RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 LMOD2Q6P5Q4 547 aa8.47□□□□□ -1.05
HMG20A-201ENST00000336216 CCDC146Q8IYE0 955 aa8.47□□□□□ -1.05
HMG20A-201ENST00000336216 TRAK1Q9UPV9 953 aa8.47□□□□□ -1.05
HMG20A-201ENST00000336216 AFAP1Q8N556 730 aa8.46□□□□□ -1.05
HMG20A-201ENST00000336216 SPAG9O60271 1321 aaKnown RBP8.46□□□□□ -1.05
HMG20A-201ENST00000336216 NUP153P49790 1475 aaKnown RBP8.46□□□□□ -1.05
HMG20A-201ENST00000336216 PTPRKQ15262 1439 aa8.46□□□□□ -1.06
HMG20A-201ENST00000336216 CHD1O14646 1710 aa8.45□□□□□ -1.06
HMG20A-201ENST00000336216 UACAQ9BZF9 1416 aa8.45□□□□□ -1.06
HMG20A-201ENST00000336216 CDCA8Q53HL2 280 aa8.45□□□□□ -1.06
HMG20A-201ENST00000336216 NUDCQ9Y266 331 aa8.45□□□□□ -1.06
HMG20A-201ENST00000336216 EXOC6Q8TAG9 804 aa8.44□□□□□ -1.06
HMG20A-201ENST00000336216 AKNAQ7Z591 1439 aa8.44□□□□□ -1.06
HMG20A-201ENST00000336216 PLIN1O60240 522 aa8.44□□□□□ -1.06
HMG20A-201ENST00000336216 PANK3Q9H999 370 aa8.44□□□□□ -1.06
HMG20A-201ENST00000336216 ZBED9Q6R2W3 1325 aa8.44□□□□□ -1.06
HMG20A-201ENST00000336216 A0A0G2JS52 829 aa8.44□□□□□ -1.06
HMG20A-201ENST00000336216 HSP90AA1P07900 732 aaKnown RBP8.44□□□□□ -1.06
HMG20A-201ENST00000336216 NBPF8Q3BBV2 869 aa8.44□□□□□ -1.06
HMG20A-201ENST00000336216 MORC1Q86VD1 984 aa8.43□□□□□ -1.06
HMG20A-201ENST00000336216 MAPKBP1O60336 1514 aa8.43□□□□□ -1.06
HMG20A-201ENST00000336216 C11orf95C9JLR9 678 aaPredicted RBP8.43□□□□□ -1.06
HMG20A-201ENST00000336216 WASHC2CQ9Y4E1 1318 aa8.42□□□□□ -1.06
HMG20A-201ENST00000336216 SKAP1Q86WV1 359 aa8.42□□□□□ -1.06
HMG20A-201ENST00000336216 CFAP53Q96M91 514 aa8.42□□□□□ -1.06
HMG20A-201ENST00000336216 RRP7AQ9Y3A4 280 aaKnown RBP8.42□□□□□ -1.06
HMG20A-201ENST00000336216 PTPN23Q9H3S7 1636 aa8.42□□□□□ -1.06
HMG20A-201ENST00000336216 NBPF1Q3BBV0 1214 aa8.41□□□□□ -1.06
HMG20A-201ENST00000336216 PDE4AP27815 886 aa8.41□□□□□ -1.06
HMG20A-201ENST00000336216 CLUAP1Q96AJ1 413 aa8.41□□□□□ -1.06
HMG20A-201ENST00000336216 U2AF1L5P0DN76 240 aaPredicted RBP8.4□□□□□ -1.06
HMG20A-201ENST00000336216 U2AF1Q01081 240 aaKnown RBP eCLIP8.4□□□□□ -1.06
HMG20A-201ENST00000336216 KIF14Q15058 1648 aa8.4□□□□□ -1.06
HMG20A-201ENST00000336216 KIF7Q2M1P5 1343 aa8.4□□□□□ -1.06
HMG20A-201ENST00000336216 RCAN3Q9UKA8 241 aa8.4□□□□□ -1.06
HMG20A-201ENST00000336216 UPF2Q9HAU5 1272 aaKnown RBP8.4□□□□□ -1.07
HMG20A-201ENST00000336216 BRPF3Q9ULD4 1205 aa8.4□□□□□ -1.07
HMG20A-201ENST00000336216 ATP10BO94823 1461 aa8.4□□□□□ -1.07
HMG20A-201ENST00000336216 KANK1Q14678 1352 aa8.39□□□□□ -1.07
HMG20A-201ENST00000336216 USP47Q96K76 1375 aa8.39□□□□□ -1.07
HMG20A-201ENST00000336216 RSPH4AQ5TD94 716 aa8.39□□□□□ -1.07
HMG20A-201ENST00000336216 FTSJ3Q8IY81 847 aaKnown RBP8.39□□□□□ -1.07
HMG20A-201ENST00000336216 ABCA8O94911 1581 aa8.39□□□□□ -1.07
HMG20A-201ENST00000336216 KTN1Q86UP2 1357 aaKnown RBP8.39□□□□□ -1.07
HMG20A-201ENST00000336216 MAPK8IP3Q9UPT6 1336 aa8.39□□□□□ -1.07
HMG20A-201ENST00000336216 HFM1A2PYH4 1435 aa8.39□□□□□ -1.07
HMG20A-201ENST00000336216 BCL2L13Q9BXK5 485 aa8.38□□□□□ -1.07
HMG20A-201ENST00000336216 TMEM132EQ6IEE7 984 aa8.38□□□□□ -1.07
HMG20A-201ENST00000336216 TCOF1Q13428 1488 aaKnown RBP8.38□□□□□ -1.07
HMG20A-201ENST00000336216 DDRGK1Q96HY6 314 aa8.38□□□□□ -1.07
HMG20A-201ENST00000336216 ARHGEF11O15085 1522 aa8.38□□□□□ -1.07
HMG20A-201ENST00000336216 ITSN2Q9NZM3 1697 aa8.38□□□□□ -1.07
HMG20A-201ENST00000336216 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.38□□□□□ -1.07
HMG20A-201ENST00000336216 CCDC7Q96M83 1385 aa8.37□□□□□ -1.07
HMG20A-201ENST00000336216 CCDC144AA2RUR9 1427 aa8.37□□□□□ -1.07
HMG20A-201ENST00000336216 NLRP13Q86W25 1043 aa8.37□□□□□ -1.07
HMG20A-201ENST00000336216 KIF15Q9NS87 1388 aa8.37□□□□□ -1.07
HMG20A-201ENST00000336216 ABCC2Q92887 1545 aa8.37□□□□□ -1.07
HMG20A-201ENST00000336216 TCERG1O14776 1098 aaKnown RBP8.37□□□□□ -1.07
HMG20A-201ENST00000336216 NAIPQ13075 1403 aa8.36□□□□□ -1.07
HMG20A-201ENST00000336216 SPRYD3Q8NCJ5 442 aa8.36□□□□□ -1.07
HMG20A-201ENST00000336216 KDM6BO15054 1643 aa8.36□□□□□ -1.07
HMG20A-201ENST00000336216 APBB1O00213 710 aa8.36□□□□□ -1.07
HMG20A-201ENST00000336216 TPRNQ4KMQ1 711 aa8.36□□□□□ -1.07
HMG20A-201ENST00000336216 DAPK1P53355 1430 aa8.36□□□□□ -1.07
HMG20A-201ENST00000336216 CNTLNQ9NXG0 1405 aa8.35□□□□□ -1.07
HMG20A-201ENST00000336216 ELL2O00472 640 aaPredicted RBP8.35□□□□□ -1.07
HMG20A-201ENST00000336216 RALBP1Q15311 655 aa8.35□□□□□ -1.07
HMG20A-201ENST00000336216 SHROOM2Q13796 1616 aa8.35□□□□□ -1.07
HMG20A-201ENST00000336216 ROCK1Q13464 1354 aa8.35□□□□□ -1.07
HMG20A-201ENST00000336216 CLASP1Q7Z460 1538 aa8.35□□□□□ -1.07
HMG20A-201ENST00000336216 GPATCH8Q9UKJ3 1502 aaKnown RBP8.35□□□□□ -1.07
HMG20A-201ENST00000336216 RRP1P56182 461 aaKnown RBP8.35□□□□□ -1.07
HMG20A-201ENST00000336216 SLKQ9H2G2 1235 aaPredicted RBP8.35□□□□□ -1.07
HMG20A-201ENST00000336216 ANKRD50Q9ULJ7 1429 aa8.35□□□□□ -1.07
HMG20A-201ENST00000336216 CAMSAP2Q08AD1 1489 aa8.35□□□□□ -1.07
HMG20A-201ENST00000336216 CDCA7LQ96GN5 454 aa8.34□□□□□ -1.07
HMG20A-201ENST00000336216 PLEKHH2Q8IVE3 1493 aa8.34□□□□□ -1.07
HMG20A-201ENST00000336216 APAF1O14727 1248 aa8.34□□□□□ -1.07
HMG20A-201ENST00000336216 CFAP70Q5T0N1 1121 aa8.34□□□□□ -1.07
HMG20A-201ENST00000336216 MINK1Q8N4C8 1332 aaPredicted RBP8.33□□□□□ -1.08
HMG20A-201ENST00000336216 ARHGAP5Q13017 1502 aa8.33□□□□□ -1.08
HMG20A-201ENST00000336216 GSE1Q14687 1217 aa8.33□□□□□ -1.08
HMG20A-201ENST00000336216 ERCC6L2Q5T890 1561 aa8.33□□□□□ -1.08
HMG20A-201ENST00000336216 CRBNQ96SW2 442 aa8.33□□□□□ -1.08
HMG20A-201ENST00000336216 UHRF1BP1LA0JNW5 1464 aa8.32□□□□□ -1.08
HMG20A-201ENST00000336216 ABCC5O15440 1437 aa8.32□□□□□ -1.08
HMG20A-201ENST00000336216 RAPGEF3O95398 923 aa8.31□□□□□ -1.08
HMG20A-201ENST00000336216 NFKBIBQ15653 356 aa8.31□□□□□ -1.08
HMG20A-201ENST00000336216 GZF1Q9H116 711 aaPredicted RBP8.31□□□□□ -1.08
HMG20A-201ENST00000336216 ADCY10Q96PN6 1610 aa8.31□□□□□ -1.08
HMG20A-201ENST00000336216 GOLGA2Q08379 1002 aa8.31□□□□□ -1.08
HMG20A-201ENST00000336216 NAP1L5Q96NT1 182 aaPredicted RBP8.31□□□□□ -1.08
HMG20A-201ENST00000336216 MYH16Q9H6N6 1097 aa8.31□□□□□ -1.08
HMG20A-201ENST00000336216 MYBBP1AQ9BQG0 1328 aaKnown RBP8.3□□□□□ -1.08
HMG20A-201ENST00000336216 C9orf84Q5VXU9 1444 aa8.3□□□□□ -1.08
HMG20A-201ENST00000336216 DNMT1P26358 1616 aaKnown RBP8.3□□□□□ -1.08
HMG20A-201ENST00000336216 FAM69CQ0P6D2 419 aa8.3□□□□□ -1.08
HMG20A-201ENST00000336216 LTV1Q96GA3 475 aaPredicted RBP8.3□□□□□ -1.08
HMG20A-201ENST00000336216 CCDC141Q6ZP82 1450 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms