RNA–Protein interactions for RNA: ENST00000333007.5

TNFAIP2-201, Transcript of TNF alpha induced protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP2, Length 4,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-201ENST00000333007 KANK1Q14678 1352 aa23.52■■□□□ 1.36
TNFAIP2-201ENST00000333007 SNAPC4Q5SXM2 1469 aa23.52■■□□□ 1.35
TNFAIP2-201ENST00000333007 SPAG9O60271 1321 aaKnown RBP23.52■■□□□ 1.35
TNFAIP2-201ENST00000333007 PAK3O75914 559 aaPredicted RBP23.51■■□□□ 1.35
TNFAIP2-201ENST00000333007 FTSJ3Q8IY81 847 aaKnown RBP23.51■■□□□ 1.35
TNFAIP2-201ENST00000333007 GGT6Q6P531 493 aa23.5■■□□□ 1.35
TNFAIP2-201ENST00000333007 BRD4O60885 1362 aaPredicted RBP23.5■■□□□ 1.35
TNFAIP2-201ENST00000333007 U2SURPO15042 1029 aaKnown RBP23.5■■□□□ 1.35
TNFAIP2-201ENST00000333007 CFAP43Q8NDM7 1665 aa23.49■■□□□ 1.35
TNFAIP2-201ENST00000333007 RPRD2Q5VT52 1461 aaKnown RBP23.48■■□□□ 1.35
TNFAIP2-201ENST00000333007 SLC4A3P48751 1232 aa23.48■■□□□ 1.35
TNFAIP2-201ENST00000333007 C9orf84Q5VXU9 1444 aa23.47■■□□□ 1.35
TNFAIP2-201ENST00000333007 LAMC3Q9Y6N6 1575 aa23.47■■□□□ 1.35
TNFAIP2-201ENST00000333007 MRC2Q9UBG0 1479 aa23.47■■□□□ 1.35
TNFAIP2-201ENST00000333007 ESF1Q9H501 851 aaKnown RBP23.47■■□□□ 1.35
TNFAIP2-201ENST00000333007 SMG6Q86US8 1419 aaKnown RBP23.46■■□□□ 1.35
TNFAIP2-201ENST00000333007 KIAA0586Q9BVV6 1533 aa23.45■■□□□ 1.34
TNFAIP2-201ENST00000333007 UGGT2Q9NYU1 1516 aa23.45■■□□□ 1.34
TNFAIP2-201ENST00000333007 THOC2Q8NI27 1593 aaKnown RBP23.44■■□□□ 1.34
TNFAIP2-201ENST00000333007 PLB1Q6P1J6 1458 aa23.43■■□□□ 1.34
TNFAIP2-201ENST00000333007 APAF1O14727 1248 aa23.43■■□□□ 1.34
TNFAIP2-201ENST00000333007 ADAMTS8Q9UP79 889 aa23.43■■□□□ 1.34
TNFAIP2-201ENST00000333007 RRP7AQ9Y3A4 280 aaKnown RBP23.41■■□□□ 1.34
TNFAIP2-201ENST00000333007 MAPK8IP3Q9UPT6 1336 aa23.41■■□□□ 1.34
TNFAIP2-201ENST00000333007 IFT140Q96RY7 1462 aa23.4■■□□□ 1.34
TNFAIP2-201ENST00000333007 CLUAP1Q96AJ1 413 aa23.4■■□□□ 1.34
TNFAIP2-201ENST00000333007 NUTM2DQ5VT03 806 aaPredicted RBP23.39■■□□□ 1.33
TNFAIP2-201ENST00000333007 TRAK1Q9UPV9 953 aa23.39■■□□□ 1.33
TNFAIP2-201ENST00000333007 CAMSAP2Q08AD1 1489 aa23.38■■□□□ 1.33
TNFAIP2-201ENST00000333007 STK26Q9P289 416 aa23.38■■□□□ 1.33
TNFAIP2-201ENST00000333007 U2AF1L5P0DN76 240 aaPredicted RBP23.38■■□□□ 1.33
TNFAIP2-201ENST00000333007 U2AF1Q01081 240 aaKnown RBP eCLIP23.38■■□□□ 1.33
TNFAIP2-201ENST00000333007 POGKQ9P215 609 aa23.37■■□□□ 1.33
TNFAIP2-201ENST00000333007 ZNF608Q9ULD9 1512 aaPredicted RBP23.37■■□□□ 1.33
TNFAIP2-201ENST00000333007 SRPK2P78362 688 aaKnown RBP23.36■■□□□ 1.33
TNFAIP2-201ENST00000333007 SPRYD3Q8NCJ5 442 aa23.35■■□□□ 1.33
TNFAIP2-201ENST00000333007 EIF3AQ14152 1382 aaKnown RBP23.35■■□□□ 1.33
TNFAIP2-201ENST00000333007 CTTNBP2Q8WZ74 1663 aa23.35■■□□□ 1.33
TNFAIP2-201ENST00000333007 CENPQQ7L2Z9 268 aaPredicted RBP23.34■■□□□ 1.33
TNFAIP2-201ENST00000333007 MS4A1P11836 297 aa23.34■■□□□ 1.33
TNFAIP2-201ENST00000333007 BCL2L13Q9BXK5 485 aa23.34■■□□□ 1.33
TNFAIP2-201ENST00000333007 SLKQ9H2G2 1235 aaPredicted RBP23.34■■□□□ 1.33
TNFAIP2-201ENST00000333007 CENPJQ9HC77 1338 aaPredicted RBP23.32■■□□□ 1.32
TNFAIP2-201ENST00000333007 AFAP1Q8N556 730 aa23.32■■□□□ 1.32
TNFAIP2-201ENST00000333007 ARHGEF11O15085 1522 aa23.31■■□□□ 1.32
TNFAIP2-201ENST00000333007 COG6Q9Y2V7 657 aa23.3■■□□□ 1.32
TNFAIP2-201ENST00000333007 SKAP1Q86WV1 359 aa23.29■■□□□ 1.32
TNFAIP2-201ENST00000333007 FAM161AQ3B820 660 aa23.29■■□□□ 1.32
TNFAIP2-201ENST00000333007 SYNJ2O15056 1496 aa23.28■■□□□ 1.32
TNFAIP2-201ENST00000333007 PPP2R1AP30153 589 aa23.27■■□□□ 1.32
TNFAIP2-201ENST00000333007 MYH16Q9H6N6 1097 aa23.26■■□□□ 1.31
TNFAIP2-201ENST00000333007 TCOF1Q13428 1488 aaKnown RBP23.26■■□□□ 1.31
TNFAIP2-201ENST00000333007 ARHGAP5Q13017 1502 aa23.25■■□□□ 1.31
TNFAIP2-201ENST00000333007 GRIN2AQ12879 1464 aa23.25■■□□□ 1.31
TNFAIP2-201ENST00000333007 E9PSI1 815 aa23.24■■□□□ 1.31
TNFAIP2-201ENST00000333007 CFAP70Q5T0N1 1121 aa23.23■■□□□ 1.31
TNFAIP2-201ENST00000333007 ANP32BQ92688 251 aaKnown RBP23.22■■□□□ 1.31
TNFAIP2-201ENST00000333007 GPATCH8Q9UKJ3 1502 aaKnown RBP23.22■■□□□ 1.31
TNFAIP2-201ENST00000333007 NUP153P49790 1475 aaKnown RBP23.22■■□□□ 1.31
TNFAIP2-201ENST00000333007 BACH2Q9BYV9 841 aa23.21■■□□□ 1.31
TNFAIP2-201ENST00000333007 WASHC2CQ9Y4E1 1318 aa23.2■■□□□ 1.31
TNFAIP2-201ENST00000333007 MAGI1Q96QZ7 1491 aaPredicted RBP23.2■■□□□ 1.3
TNFAIP2-201ENST00000333007 ITPRIPQ8IWB1 547 aa23.19■■□□□ 1.3
TNFAIP2-201ENST00000333007 RWDD1Q9H446 243 aaPredicted RBP23.19■■□□□ 1.3
TNFAIP2-201ENST00000333007 USP35Q9P2H5 1018 aa23.19■■□□□ 1.3
TNFAIP2-201ENST00000333007 MAGI3Q5TCQ9 1506 aa23.19■■□□□ 1.3
TNFAIP2-201ENST00000333007 SMC4Q9NTJ3 1288 aa23.18■■□□□ 1.3
TNFAIP2-201ENST00000333007 GLIPR1L2Q4G1C9 344 aa23.17■■□□□ 1.3
TNFAIP2-201ENST00000333007 ERBINQ96RT1 1412 aa23.17■■□□□ 1.3
TNFAIP2-201ENST00000333007 NAP1L5Q96NT1 182 aaPredicted RBP23.17■■□□□ 1.3
TNFAIP2-201ENST00000333007 C20orf194Q5TEA3 1177 aa23.16■■□□□ 1.3
TNFAIP2-201ENST00000333007 PMFBP1Q8TBY8 1022 aa23.16■■□□□ 1.3
TNFAIP2-201ENST00000333007 PANK1Q8TE04 598 aa23.15■■□□□ 1.3
TNFAIP2-201ENST00000333007 CGNL1Q0VF96 1302 aa23.14■■□□□ 1.29
TNFAIP2-201ENST00000333007 BCAR3O75815 825 aa23.14■■□□□ 1.29
TNFAIP2-201ENST00000333007 GZF1Q9H116 711 aaPredicted RBP23.13■■□□□ 1.29
TNFAIP2-201ENST00000333007 MFAP1P55081 439 aaKnown RBP23.13■■□□□ 1.29
TNFAIP2-201ENST00000333007 DHX29Q7Z478 1369 aaKnown RBP23.12■■□□□ 1.29
TNFAIP2-201ENST00000333007 TMEM132EQ6IEE7 984 aa23.12■■□□□ 1.29
TNFAIP2-201ENST00000333007 WDR62O43379 1518 aa23.12■■□□□ 1.29
TNFAIP2-201ENST00000333007 SAMD9Q5K651 1589 aa23.1■■□□□ 1.29
TNFAIP2-201ENST00000333007 MLECQ14165 292 aa23.09■■□□□ 1.29
TNFAIP2-201ENST00000333007 GSE1Q14687 1217 aa23.09■■□□□ 1.29
TNFAIP2-201ENST00000333007 CCDC141Q6ZP82 1450 aa23.09■■□□□ 1.29
TNFAIP2-201ENST00000333007 TRIM44Q96DX7 344 aaPredicted RBP23.09■■□□□ 1.29
TNFAIP2-201ENST00000333007 HSCBQ8IWL3 235 aa23.08■■□□□ 1.29
TNFAIP2-201ENST00000333007 HSP90AB1P08238 724 aaKnown RBP23.08■■□□□ 1.29
TNFAIP2-201ENST00000333007 TEX14Q8IWB6 1497 aa23.08■■□□□ 1.28
TNFAIP2-201ENST00000333007 TPRNQ4KMQ1 711 aa23.08■■□□□ 1.28
TNFAIP2-201ENST00000333007 PZPP20742 1482 aa23.07■■□□□ 1.28
TNFAIP2-201ENST00000333007 NFKBIBQ15653 356 aa23.07■■□□□ 1.28
TNFAIP2-201ENST00000333007 ANO8Q9HCE9 1232 aaPredicted RBP23.07■■□□□ 1.28
TNFAIP2-201ENST00000333007 SOX12O15370 315 aa23.07■■□□□ 1.28
TNFAIP2-201ENST00000333007 RAPGEF6Q8TEU7 1601 aa23.07■■□□□ 1.28
TNFAIP2-201ENST00000333007 NCLP19338 710 aaKnown RBP23.06■■□□□ 1.28
TNFAIP2-201ENST00000333007 HDGFL2Q7Z4V5 671 aaPredicted RBP23.06■■□□□ 1.28
TNFAIP2-201ENST00000333007 DISP3Q9P2K9 1392 aa23.06■■□□□ 1.28
TNFAIP2-201ENST00000333007 KDM6BO15054 1643 aa23.06■■□□□ 1.28
TNFAIP2-201ENST00000333007 PNNQ9H307 717 aaKnown RBP23.05■■□□□ 1.28
TNFAIP2-201ENST00000333007 IL27Q8NEV9 243 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms