RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 CTTNBP2Q8WZ74 1663 aa10.93□□□□□ -0.66
SKA2-201ENST00000330137 VIRMAQ69YN4 1812 aaKnown RBP10.93□□□□□ -0.66
SKA2-201ENST00000330137 KDM2BQ8NHM5 1336 aa10.92□□□□□ -0.66
SKA2-201ENST00000330137 MBD5Q9P267 1494 aa10.92□□□□□ -0.66
SKA2-201ENST00000330137 ISY1Q9ULR0 285 aaKnown RBP10.92□□□□□ -0.66
SKA2-201ENST00000330137 MYBBP1AQ9BQG0 1328 aaKnown RBP10.92□□□□□ -0.66
SKA2-201ENST00000330137 CCDC144AA2RUR9 1427 aa10.92□□□□□ -0.66
SKA2-201ENST00000330137 ZBTB22O15209 634 aa10.92□□□□□ -0.66
SKA2-201ENST00000330137 PNNQ9H307 717 aaKnown RBP10.92□□□□□ -0.66
SKA2-201ENST00000330137 RRAGDQ9NQL2 400 aaPredicted RBP10.92□□□□□ -0.66
SKA2-201ENST00000330137 KIF14Q15058 1648 aa10.92□□□□□ -0.66
SKA2-201ENST00000330137 FRAT2O75474 233 aaPredicted RBP10.91□□□□□ -0.66
SKA2-201ENST00000330137 MPHOSPH9Q99550 1183 aa10.91□□□□□ -0.66
SKA2-201ENST00000330137 ROCK1Q13464 1354 aa10.91□□□□□ -0.66
SKA2-201ENST00000330137 NUP160Q12769 1436 aa10.91□□□□□ -0.66
SKA2-201ENST00000330137 KDM5CP41229 1560 aa10.9□□□□□ -0.66
SKA2-201ENST00000330137 E9PCH4 1651 aa10.89□□□□□ -0.67
SKA2-201ENST00000330137 FHOD3Q2V2M9 1422 aa10.89□□□□□ -0.67
SKA2-201ENST00000330137 BCORL1Q5H9F3 1711 aa10.89□□□□□ -0.67
SKA2-201ENST00000330137 C8orf34Q49A92 452 aa10.88□□□□□ -0.67
SKA2-201ENST00000330137 SAMD9Q5K651 1589 aa10.88□□□□□ -0.67
SKA2-201ENST00000330137 TPM2P07951 284 aa10.88□□□□□ -0.67
SKA2-201ENST00000330137 NBPF8Q3BBV2 869 aa10.88□□□□□ -0.67
SKA2-201ENST00000330137 ZMYM3Q14202 1370 aa10.88□□□□□ -0.67
SKA2-201ENST00000330137 BECN1Q14457 450 aa10.88□□□□□ -0.67
SKA2-201ENST00000330137 JPH4Q96JJ6 628 aa10.88□□□□□ -0.67
SKA2-201ENST00000330137 PODXL2Q9NZ53 605 aa10.88□□□□□ -0.67
SKA2-201ENST00000330137 FSD2A1L4K1 749 aa10.87□□□□□ -0.67
SKA2-201ENST00000330137 FOXD1Q16676 465 aa10.87□□□□□ -0.67
SKA2-201ENST00000330137 PDCL3Q9H2J4 239 aa10.87□□□□□ -0.67
SKA2-201ENST00000330137 UHRF1BP1Q6BDS2 1440 aa10.87□□□□□ -0.67
SKA2-201ENST00000330137 BLMP54132 1417 aaPredicted RBP10.85□□□□□ -0.67
SKA2-201ENST00000330137 PRG4Q92954 1404 aaPredicted RBP10.85□□□□□ -0.67
SKA2-201ENST00000330137 CALD1Q05682 793 aaKnown RBP10.85□□□□□ -0.67
SKA2-201ENST00000330137 NAP1L5Q96NT1 182 aaPredicted RBP10.85□□□□□ -0.67
SKA2-201ENST00000330137 USP47Q96K76 1375 aa10.85□□□□□ -0.67
SKA2-201ENST00000330137 LRRIQ1Q96JM4 1722 aa10.85□□□□□ -0.67
SKA2-201ENST00000330137 ERCC6L2Q5T890 1561 aa10.85□□□□□ -0.67
SKA2-201ENST00000330137 EIF3AQ14152 1382 aaKnown RBP10.84□□□□□ -0.67
SKA2-201ENST00000330137 PPP4R3CPQ6ZMV5 832 aa10.84□□□□□ -0.67
SKA2-201ENST00000330137 NLRP13Q86W25 1043 aa10.84□□□□□ -0.67
SKA2-201ENST00000330137 RALGAPBQ86X10 1494 aa10.84□□□□□ -0.67
SKA2-201ENST00000330137 GOLGA6L3A6NEY3 463 aa10.83□□□□□ -0.68
SKA2-201ENST00000330137 TERF1P54274 439 aa10.83□□□□□ -0.68
SKA2-201ENST00000330137 KIAA0586Q9BVV6 1533 aa10.83□□□□□ -0.68
SKA2-201ENST00000330137 KDM6BO15054 1643 aa10.83□□□□□ -0.68
SKA2-201ENST00000330137 PARD3Q8TEW0 1356 aa10.83□□□□□ -0.68
SKA2-201ENST00000330137 SHROOM2Q13796 1616 aa10.82□□□□□ -0.68
SKA2-201ENST00000330137 ARHGEF12Q9NZN5 1544 aa10.82□□□□□ -0.68
SKA2-201ENST00000330137 MRE11P49959 708 aa10.82□□□□□ -0.68
SKA2-201ENST00000330137 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.82□□□□□ -0.68
SKA2-201ENST00000330137 MAP7D2Q96T17 732 aa10.82□□□□□ -0.68
SKA2-201ENST00000330137 CRBNQ96SW2 442 aa10.82□□□□□ -0.68
SKA2-201ENST00000330137 POGKQ9P215 609 aa10.81□□□□□ -0.68
SKA2-201ENST00000330137 IQGAP2Q13576 1575 aa10.81□□□□□ -0.68
SKA2-201ENST00000330137 SLC4A3P48751 1232 aa10.8□□□□□ -0.68
SKA2-201ENST00000330137 XRCC6P12956 609 aaKnown RBP eCLIP10.8□□□□□ -0.68
SKA2-201ENST00000330137 TRHP20396 242 aaPredicted RBP10.8□□□□□ -0.68
SKA2-201ENST00000330137 ANTXR1Q9H6X2 564 aa10.79□□□□□ -0.68
SKA2-201ENST00000330137 SCAPERQ9BY12 1400 aa10.79□□□□□ -0.68
SKA2-201ENST00000330137 ATP1B4Q9UN42 357 aaPredicted RBP10.78□□□□□ -0.68
SKA2-201ENST00000330137 DNMT1P26358 1616 aaKnown RBP10.78□□□□□ -0.68
SKA2-201ENST00000330137 MAPK8IP3Q9UPT6 1336 aa10.78□□□□□ -0.68
SKA2-201ENST00000330137 CARMIL2Q6F5E8 1435 aa10.77□□□□□ -0.68
SKA2-201ENST00000330137 RRP7BPQ9NSQ0 103 aa10.77□□□□□ -0.69
SKA2-201ENST00000330137 AAMPQ13685 434 aa10.77□□□□□ -0.69
SKA2-201ENST00000330137 ESPNB1AK53 854 aa10.76□□□□□ -0.69
SKA2-201ENST00000330137 NINLQ9Y2I6 1382 aa10.76□□□□□ -0.69
SKA2-201ENST00000330137 USP19O94966 1318 aa10.76□□□□□ -0.69
SKA2-201ENST00000330137 MTERF4Q7Z6M4 381 aaKnown RBP10.76□□□□□ -0.69
SKA2-201ENST00000330137 PTMSP20962 102 aa10.75□□□□□ -0.69
SKA2-201ENST00000330137 KIAA1107Q9UPP5 1409 aa10.75□□□□□ -0.69
SKA2-201ENST00000330137 NPM1P06748 294 aaKnown RBP eCLIP10.74□□□□□ -0.69
SKA2-201ENST00000330137 MYH16Q9H6N6 1097 aa10.74□□□□□ -0.69
SKA2-201ENST00000330137 DAPK1P53355 1430 aa10.74□□□□□ -0.69
SKA2-201ENST00000330137 NLRP1Q9C000 1473 aa10.74□□□□□ -0.69
SKA2-201ENST00000330137 P3H3Q8IVL6 736 aa10.73□□□□□ -0.69
SKA2-201ENST00000330137 PZPP20742 1482 aa10.73□□□□□ -0.69
SKA2-201ENST00000330137 PTPRGP23470 1445 aa10.73□□□□□ -0.69
SKA2-201ENST00000330137 MAGI3Q5TCQ9 1506 aa10.73□□□□□ -0.69
SKA2-201ENST00000330137 MCM4P33991 863 aa10.72□□□□□ -0.69
SKA2-201ENST00000330137 DDX11L8A8MPP1 907 aa10.72□□□□□ -0.69
SKA2-201ENST00000330137 UPF2Q9HAU5 1272 aaKnown RBP10.72□□□□□ -0.69
SKA2-201ENST00000330137 PRDM4Q9UKN5 801 aa10.72□□□□□ -0.69
SKA2-201ENST00000330137 ANKRD30AQ9BXX3 1397 aa10.72□□□□□ -0.69
SKA2-201ENST00000330137 NPM3O75607 178 aaKnown RBP10.71□□□□□ -0.69
SKA2-201ENST00000330137 LAMC1P11047 1609 aa10.71□□□□□ -0.69
SKA2-201ENST00000330137 ADGBQ8N7X0 1667 aa10.71□□□□□ -0.7
SKA2-201ENST00000330137 NGEFQ8N5V2 710 aa10.7□□□□□ -0.7
SKA2-201ENST00000330137 CDCA7LQ96GN5 454 aa10.7□□□□□ -0.7
SKA2-201ENST00000330137 GRPEL1Q9HAV7 217 aa10.7□□□□□ -0.7
SKA2-201ENST00000330137 PLIN1O60240 522 aa10.7□□□□□ -0.7
SKA2-201ENST00000330137 SMAP1Q8IYB5 467 aaPredicted RBP10.7□□□□□ -0.7
SKA2-201ENST00000330137 TRIM44Q96DX7 344 aaPredicted RBP10.7□□□□□ -0.7
SKA2-201ENST00000330137 CHMP5Q9NZZ3 219 aa10.7□□□□□ -0.7
SKA2-201ENST00000330137 CAMSAP2Q08AD1 1489 aa10.7□□□□□ -0.7
SKA2-201ENST00000330137 EPRSP07814 1512 aaKnown RBP10.69□□□□□ -0.7
SKA2-201ENST00000330137 KIAA0556O60303 1618 aa10.69□□□□□ -0.7
SKA2-201ENST00000330137 AMER1Q5JTC6 1135 aaPredicted RBP10.69□□□□□ -0.7
SKA2-201ENST00000330137 DISP1Q96F81 1524 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms