RNA–Protein interactions for RNA: ENST00000330891.9

BEST3-202, Transcript of bestrophin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BEST3, Length 3,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-202ENST00000330891 NUDCQ9Y266 331 aa9.48□□□□□ -0.89
BEST3-202ENST00000330891 KIAA1107Q9UPP5 1409 aa9.48□□□□□ -0.89
BEST3-202ENST00000330891 REREQ9P2R6 1566 aa9.48□□□□□ -0.89
BEST3-202ENST00000330891 PANK3Q9H999 370 aa9.48□□□□□ -0.89
BEST3-202ENST00000330891 CARMIL2Q6F5E8 1435 aa9.48□□□□□ -0.89
BEST3-202ENST00000330891 TNNT2P45379 298 aaPredicted RBP9.47□□□□□ -0.89
BEST3-202ENST00000330891 AFAP1Q8N556 730 aa9.47□□□□□ -0.89
BEST3-202ENST00000330891 PTPRGP23470 1445 aa9.47□□□□□ -0.89
BEST3-202ENST00000330891 RTL5Q5HYW3 569 aaPredicted RBP9.47□□□□□ -0.89
BEST3-202ENST00000330891 DHX29Q7Z478 1369 aaKnown RBP9.46□□□□□ -0.89
BEST3-202ENST00000330891 C9orf84Q5VXU9 1444 aa9.46□□□□□ -0.89
BEST3-202ENST00000330891 ROCK1Q13464 1354 aa9.46□□□□□ -0.89
BEST3-202ENST00000330891 SPATA31E1Q6ZUB1 1445 aa9.46□□□□□ -0.9
BEST3-202ENST00000330891 ZCCHC11Q5TAX3 1644 aaKnown RBP9.46□□□□□ -0.9
BEST3-202ENST00000330891 NUTM2DQ5VT03 806 aaPredicted RBP9.45□□□□□ -0.9
BEST3-202ENST00000330891 DAXXQ9UER7 740 aaPredicted RBP9.45□□□□□ -0.9
BEST3-202ENST00000330891 ATP10BO94823 1461 aa9.45□□□□□ -0.9
BEST3-202ENST00000330891 CCDC146Q8IYE0 955 aa9.44□□□□□ -0.9
BEST3-202ENST00000330891 RAPGEF6Q8TEU7 1601 aa9.44□□□□□ -0.9
BEST3-202ENST00000330891 ERCC6L2Q5T890 1561 aa9.44□□□□□ -0.9
BEST3-202ENST00000330891 DIP2BQ9P265 1576 aa9.42□□□□□ -0.9
BEST3-202ENST00000330891 ANP32AP39687 249 aaKnown RBP9.42□□□□□ -0.9
BEST3-202ENST00000330891 NEUROD2Q15784 382 aa9.42□□□□□ -0.9
BEST3-202ENST00000330891 RCAN3Q9UKA8 241 aa9.42□□□□□ -0.9
BEST3-202ENST00000330891 FRMPD1Q5SYB0 1578 aa9.42□□□□□ -0.9
BEST3-202ENST00000330891 GCC2Q8IWJ2 1684 aa9.41□□□□□ -0.9
BEST3-202ENST00000330891 PRKCSHP14314 528 aaPredicted RBP9.41□□□□□ -0.9
BEST3-202ENST00000330891 LAS1LQ9Y4W2 734 aaKnown RBP9.41□□□□□ -0.9
BEST3-202ENST00000330891 DNMT1P26358 1616 aaKnown RBP9.41□□□□□ -0.9
BEST3-202ENST00000330891 CCDC144AA2RUR9 1427 aa9.4□□□□□ -0.9
BEST3-202ENST00000330891 MYBBP1AQ9BQG0 1328 aaKnown RBP9.4□□□□□ -0.9
BEST3-202ENST00000330891 C20orf194Q5TEA3 1177 aa9.4□□□□□ -0.9
BEST3-202ENST00000330891 BCL11AQ9H165 835 aa9.4□□□□□ -0.9
BEST3-202ENST00000330891 RICTORQ6R327 1708 aa9.4□□□□□ -0.9
BEST3-202ENST00000330891 ADAMTS8Q9UP79 889 aa9.4□□□□□ -0.91
BEST3-202ENST00000330891 DISP3Q9P2K9 1392 aa9.39□□□□□ -0.91
BEST3-202ENST00000330891 SAFB2Q14151 953 aaKnown RBP eCLIP9.39□□□□□ -0.91
BEST3-202ENST00000330891 SLC4A3P48751 1232 aa9.39□□□□□ -0.91
BEST3-202ENST00000330891 MAST1Q9Y2H9 1570 aa9.38□□□□□ -0.91
BEST3-202ENST00000330891 KIF3BO15066 747 aa9.38□□□□□ -0.91
BEST3-202ENST00000330891 RRP1P56182 461 aaKnown RBP9.38□□□□□ -0.91
BEST3-202ENST00000330891 ZMYM4Q5VZL5 1548 aa9.38□□□□□ -0.91
BEST3-202ENST00000330891 PLEKHH2Q8IVE3 1493 aa9.38□□□□□ -0.91
BEST3-202ENST00000330891 NLRP13Q86W25 1043 aa9.38□□□□□ -0.91
BEST3-202ENST00000330891 KTN1Q86UP2 1357 aaKnown RBP9.38□□□□□ -0.91
BEST3-202ENST00000330891 ABCC2Q92887 1545 aa9.38□□□□□ -0.91
BEST3-202ENST00000330891 CRBNQ96SW2 442 aa9.38□□□□□ -0.91
BEST3-202ENST00000330891 KNSTRNQ9Y448 316 aa9.38□□□□□ -0.91
BEST3-202ENST00000330891 PREX2Q70Z35 1606 aa9.37□□□□□ -0.91
BEST3-202ENST00000330891 NOP58Q9Y2X3 529 aaKnown RBP9.37□□□□□ -0.91
BEST3-202ENST00000330891 CDC42BPAQ5VT25 1732 aa9.37□□□□□ -0.91
BEST3-202ENST00000330891 RTN4Q9NQC3 1192 aaKnown RBP9.37□□□□□ -0.91
BEST3-202ENST00000330891 FANCIQ9NVI1 1328 aa9.36□□□□□ -0.91
BEST3-202ENST00000330891 CDC42BPBQ9Y5S2 1711 aa9.36□□□□□ -0.91
BEST3-202ENST00000330891 ITSN2Q9NZM3 1697 aa9.36□□□□□ -0.91
BEST3-202ENST00000330891 TMF1P82094 1093 aa9.36□□□□□ -0.91
BEST3-202ENST00000330891 RALBP1Q15311 655 aa9.36□□□□□ -0.91
BEST3-202ENST00000330891 RGS3P49796 1198 aa9.36□□□□□ -0.91
BEST3-202ENST00000330891 WDR43Q15061 677 aaKnown RBP eCLIP9.36□□□□□ -0.91
BEST3-202ENST00000330891 PER1O15534 1290 aaPredicted RBP9.35□□□□□ -0.91
BEST3-202ENST00000330891 CFAP70Q5T0N1 1121 aa9.35□□□□□ -0.91
BEST3-202ENST00000330891 ZBTB47Q9UFB7 747 aaPredicted RBP9.35□□□□□ -0.91
BEST3-202ENST00000330891 RRP7AQ9Y3A4 280 aaKnown RBP9.35□□□□□ -0.91
BEST3-202ENST00000330891 DEPDC5O75140 1603 aa9.35□□□□□ -0.91
BEST3-202ENST00000330891 TESK2Q96S53 571 aa9.35□□□□□ -0.91
BEST3-202ENST00000330891 SMG6Q86US8 1419 aaKnown RBP9.35□□□□□ -0.91
BEST3-202ENST00000330891 ARHGAP5Q13017 1502 aa9.35□□□□□ -0.91
BEST3-202ENST00000330891 GGT6Q6P531 493 aa9.35□□□□□ -0.91
BEST3-202ENST00000330891 SIGLEC1Q9BZZ2 1709 aa9.34□□□□□ -0.91
BEST3-202ENST00000330891 CFAP74Q9C0B2 1584 aa9.34□□□□□ -0.91
BEST3-202ENST00000330891 DEKP35659 375 aaKnown RBP9.34□□□□□ -0.91
BEST3-202ENST00000330891 TMEM132EQ6IEE7 984 aa9.34□□□□□ -0.91
BEST3-202ENST00000330891 EFCAB2Q5VUJ9 269 aa9.33□□□□□ -0.92
BEST3-202ENST00000330891 SPAG9O60271 1321 aaKnown RBP9.33□□□□□ -0.92
BEST3-202ENST00000330891 KDM5CP41229 1560 aa9.33□□□□□ -0.92
BEST3-202ENST00000330891 TRAK1Q9UPV9 953 aa9.33□□□□□ -0.92
BEST3-202ENST00000330891 APAF1O14727 1248 aa9.32□□□□□ -0.92
BEST3-202ENST00000330891 SYCP2Q9BX26 1530 aa9.32□□□□□ -0.92
BEST3-202ENST00000330891 FAM135AQ9P2D6 1515 aa9.32□□□□□ -0.92
BEST3-202ENST00000330891 ERICH6BQ5W0A0 696 aa9.32□□□□□ -0.92
BEST3-202ENST00000330891 CANXP27824 592 aaKnown RBP9.31□□□□□ -0.92
BEST3-202ENST00000330891 BCL2L13Q9BXK5 485 aa9.31□□□□□ -0.92
BEST3-202ENST00000330891 PLXNC1O60486 1568 aa9.31□□□□□ -0.92
BEST3-202ENST00000330891 ABCC10Q5T3U5 1492 aa9.31□□□□□ -0.92
BEST3-202ENST00000330891 MBD5Q9P267 1494 aa9.31□□□□□ -0.92
BEST3-202ENST00000330891 PDE4AP27815 886 aa9.31□□□□□ -0.92
BEST3-202ENST00000330891 SPINK5Q9NQ38 1064 aaPredicted RBP9.31□□□□□ -0.92
BEST3-202ENST00000330891 PPP2R1AP30153 589 aa9.3□□□□□ -0.92
BEST3-202ENST00000330891 PLA2R1Q13018 1463 aa9.3□□□□□ -0.92
BEST3-202ENST00000330891 KDM5AP29375 1690 aaKnown RBP9.3□□□□□ -0.92
BEST3-202ENST00000330891 FRAT1Q92837 279 aaPredicted RBP9.3□□□□□ -0.92
BEST3-202ENST00000330891 BRD4O60885 1362 aaPredicted RBP9.3□□□□□ -0.92
BEST3-202ENST00000330891 BCAR3O75815 825 aa9.3□□□□□ -0.92
BEST3-202ENST00000330891 ADGBQ8N7X0 1667 aa9.29□□□□□ -0.92
BEST3-202ENST00000330891 RALGAPBQ86X10 1494 aa9.29□□□□□ -0.92
BEST3-202ENST00000330891 STK26Q9P289 416 aa9.29□□□□□ -0.92
BEST3-202ENST00000330891 DMRT2Q9Y5R5 561 aa9.29□□□□□ -0.92
BEST3-202ENST00000330891 PRAG1Q86YV5 1406 aa9.29□□□□□ -0.92
BEST3-202ENST00000330891 TRAPPC8Q9Y2L5 1435 aa9.29□□□□□ -0.92
BEST3-202ENST00000330891 CCDC141Q6ZP82 1450 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms