BXW9 1451 aa15.11■□□□□ 0.01
LARP1-201ENST00000336314 ITPRIPQ8IWB1 547 aa15.09■□□□□ 0.01
LARP1-201ENST00000336314 FMN1Q68DA7 1419 aa15.09■□□□□ 0.01
LARP1-201ENST00000336314 CCDC18Q5T9S5 1454 aa15.09■□□□□ 0.01
LARP1-201ENST00000336314 LMOD3Q0VAK6 560 aa15.08■□□□□ 0.01
LARP1-201ENST00000336314 TRIM6-TRIM34B2RNG4 842 aa15.08■□□□□ 0.01
LARP1-201ENST00000336314 GPRASP1Q5JY77 1395 aa15.08■□□□□ 0
LARP1-201ENST00000336314 CHAF1AQ13111 956 aaPredicted RBP15.08■□□□□ 0
LARP1-201ENST00000336314 NEXNQ0ZGT2 675 aa15.07■□□□□ 0
LARP1-201ENST00000336314 SLC4A3P48751 1232 aa15.07■□□□□ 0
LARP1-201ENST00000336314 CREBRFQ8IUR6 639 aa15.06■□□□□ 0
LARP1-201ENST00000336314 NECTIN2Q92692 538 aa15.05■□□□□ 0
LARP1-201ENST00000336314 ANKLE2Q86XL3 938 aa15.05■□□□□ -0
LARP1-201ENST00000336314 PRDM2Q13029 1718 aa15.05■□□□□ -0
LARP1-201ENST00000336314 POGZQ7Z3K3 1410 aa15.05■□□□□ -0
LARP1-201ENST00000336314 THEMISQ8N1K5 641 aaPredicted RBP15.05■□□□□ -0
LARP1-201ENST00000336314 KTN1Q86UP2 1357 aaKnown RBP15.04■□□□□ -0
LARP1-201ENST00000336314 UACAQ9BZF9 1416 aa15.04■□□□□ -0
LARP1-201ENST00000336314 TOM1L2Q6ZVM7 507 aa15.04■□□□□ -0
LARP1-201ENST00000336314 ADAMTS2O95450 1211 aa15.04■□□□□ -0
LARP1-201ENST00000336314 C16orf71Q8IYS4 520 aaPredicted RBP15.04■□□□□ -0
LARP1-201ENST00000336314 CCDC43Q96MW1 224 aaKnown RBP15.04■□□□□ -0
LARP1-201ENST00000336314 FYB1O15117 783 aa15.03■□□□□ -0
LARP1-201ENST00000336314 EVC2Q86UK5 1308 aa15.03■□□□□ -0
LARP1-201ENST00000336314 NRDCO43847 1150 aa15.03■□□□□ -0
LARP1-201ENST00000336314 DNTTIP2Q5QJE6 756 aaKnown RBP15.02■□□□□ -0
LARP1-201ENST00000336314 IKQ13123 557 aaPredicted RBP15.02□□□□□ -0.01
LARP1-201ENST00000336314 L1TD1Q5T7N2 865 aaKnown RBP15.01□□□□□ -0.01
LARP1-201ENST00000336314 DDX54Q8TDD1 881 aaKnown RBP15.01□□□□□ -0.01
LARP1-201ENST00000336314 NOC3LQ8WTT2 800 aaKnown RBP15.01□□□□□ -0.01
LARP1-201ENST00000336314 AKAP17AQ02040 695 aaKnown RBP15.01□□□□□ -0.01
LARP1-201ENST00000336314 FHOD3Q2V2M9 1422 aa15□□□□□ -0.01
LARP1-201ENST00000336314 CCDC27Q2M243 656 aa15□□□□□ -0.01
LARP1-201ENST00000336314 ABTB2Q8N961 1025 aa15□□□□□ -0.01
LARP1-201ENST00000336314 CEP89Q96ST8 783 aa15□□□□□ -0.01
LARP1-201ENST00000336314 NGLY1Q96IV0 654 aa15□□□□□ -0.01
LARP1-201ENST00000336314 DMRT2Q9Y5R5 561 aa15□□□□□ -0.01
LARP1-201ENST00000336314 RBM5P52756 815 aaKnown RBP eCLIP15□□□□□ -0.013e-7■□□□□ 10.7
LARP1-201ENST00000336314 APPP05067 770 aa14.99□□□□□ -0.01
LARP1-201ENST00000336314 CCDC88BA6NC98 1476 aa14.99□□□□□ -0.01
LARP1-201ENST00000336314 GRM1Q13255 1194 aa14.99□□□□□ -0.01
LARP1-201ENST00000336314 MPHOSPH9Q99550 1183 aa14.99□□□□□ -0.01
LARP1-201ENST00000336314 PLIN1O60240 522 aa14.99□□□□□ -0.01
LARP1-201ENST00000336314 HMMRO75330 724 aa14.99□□□□□ -0.01
LARP1-201ENST00000336314 C9orf78Q9NZ63 289 aaPredicted RBP14.98□□□□□ -0.01
LARP1-201ENST00000336314 UBAP1LF5GYI3 381 aa14.98□□□□□ -0.01
LARP1-201ENST00000336314 B4GALNT3Q6L9W6 998 aa14.98□□□□□ -0.01
LARP1-201ENST00000336314 TCERG1O14776 1098 aaKnown RBP14.98□□□□□ -0.01
LARP1-201ENST00000336314 KIF6Q6ZMV9 814 aa14.98□□□□□ -0.01
LARP1-201ENST00000336314 SMC4Q9NTJ3 1288 aa14.98□□□□□ -0.01
LARP1-201ENST00000336314 FBXO3Q9UK99 471 aa14.98□□□□□ -0.01
LARP1-201ENST00000336314 WDHD1O75717 1129 aaPredicted RBP14.98□□□□□ -0.01
LARP1-201ENST00000336314 ABCC8Q09428 1581 aa14.97□□□□□ -0.01
LARP1-201ENST00000336314 ERICH6BQ5W0A0 696 aa14.97□□□□□ -0.01
LARP1-201ENST00000336314 CCDC146Q8IYE0 955 aa14.97□□□□□ -0.01
LARP1-201ENST00000336314 TNIKQ9UKE5 1360 aa14.97□□□□□ -0.01
LARP1-201ENST00000336314 NLRP6P59044 892 aa14.97□□□□□ -0.01
LARP1-201ENST00000336314 TTLL12Q14166 644 aaPredicted RBP14.97□□□□□ -0.01
LARP1-201ENST00000336314 TMEM132AQ24JP5 1023 aa14.96□□□□□ -0.01
LARP1-201ENST00000336314 DRC7Q8IY82 874 aa14.96□□□□□ -0.01
LARP1-201ENST00000336314 DDX58O95786 925 aaKnown RBP14.96□□□□□ -0.02
LARP1-201ENST00000336314 AIMP1Q12904 312 aaKnown RBP14.95□□□□□ -0.02
LARP1-201ENST00000336314 SYNE3Q6ZMZ3 975 aa14.95□□□□□ -0.02
LARP1-201ENST00000336314 MTMR7Q9Y216 660 aa14.95□□□□□ -0.02
LARP1-201ENST00000336314 ELL2O00472 640 aaPredicted RBP14.94□□□□□ -0.02
LARP1-201ENST00000336314 WWC2Q6AWC2 1192 aa14.94□□□□□ -0.02
LARP1-201ENST00000336314 PMFBP1Q8TBY8 1022 aa14.94□□□□□ -0.02
LARP1-201ENST00000336314 CCDC34Q96HJ3 373 aa14.94□□□□□ -0.02
LARP1-201ENST00000336314 IBSPP21815 317 aaPredicted RBP14.94□□□□□ -0.02
LARP1-201ENST00000336314 MYCNP04198 464 aaPredicted RBP14.93□□□□□ -0.02
LARP1-201ENST00000336314 RAPGEF2Q9Y4G8 1499 aa14.93□□□□□ -0.02
LARP1-201ENST00000336314 CCDC144AA2RUR9 1427 aa14.93□□□□□ -0.02
LARP1-201ENST00000336314 PRDM11Q9NQV5 511 aa14.92□□□□□ -0.02
LARP1-201ENST00000336314 XPCQ01831 940 aaPredicted RBP14.92□□□□□ -0.02
LARP1-201ENST00000336314 HSCBQ8IWL3 235 aa14.92□□□□□ -0.02
LARP1-201ENST00000336314 R3HCC1Q9Y3T6 440 aaKnown RBP14.92□□□□□ -0.02
LARP1-201ENST00000336314 RIC3Q7Z5B4 369 aa14.92□□□□□ -0.02
LARP1-201ENST00000336314 SPRYD3Q8NCJ5 442 aa14.92□□□□□ -0.02
LARP1-201ENST00000336314 BICDL1Q6ZP65 573 aa14.91□□□□□ -0.02
LARP1-201ENST00000336314 AQRO60306 1485 aaKnown RBP eCLIP14.91□□□□□ -0.023e-7■■■■□ 22.6
LARP1-201ENST00000336314 GLIPR1L2Q4G1C9 344 aa14.91□□□□□ -0.02
LARP1-201ENST00000336314 LRRFIP1Q32MZ4 808 aaKnown RBP14.9□□□□□ -0.02
LARP1-201ENST00000336314 HSPA5P11021 654 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms