RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 CD109Q6YHK3 1445 aa14.52□□□□□ -0.09
POLR1B-202ENST00000333990 PLB1Q6P1J6 1458 aa14.51□□□□□ -0.09
POLR1B-202ENST00000333990 USP47Q96K76 1375 aa14.51□□□□□ -0.09
POLR1B-202ENST00000333990 SLC52A1Q9NWF4 448 aa14.51□□□□□ -0.09
POLR1B-202ENST00000333990 CDK13Q14004 1512 aaKnown RBP14.5□□□□□ -0.09
POLR1B-202ENST00000333990 IRX6P78412 446 aaPredicted RBP14.5□□□□□ -0.09
POLR1B-202ENST00000333990 SENP3-EIF4A1A0A087X0R7 540 aa14.5□□□□□ -0.09
POLR1B-202ENST00000333990 RAPGEF3O95398 923 aa14.5□□□□□ -0.09
POLR1B-202ENST00000333990 AMPHP49418 695 aa14.5□□□□□ -0.09
POLR1B-202ENST00000333990 FRAT1Q92837 279 aaPredicted RBP14.49□□□□□ -0.09
POLR1B-202ENST00000333990 NUTM2FA1L443 756 aa14.49□□□□□ -0.09
POLR1B-202ENST00000333990 NPHP1O15259 732 aa14.49□□□□□ -0.09
POLR1B-202ENST00000333990 CGNL1Q0VF96 1302 aa14.48□□□□□ -0.09
POLR1B-202ENST00000333990 AEBP2Q6ZN18 517 aaPredicted RBP14.48□□□□□ -0.09
POLR1B-202ENST00000333990 MINK1Q8N4C8 1332 aaPredicted RBP14.48□□□□□ -0.09
POLR1B-202ENST00000333990 CENPJQ9HC77 1338 aaPredicted RBP14.48□□□□□ -0.09
POLR1B-202ENST00000333990 MAP3K1Q13233 1512 aa14.48□□□□□ -0.09
POLR1B-202ENST00000333990 THEMISQ8N1K5 641 aaPredicted RBP14.48□□□□□ -0.09
POLR1B-202ENST00000333990 SUPT16HQ9Y5B9 1047 aaKnown RBP14.47□□□□□ -0.09
POLR1B-202ENST00000333990 DAPK1P53355 1430 aa14.47□□□□□ -0.09
POLR1B-202ENST00000333990 LMOD3Q0VAK6 560 aa14.46□□□□□ -0.09
POLR1B-202ENST00000333990 COG3Q96JB2 828 aa14.46□□□□□ -0.09
POLR1B-202ENST00000333990 CCDC141Q6ZP82 1450 aa14.46□□□□□ -0.1
POLR1B-202ENST00000333990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.45□□□□□ -0.1
POLR1B-202ENST00000333990 PANK3Q9H999 370 aa14.45□□□□□ -0.1
POLR1B-202ENST00000333990 PCF11O94913 1555 aaKnown RBP14.45□□□□□ -0.1
POLR1B-202ENST00000333990 KIF14Q15058 1648 aa14.44□□□□□ -0.1
POLR1B-202ENST00000333990 ROCK1Q13464 1354 aa14.44□□□□□ -0.1
POLR1B-202ENST00000333990 ARHGEF11O15085 1522 aa14.44□□□□□ -0.1
POLR1B-202ENST00000333990 IPO8O15397 1037 aaKnown RBP14.44□□□□□ -0.1
POLR1B-202ENST00000333990 TXNDC2Q86VQ3 553 aa14.43□□□□□ -0.1
POLR1B-202ENST00000333990 KIAA1107Q9UPP5 1409 aa14.43□□□□□ -0.1
POLR1B-202ENST00000333990 CCDC9Q9Y3X0 531 aaKnown RBP14.43□□□□□ -0.1
POLR1B-202ENST00000333990 CASC1Q6TDU7 716 aa14.41□□□□□ -0.1
POLR1B-202ENST00000333990 ADGRL1O94910 1474 aa14.41□□□□□ -0.1
POLR1B-202ENST00000333990 MYBBP1AQ9BQG0 1328 aaKnown RBP14.41□□□□□ -0.1
POLR1B-202ENST00000333990 ATF3P18847 181 aa14.41□□□□□ -0.1
POLR1B-202ENST00000333990 RPGRIP1LQ68CZ1 1315 aa14.39□□□□□ -0.11
POLR1B-202ENST00000333990 OS9Q13438 667 aaPredicted RBP14.39□□□□□ -0.11
POLR1B-202ENST00000333990 PPP4R2Q9NY27 417 aa14.39□□□□□ -0.11
POLR1B-202ENST00000333990 PSME1Q06323 249 aa14.38□□□□□ -0.11
POLR1B-202ENST00000333990 PDE3BQ13370 1112 aa14.38□□□□□ -0.11
POLR1B-202ENST00000333990 STK31Q9BXU1 1019 aa14.37□□□□□ -0.11
POLR1B-202ENST00000333990 HDAC5Q9UQL6 1122 aa14.37□□□□□ -0.11
POLR1B-202ENST00000333990 WDR62O43379 1518 aa14.37□□□□□ -0.11
POLR1B-202ENST00000333990 ANKRD30BQ9BXX2 1392 aa14.36□□□□□ -0.11
POLR1B-202ENST00000333990 CAMSAP2Q08AD1 1489 aa14.36□□□□□ -0.11
POLR1B-202ENST00000333990 LTV1Q96GA3 475 aaPredicted RBP14.36□□□□□ -0.11
POLR1B-202ENST00000333990 DENND4BO75064 1496 aaPredicted RBP14.36□□□□□ -0.11
POLR1B-202ENST00000333990 GOLGA2Q08379 1002 aa14.35□□□□□ -0.11
POLR1B-202ENST00000333990 CFAP70Q5T0N1 1121 aa14.35□□□□□ -0.11
POLR1B-202ENST00000333990 ANKLE2Q86XL3 938 aa14.35□□□□□ -0.11
POLR1B-202ENST00000333990 PPP6R1Q9UPN7 881 aa14.34□□□□□ -0.11
POLR1B-202ENST00000333990 KIF21AQ7Z4S6 1674 aa14.34□□□□□ -0.11
POLR1B-202ENST00000333990 THOC2Q8NI27 1593 aaKnown RBP14.34□□□□□ -0.11
POLR1B-202ENST00000333990 NGEFQ8N5V2 710 aa14.34□□□□□ -0.11
POLR1B-202ENST00000333990 ADAMTS12P58397 1594 aa14.33□□□□□ -0.11
POLR1B-202ENST00000333990 FANCAO15360 1455 aa14.33□□□□□ -0.11
POLR1B-202ENST00000333990 BECN1Q14457 450 aa14.33□□□□□ -0.12
POLR1B-202ENST00000333990 TMEM132EQ6IEE7 984 aa14.33□□□□□ -0.12
POLR1B-202ENST00000333990 PRKRIP1Q9H875 184 aaPredicted RBP14.33□□□□□ -0.12
POLR1B-202ENST00000333990 EVA1CP58658 441 aa14.32□□□□□ -0.12
POLR1B-202ENST00000333990 NAIPQ13075 1403 aa14.32□□□□□ -0.12
POLR1B-202ENST00000333990 PROSER2Q86WR7 435 aaPredicted RBP14.32□□□□□ -0.12
POLR1B-202ENST00000333990 RCAN3Q9UKA8 241 aa14.31□□□□□ -0.12
POLR1B-202ENST00000333990 ANP32BQ92688 251 aaKnown RBP14.31□□□□□ -0.12
POLR1B-202ENST00000333990 PTPN23Q9H3S7 1636 aa14.3□□□□□ -0.12
POLR1B-202ENST00000333990 UGGT2Q9NYU1 1516 aa14.3□□□□□ -0.12
POLR1B-202ENST00000333990 AKNAQ7Z591 1439 aa14.3□□□□□ -0.12
POLR1B-202ENST00000333990 TEX14Q8IWB6 1497 aa14.3□□□□□ -0.12
POLR1B-202ENST00000333990 DDRGK1Q96HY6 314 aa14.3□□□□□ -0.12
POLR1B-202ENST00000333990 ABCC5O15440 1437 aa14.3□□□□□ -0.12
POLR1B-202ENST00000333990 RAPGEF6Q8TEU7 1601 aa14.3□□□□□ -0.12
POLR1B-202ENST00000333990 CFAP44Q96MT7 982 aa14.29□□□□□ -0.12
POLR1B-202ENST00000333990 EIF4G3O43432 1585 aaKnown RBP14.29□□□□□ -0.12
POLR1B-202ENST00000333990 C1orf141Q5JVX7 400 aa14.29□□□□□ -0.12
POLR1B-202ENST00000333990 GPRASP1Q5JY77 1395 aa14.29□□□□□ -0.12
POLR1B-202ENST00000333990 DIAPH1O60610 1272 aaKnown RBP14.29□□□□□ -0.12
POLR1B-202ENST00000333990 ERICH6BQ5W0A0 696 aa14.29□□□□□ -0.12
POLR1B-202ENST00000333990 CCDC7Q96M83 1385 aa14.28□□□□□ -0.12
POLR1B-202ENST00000333990 ATP10BO94823 1461 aa14.28□□□□□ -0.12
POLR1B-202ENST00000333990 ASXL2Q76L83 1435 aa14.27□□□□□ -0.12
POLR1B-202ENST00000333990 ERBINQ96RT1 1412 aa14.27□□□□□ -0.12
POLR1B-202ENST00000333990 ZNF330Q9Y3S2 320 aaPredicted RBP14.27□□□□□ -0.13
POLR1B-202ENST00000333990 NCOA1Q15788 1441 aa14.27□□□□□ -0.13
POLR1B-202ENST00000333990 CCDC146Q8IYE0 955 aa14.27□□□□□ -0.13
POLR1B-202ENST00000333990 KIF7Q2M1P5 1343 aa14.26□□□□□ -0.13
POLR1B-202ENST00000333990 TEFQ10587 303 aa14.26□□□□□ -0.13
POLR1B-202ENST00000333990 WDR97A6NE52 1622 aa14.26□□□□□ -0.13
POLR1B-202ENST00000333990 RGS3P49796 1198 aa14.26□□□□□ -0.13
POLR1B-202ENST00000333990 SMC4Q9NTJ3 1288 aa14.26□□□□□ -0.13
POLR1B-202ENST00000333990 PLCH2O75038 1416 aa14.26□□□□□ -0.13
POLR1B-202ENST00000333990 PRAM1Q96QH2 718 aa14.25□□□□□ -0.13
POLR1B-202ENST00000333990 NUP160Q12769 1436 aa14.25□□□□□ -0.13
POLR1B-202ENST00000333990 CABP2Q9NPB3 220 aa14.25□□□□□ -0.13
POLR1B-202ENST00000333990 CTTNBP2Q8WZ74 1663 aa14.24□□□□□ -0.13
POLR1B-202ENST00000333990 DHX29Q7Z478 1369 aaKnown RBP14.24□□□□□ -0.13
POLR1B-202ENST00000333990 GPATCH8Q9UKJ3 1502 aaKnown RBP14.24□□□□□ -0.13
POLR1B-202ENST00000333990 NLRP6P59044 892 aa14.24□□□□□ -0.13
POLR1B-202ENST00000333990 ZNF692Q9BU19 519 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms