RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 IPO9Q96P70 1041 aaKnown RBP27.79■■■□□ 2.04
SPNS1-203ENST00000334536 DHX29Q7Z478 1369 aaKnown RBP27.78■■■□□ 2.04
SPNS1-203ENST00000334536 ROCK2O75116 1388 aaKnown RBP27.77■■■□□ 2.04
SPNS1-203ENST00000334536 BCORL1Q5H9F3 1711 aa27.77■■■□□ 2.04
SPNS1-203ENST00000334536 ERCC6L2Q5T890 1561 aa27.76■■■□□ 2.04
SPNS1-203ENST00000334536 SAMD9LQ8IVG5 1584 aa27.76■■■□□ 2.03
SPNS1-203ENST00000334536 HNRNPMP52272 730 aaKnown RBP eCLIP27.75■■■□□ 2.03
SPNS1-203ENST00000334536 ANP32AP39687 249 aaKnown RBP27.75■■■□□ 2.03
SPNS1-203ENST00000334536 FAM9BQ8IZU0 186 aa27.74■■■□□ 2.03
SPNS1-203ENST00000334536 CDC42BPBQ9Y5S2 1711 aa27.73■■■□□ 2.03
SPNS1-203ENST00000334536 WASHC2CQ9Y4E1 1318 aa27.73■■■□□ 2.03
SPNS1-203ENST00000334536 ZNF326Q5BKZ1 582 aaKnown RBP27.72■■■□□ 2.03
SPNS1-203ENST00000334536 MAST1Q9Y2H9 1570 aa27.71■■■□□ 2.03
SPNS1-203ENST00000334536 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.7■■■□□ 2.03
SPNS1-203ENST00000334536 ZBTB47Q9UFB7 747 aaPredicted RBP27.67■■■□□ 2.02
SPNS1-203ENST00000334536 FAM135AQ9P2D6 1515 aa27.67■■■□□ 2.02
SPNS1-203ENST00000334536 CARD11Q9BXL7 1154 aa27.67■■■□□ 2.02
SPNS1-203ENST00000334536 PKNOX2Q96KN3 472 aa27.65■■■□□ 2.02
SPNS1-203ENST00000334536 EIF5BO60841 1220 aaKnown RBP27.64■■■□□ 2.02
SPNS1-203ENST00000334536 PLEKHH2Q8IVE3 1493 aa27.64■■■□□ 2.01
SPNS1-203ENST00000334536 UNC13BO14795 1591 aa27.62■■■□□ 2.01
SPNS1-203ENST00000334536 KTN1Q86UP2 1357 aaKnown RBP27.59■■■□□ 2.01
SPNS1-203ENST00000334536 RTN4Q9NQC3 1192 aaKnown RBP27.59■■■□□ 2.01
SPNS1-203ENST00000334536 ARHGAP5Q13017 1502 aa27.59■■■□□ 2.01
SPNS1-203ENST00000334536 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.59■■■□□ 2.013e-6■■□□□ 13.1
SPNS1-203ENST00000334536 SYCP2Q9BX26 1530 aa27.59■■■□□ 2.01
SPNS1-203ENST00000334536 ABCC2Q92887 1545 aa27.58■■■□□ 2.01
SPNS1-203ENST00000334536 PLXNC1O60486 1568 aa27.58■■■□□ 2.01
SPNS1-203ENST00000334536 TTC37Q6PGP7 1564 aa27.58■■■□□ 2.01
SPNS1-203ENST00000334536 DCAF11Q8TEB1 546 aa27.58■■■□□ 2.01
SPNS1-203ENST00000334536 IRX6P78412 446 aaPredicted RBP27.57■■■□□ 2
SPNS1-203ENST00000334536 POLR3GLQ9BT43 218 aa27.56■■■□□ 2
SPNS1-203ENST00000334536 SMG6Q86US8 1419 aaKnown RBP27.55■■■□□ 2
SPNS1-203ENST00000334536 OSCARQ8IYS5 282 aa27.55■■■□□ 2
SPNS1-203ENST00000334536 CCDC144AA2RUR9 1427 aa27.55■■■□□ 2
SPNS1-203ENST00000334536 KDM2AQ9Y2K7 1162 aa27.55■■■□□ 2
SPNS1-203ENST00000334536 RSPH6AQ9H0K4 717 aa27.53■■■□□ 2
SPNS1-203ENST00000334536 MYO5CQ9NQX4 1742 aa27.53■■■□□ 2
SPNS1-203ENST00000334536 PRAG1Q86YV5 1406 aa27.53■■■□□ 2
SPNS1-203ENST00000334536 ST20-MTHFSA0A0A6YYL1 179 aa27.52■■■□□ 2
SPNS1-203ENST00000334536 IQGAP3Q86VI3 1631 aa27.51■■□□□ 1.99
SPNS1-203ENST00000334536 TRPM1Q7Z4N2 1603 aa27.5■■□□□ 1.99
SPNS1-203ENST00000334536 DUOX2Q9NRD8 1548 aa27.49■■□□□ 1.99
SPNS1-203ENST00000334536 E9PCH4 1651 aa27.49■■□□□ 1.99
SPNS1-203ENST00000334536 RALBP1Q15311 655 aa27.48■■□□□ 1.99
SPNS1-203ENST00000334536 PNISRQ8TF01 805 aaKnown RBP27.48■■□□□ 1.99
SPNS1-203ENST00000334536 GPRASP1Q5JY77 1395 aa27.48■■□□□ 1.99
SPNS1-203ENST00000334536 PLA2R1Q13018 1463 aa27.47■■□□□ 1.99
SPNS1-203ENST00000334536 LAMC1P11047 1609 aa27.47■■□□□ 1.99
SPNS1-203ENST00000334536 BRD4O60885 1362 aaPredicted RBP27.46■■□□□ 1.99
SPNS1-203ENST00000334536 ATP10AO60312 1499 aa27.46■■□□□ 1.99
SPNS1-203ENST00000334536 B4GALNT3Q6L9W6 998 aa27.46■■□□□ 1.99
SPNS1-203ENST00000334536 MAGI2Q86UL8 1455 aa27.45■■□□□ 1.99
SPNS1-203ENST00000334536 ERBINQ96RT1 1412 aa27.45■■□□□ 1.99
SPNS1-203ENST00000334536 PPM1GO15355 546 aaPredicted RBP27.45■■□□□ 1.99
SPNS1-203ENST00000334536 TMC1Q8TDI8 760 aa27.45■■□□□ 1.98
SPNS1-203ENST00000334536 NUDCQ9Y266 331 aa27.45■■□□□ 1.98
SPNS1-203ENST00000334536 GLIPR1L2Q4G1C9 344 aa27.44■■□□□ 1.98
SPNS1-203ENST00000334536 MYBBP1AQ9BQG0 1328 aaKnown RBP27.43■■□□□ 1.98
SPNS1-203ENST00000334536 UHRF1BP1LA0JNW5 1464 aa27.43■■□□□ 1.98
SPNS1-203ENST00000334536 PLCH2O75038 1416 aa27.43■■□□□ 1.98
SPNS1-203ENST00000334536 A2MP01023 1474 aa27.41■■□□□ 1.98
SPNS1-203ENST00000334536 LRPPRCP42704 1394 aaKnown RBP27.41■■□□□ 1.98
SPNS1-203ENST00000334536 RNF123Q5XPI4 1314 aa27.4■■□□□ 1.98
SPNS1-203ENST00000334536 EIF2AK4Q9P2K8 1649 aaKnown RBP27.4■■□□□ 1.98
SPNS1-203ENST00000334536 EFCAB2Q5VUJ9 269 aa27.38■■□□□ 1.97
SPNS1-203ENST00000334536 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.36■■□□□ 1.97
SPNS1-203ENST00000334536 PRDM15P57071 1507 aaPredicted RBP27.36■■□□□ 1.97
SPNS1-203ENST00000334536 NEFMP07197 916 aa27.35■■□□□ 1.97
SPNS1-203ENST00000334536 ZCCHC11Q5TAX3 1644 aaKnown RBP27.35■■□□□ 1.97
SPNS1-203ENST00000334536 CNGB1Q14028 1251 aaPredicted RBP27.33■■□□□ 1.97
SPNS1-203ENST00000334536 ABCC1P33527 1531 aa27.33■■□□□ 1.97
SPNS1-203ENST00000334536 COL17A1Q9UMD9 1497 aaPredicted RBP27.32■■□□□ 1.96
SPNS1-203ENST00000334536 RGL3Q3MIN7 710 aa27.32■■□□□ 1.96
SPNS1-203ENST00000334536 PARD3Q8TEW0 1356 aa27.31■■□□□ 1.96
SPNS1-203ENST00000334536 NBPF1Q3BBV0 1214 aa27.3■■□□□ 1.96
SPNS1-203ENST00000334536 ARAP3Q8WWN8 1544 aa27.3■■□□□ 1.96
SPNS1-203ENST00000334536 NLRP13Q86W25 1043 aa27.28■■□□□ 1.96
SPNS1-203ENST00000334536 RTEL1-TNFRSF6BF6WH68 1400 aa27.28■■□□□ 1.96
SPNS1-203ENST00000334536 FAM43AQ8N2R8 423 aa27.27■■□□□ 1.96
SPNS1-203ENST00000334536 GSE1Q14687 1217 aa27.26■■□□□ 1.95
SPNS1-203ENST00000334536 PER1O15534 1290 aaPredicted RBP27.25■■□□□ 1.95
SPNS1-203ENST00000334536 TESK2Q96S53 571 aa27.25■■□□□ 1.95
SPNS1-203ENST00000334536 INSRP06213 1382 aa27.24■■□□□ 1.95
SPNS1-203ENST00000334536 TRAPPC8Q9Y2L5 1435 aa27.23■■□□□ 1.95
SPNS1-203ENST00000334536 RNF17Q9BXT8 1623 aaKnown RBP27.23■■□□□ 1.95
SPNS1-203ENST00000334536 STAC3Q96MF2 364 aa27.22■■□□□ 1.95
SPNS1-203ENST00000334536 BRPF3Q9ULD4 1205 aa27.22■■□□□ 1.95
SPNS1-203ENST00000334536 TMF1P82094 1093 aa27.2■■□□□ 1.94
SPNS1-203ENST00000334536 ZMYM4Q5VZL5 1548 aa27.2■■□□□ 1.94
SPNS1-203ENST00000334536 DISP3Q9P2K9 1392 aa27.18■■□□□ 1.94
SPNS1-203ENST00000334536 PDE3BQ13370 1112 aa27.18■■□□□ 1.94
SPNS1-203ENST00000334536 SPAG9O60271 1321 aaKnown RBP27.18■■□□□ 1.94
SPNS1-203ENST00000334536 TRPM2O94759 1503 aa27.16■■□□□ 1.94
SPNS1-203ENST00000334536 ZFYVE16Q7Z3T8 1539 aa27.15■■□□□ 1.94
SPNS1-203ENST00000334536 PTPRTO14522 1441 aa27.14■■□□□ 1.94
SPNS1-203ENST00000334536 DEPDC5O75140 1603 aa27.13■■□□□ 1.93
SPNS1-203ENST00000334536 MADDQ8WXG6 1647 aa27.12■■□□□ 1.93
SPNS1-203ENST00000334536 TCERG1O14776 1098 aaKnown RBP27.11■■□□□ 1.93
SPNS1-203ENST00000334536 PANK3Q9H999 370 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms