RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 SMG6Q86US8 1419 aaKnown RBP18.44■□□□□ 0.54
RC3H2-201ENST00000335387 EIF2AK4Q9P2K8 1649 aaKnown RBP18.44■□□□□ 0.54
RC3H2-201ENST00000335387 KIF15Q9NS87 1388 aa18.43■□□□□ 0.54
RC3H2-201ENST00000335387 PKD2Q13563 968 aa18.43■□□□□ 0.54
RC3H2-201ENST00000335387 ZMYM4Q5VZL5 1548 aa18.43■□□□□ 0.54
RC3H2-201ENST00000335387 GPRASP1Q5JY77 1395 aa18.42■□□□□ 0.54
RC3H2-201ENST00000335387 PRDM15P57071 1507 aaPredicted RBP18.42■□□□□ 0.54
RC3H2-201ENST00000335387 RNF123Q5XPI4 1314 aa18.41■□□□□ 0.54
RC3H2-201ENST00000335387 NUP155O75694 1391 aa18.4■□□□□ 0.54
RC3H2-201ENST00000335387 ARAP3Q8WWN8 1544 aa18.4■□□□□ 0.54
RC3H2-201ENST00000335387 SYCP2Q9BX26 1530 aa18.39■□□□□ 0.54
RC3H2-201ENST00000335387 UHRF1BP1LA0JNW5 1464 aa18.39■□□□□ 0.54
RC3H2-201ENST00000335387 DUOX2Q9NRD8 1548 aa18.38■□□□□ 0.53
RC3H2-201ENST00000335387 PRAG1Q86YV5 1406 aa18.38■□□□□ 0.53
RC3H2-201ENST00000335387 LRPPRCP42704 1394 aaKnown RBP18.38■□□□□ 0.53
RC3H2-201ENST00000335387 ERCC6L2Q5T890 1561 aa18.38■□□□□ 0.53
RC3H2-201ENST00000335387 INSRP06213 1382 aa18.37■□□□□ 0.53
RC3H2-201ENST00000335387 PLA2R1Q13018 1463 aa18.37■□□□□ 0.53
RC3H2-201ENST00000335387 BCANQ96GW7 911 aa18.37■□□□□ 0.53
RC3H2-201ENST00000335387 ERBINQ96RT1 1412 aa18.36■□□□□ 0.53
RC3H2-201ENST00000335387 NEURL4Q96JN8 1562 aa18.36■□□□□ 0.53
RC3H2-201ENST00000335387 RBM19Q9Y4C8 960 aaKnown RBP18.36■□□□□ 0.53
RC3H2-201ENST00000335387 ANP32EQ9BTT0 268 aa18.36■□□□□ 0.53
RC3H2-201ENST00000335387 DEPDC5O75140 1603 aa18.35■□□□□ 0.53
RC3H2-201ENST00000335387 MRS2Q9HD23 443 aa18.34■□□□□ 0.53
RC3H2-201ENST00000335387 PPP4R2Q9NY27 417 aa18.34■□□□□ 0.53
RC3H2-201ENST00000335387 ZCCHC11Q5TAX3 1644 aaKnown RBP18.33■□□□□ 0.53
RC3H2-201ENST00000335387 ABCC1P33527 1531 aa18.33■□□□□ 0.52
RC3H2-201ENST00000335387 FANCIQ9NVI1 1328 aa18.33■□□□□ 0.52
RC3H2-201ENST00000335387 TSPY4P0CV99 314 aa18.31■□□□□ 0.52
RC3H2-201ENST00000335387 TSPY10P0CW01 314 aa18.31■□□□□ 0.52
RC3H2-201ENST00000335387 BRD4O60885 1362 aaPredicted RBP18.31■□□□□ 0.52
RC3H2-201ENST00000335387 A2MP01023 1474 aa18.31■□□□□ 0.52
RC3H2-201ENST00000335387 ARHGAP5Q13017 1502 aa18.31■□□□□ 0.52
RC3H2-201ENST00000335387 COL17A1Q9UMD9 1497 aaPredicted RBP18.3■□□□□ 0.52
RC3H2-201ENST00000335387 CEP152O94986 1710 aa18.3■□□□□ 0.52
RC3H2-201ENST00000335387 IQGAP1P46940 1657 aa18.3■□□□□ 0.52
RC3H2-201ENST00000335387 ZNF777Q9ULD5 760 aaPredicted RBP18.29■□□□□ 0.52
RC3H2-201ENST00000335387 SPHKAPQ2M3C7 1700 aa18.28■□□□□ 0.52
RC3H2-201ENST00000335387 KIAA1210Q9ULL0 1709 aa18.27■□□□□ 0.52
RC3H2-201ENST00000335387 PLCH2O75038 1416 aa18.26■□□□□ 0.51
RC3H2-201ENST00000335387 PARD3Q8TEW0 1356 aa18.26■□□□□ 0.51
RC3H2-201ENST00000335387 PNISRQ8TF01 805 aaKnown RBP18.26■□□□□ 0.51
RC3H2-201ENST00000335387 CCDC144AA2RUR9 1427 aa18.26■□□□□ 0.51
RC3H2-201ENST00000335387 KIF13AQ9H1H9 1805 aa18.26■□□□□ 0.51
RC3H2-201ENST00000335387 MADDQ8WXG6 1647 aa18.25■□□□□ 0.51
RC3H2-201ENST00000335387 VWDEQ8N2E2 1590 aa18.25■□□□□ 0.51
RC3H2-201ENST00000335387 RALBP1Q15311 655 aa18.24■□□□□ 0.51
RC3H2-201ENST00000335387 RTEL1-TNFRSF6BF6WH68 1400 aa18.24■□□□□ 0.51
RC3H2-201ENST00000335387 WASHC2CQ9Y4E1 1318 aa18.24■□□□□ 0.51
RC3H2-201ENST00000335387 HNRNPMP52272 730 aaKnown RBP eCLIP18.24■□□□□ 0.51
RC3H2-201ENST00000335387 TRPM2O94759 1503 aa18.23■□□□□ 0.51
RC3H2-201ENST00000335387 NUDCQ9Y266 331 aa18.22■□□□□ 0.51
RC3H2-201ENST00000335387 GLI2P10070 1586 aa18.22■□□□□ 0.51
RC3H2-201ENST00000335387 ABCA9Q8IUA7 1624 aa18.22■□□□□ 0.51
RC3H2-201ENST00000335387 FAM9BQ8IZU0 186 aa18.21■□□□□ 0.51
RC3H2-201ENST00000335387 CARD11Q9BXL7 1154 aa18.21■□□□□ 0.51
RC3H2-201ENST00000335387 MYBBP1AQ9BQG0 1328 aaKnown RBP18.21■□□□□ 0.51
RC3H2-201ENST00000335387 INO80Q9ULG1 1556 aaPredicted RBP18.21■□□□□ 0.51
RC3H2-201ENST00000335387 TET3O43151 1660 aa18.21■□□□□ 0.51
RC3H2-201ENST00000335387 ZFYVE16Q7Z3T8 1539 aa18.21■□□□□ 0.51
RC3H2-201ENST00000335387 WDR7Q9Y4E6 1490 aa18.2■□□□□ 0.5
RC3H2-201ENST00000335387 TRHP20396 242 aaPredicted RBP18.19■□□□□ 0.5
RC3H2-201ENST00000335387 PTPRTO14522 1441 aa18.18■□□□□ 0.5
RC3H2-201ENST00000335387 DIP2BQ9P265 1576 aa18.18■□□□□ 0.5
RC3H2-201ENST00000335387 NPM1P06748 294 aaKnown RBP eCLIP18.17■□□□□ 0.5
RC3H2-201ENST00000335387 BLMP54132 1417 aaPredicted RBP18.17■□□□□ 0.5
RC3H2-201ENST00000335387 ST20-MTHFSA0A0A6YYL1 179 aa18.16■□□□□ 0.5
RC3H2-201ENST00000335387 IFT172Q9UG01 1749 aa18.16■□□□□ 0.5
RC3H2-201ENST00000335387 SCAPERQ9BY12 1400 aa18.15■□□□□ 0.5
RC3H2-201ENST00000335387 SYNMO15061 1565 aa18.15■□□□□ 0.5
RC3H2-201ENST00000335387 PER1O15534 1290 aaPredicted RBP18.14■□□□□ 0.5
RC3H2-201ENST00000335387 MYOM1P52179 1685 aa18.13■□□□□ 0.49
RC3H2-201ENST00000335387 DCAF11Q8TEB1 546 aa18.13■□□□□ 0.49
RC3H2-201ENST00000335387 TESK2Q96S53 571 aa18.12■□□□□ 0.49
RC3H2-201ENST00000335387 STAC3Q96MF2 364 aa18.12■□□□□ 0.49
RC3H2-201ENST00000335387 CLTCL1P53675 1640 aa18.12■□□□□ 0.49
RC3H2-201ENST00000335387 MROH1Q8NDA8 1641 aa18.11■□□□□ 0.49
RC3H2-201ENST00000335387 MSH5O43196 834 aa18.1■□□□□ 0.49
RC3H2-201ENST00000335387 MYO3AQ8NEV4 1616 aa18.09■□□□□ 0.49
RC3H2-201ENST00000335387 IRX6P78412 446 aaPredicted RBP18.08■□□□□ 0.49
RC3H2-201ENST00000335387 PDE3BQ13370 1112 aa18.08■□□□□ 0.48
RC3H2-201ENST00000335387 NLRP13Q86W25 1043 aa18.08■□□□□ 0.48
RC3H2-201ENST00000335387 TRAPPC8Q9Y2L5 1435 aa18.07■□□□□ 0.48
RC3H2-201ENST00000335387 DISP3Q9P2K9 1392 aa18.07■□□□□ 0.48
RC3H2-201ENST00000335387 ZNF326Q5BKZ1 582 aaKnown RBP18.06■□□□□ 0.48
RC3H2-201ENST00000335387 MYOM2P54296 1465 aa18.05■□□□□ 0.48
RC3H2-201ENST00000335387 ATP7AQ04656 1500 aa18.05■□□□□ 0.48
RC3H2-201ENST00000335387 LMTK2Q8IWU2 1503 aa18.05■□□□□ 0.48
RC3H2-201ENST00000335387 TMC1Q8TDI8 760 aa18.05■□□□□ 0.48
RC3H2-201ENST00000335387 NPC1L1Q9UHC9 1359 aa18.03■□□□□ 0.48
RC3H2-201ENST00000335387 MAP3K4Q9Y6R4 1608 aa18.02■□□□□ 0.48
RC3H2-201ENST00000335387 NRXN1Q9ULB1 1477 aa18.02■□□□□ 0.48
RC3H2-201ENST00000335387 EFCAB2Q5VUJ9 269 aa18.02■□□□□ 0.47
RC3H2-201ENST00000335387 SCAF11Q99590 1463 aaKnown RBP18.01■□□□□ 0.47
RC3H2-201ENST00000335387 KDM5AP29375 1690 aaKnown RBP18.01■□□□□ 0.47
RC3H2-201ENST00000335387 NBPF1Q3BBV0 1214 aa18■□□□□ 0.47
RC3H2-201ENST00000335387 KDM2AQ9Y2K7 1162 aa18■□□□□ 0.47
RC3H2-201ENST00000335387 KIF1BO60333 1816 aa18■□□□□ 0.47
RC3H2-201ENST00000335387 B4GALNT3Q6L9W6 998 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms