RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 CENPJQ9HC77 1338 aaPredicted RBP9.93□□□□□ -0.82
TRIM49-201ENST00000329758 HNRNPMP52272 730 aaKnown RBP eCLIP9.93□□□□□ -0.82
TRIM49-201ENST00000329758 L3MBTL2Q969R5 705 aa9.93□□□□□ -0.82
TRIM49-201ENST00000329758 MYO5CQ9NQX4 1742 aa9.91□□□□□ -0.82
TRIM49-201ENST00000329758 SAMD9LQ8IVG5 1584 aa9.91□□□□□ -0.82
TRIM49-201ENST00000329758 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.91□□□□□ -0.82
TRIM49-201ENST00000329758 NFKBIBQ15653 356 aa9.91□□□□□ -0.82
TRIM49-201ENST00000329758 TCERG1O14776 1098 aaKnown RBP9.9□□□□□ -0.82
TRIM49-201ENST00000329758 HSPA5P11021 654 aaKnown RBP9.9□□□□□ -0.82
TRIM49-201ENST00000329758 RNF123Q5XPI4 1314 aa9.9□□□□□ -0.82
TRIM49-201ENST00000329758 SMG6Q86US8 1419 aaKnown RBP9.9□□□□□ -0.83
TRIM49-201ENST00000329758 CALD1Q05682 793 aaKnown RBP9.9□□□□□ -0.83
TRIM49-201ENST00000329758 NBPF8Q3BBV2 869 aa9.9□□□□□ -0.83
TRIM49-201ENST00000329758 A0A0U1RQG5 324 aaPredicted RBP9.89□□□□□ -0.83
TRIM49-201ENST00000329758 ZNF326Q5BKZ1 582 aaKnown RBP9.89□□□□□ -0.83
TRIM49-201ENST00000329758 ROCK1Q13464 1354 aa9.88□□□□□ -0.83
TRIM49-201ENST00000329758 NCOA1Q15788 1441 aa9.88□□□□□ -0.83
TRIM49-201ENST00000329758 UHRF1BP1LA0JNW5 1464 aa9.88□□□□□ -0.83
TRIM49-201ENST00000329758 MS4A1P11836 297 aa9.88□□□□□ -0.83
TRIM49-201ENST00000329758 PDIA4P13667 645 aaKnown RBP9.88□□□□□ -0.83
TRIM49-201ENST00000329758 PKD2Q13563 968 aa9.87□□□□□ -0.83
TRIM49-201ENST00000329758 ANKRD30BQ9BXX2 1392 aa9.87□□□□□ -0.83
TRIM49-201ENST00000329758 ADGRL2O95490 1459 aa9.87□□□□□ -0.83
TRIM49-201ENST00000329758 CNGB1Q14028 1251 aaPredicted RBP9.87□□□□□ -0.83
TRIM49-201ENST00000329758 RRAGDQ9NQL2 400 aaPredicted RBP9.87□□□□□ -0.83
TRIM49-201ENST00000329758 SYCP2Q9BX26 1530 aa9.86□□□□□ -0.83
TRIM49-201ENST00000329758 PZPP20742 1482 aa9.86□□□□□ -0.83
TRIM49-201ENST00000329758 NAP1L5Q96NT1 182 aaPredicted RBP9.86□□□□□ -0.83
TRIM49-201ENST00000329758 ARHGEF5Q12774 1597 aa9.86□□□□□ -0.83
TRIM49-201ENST00000329758 ARHGAP5Q13017 1502 aa9.86□□□□□ -0.83
TRIM49-201ENST00000329758 NPM2Q86SE8 214 aaKnown RBP9.85□□□□□ -0.83
TRIM49-201ENST00000329758 DCAF11Q8TEB1 546 aa9.85□□□□□ -0.83
TRIM49-201ENST00000329758 CLCN1P35523 988 aa9.85□□□□□ -0.83
TRIM49-201ENST00000329758 PNNQ9H307 717 aaKnown RBP9.85□□□□□ -0.83
TRIM49-201ENST00000329758 MBD5Q9P267 1494 aa9.85□□□□□ -0.83
TRIM49-201ENST00000329758 SHANK2Q9UPX8 1470 aa9.85□□□□□ -0.83
TRIM49-201ENST00000329758 L1TD1Q5T7N2 865 aaKnown RBP9.84□□□□□ -0.83
TRIM49-201ENST00000329758 BACH2Q9BYV9 841 aa9.84□□□□□ -0.83
TRIM49-201ENST00000329758 C9orf84Q5VXU9 1444 aa9.84□□□□□ -0.83
TRIM49-201ENST00000329758 ANKRD30AQ9BXX3 1397 aa9.83□□□□□ -0.84
TRIM49-201ENST00000329758 PDE4AP27815 886 aa9.83□□□□□ -0.84
TRIM49-201ENST00000329758 ANKRD50Q9ULJ7 1429 aa9.83□□□□□ -0.84
TRIM49-201ENST00000329758 TSPY4P0CV99 314 aa9.82□□□□□ -0.84
TRIM49-201ENST00000329758 TSPY10P0CW01 314 aa9.82□□□□□ -0.84
TRIM49-201ENST00000329758 PRDM4Q9UKN5 801 aa9.82□□□□□ -0.84
TRIM49-201ENST00000329758 NUP155O75694 1391 aa9.82□□□□□ -0.84
TRIM49-201ENST00000329758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.82□□□□□ -0.84
TRIM49-201ENST00000329758 CNTLNQ9NXG0 1405 aa9.82□□□□□ -0.84
TRIM49-201ENST00000329758 POLR1AO95602 1720 aaPredicted RBP9.82□□□□□ -0.84
TRIM49-201ENST00000329758 CCDC141Q6ZP82 1450 aa9.82□□□□□ -0.84
TRIM49-201ENST00000329758 EIF4G2P78344 907 aaKnown RBP eCLIP9.81□□□□□ -0.84
TRIM49-201ENST00000329758 POLR3GLQ9BT43 218 aa9.81□□□□□ -0.84
TRIM49-201ENST00000329758 KDM2AQ9Y2K7 1162 aa9.81□□□□□ -0.84
TRIM49-201ENST00000329758 RPRD2Q5VT52 1461 aaKnown RBP9.81□□□□□ -0.84
TRIM49-201ENST00000329758 PDCL3Q9H2J4 239 aa9.81□□□□□ -0.84
TRIM49-201ENST00000329758 ARHGEF12Q9NZN5 1544 aa9.81□□□□□ -0.84
TRIM49-201ENST00000329758 KIF15Q9NS87 1388 aa9.81□□□□□ -0.84
TRIM49-201ENST00000329758 TEX14Q8IWB6 1497 aa9.81□□□□□ -0.84
TRIM49-201ENST00000329758 WDR7Q9Y4E6 1490 aa9.8□□□□□ -0.84
TRIM49-201ENST00000329758 TPM2P07951 284 aa9.8□□□□□ -0.84
TRIM49-201ENST00000329758 CCDC184Q52MB2 194 aa9.8□□□□□ -0.84
TRIM49-201ENST00000329758 OSCARQ8IYS5 282 aa9.8□□□□□ -0.84
TRIM49-201ENST00000329758 NUDCQ9Y266 331 aa9.8□□□□□ -0.84
TRIM49-201ENST00000329758 ABCC1P33527 1531 aa9.79□□□□□ -0.84
TRIM49-201ENST00000329758 MAST1Q9Y2H9 1570 aa9.79□□□□□ -0.84
TRIM49-201ENST00000329758 ABCA9Q8IUA7 1624 aa9.78□□□□□ -0.84
TRIM49-201ENST00000329758 KIAA1107Q9UPP5 1409 aa9.78□□□□□ -0.84
TRIM49-201ENST00000329758 PLCH2O75038 1416 aa9.77□□□□□ -0.85
TRIM49-201ENST00000329758 PLXNC1O60486 1568 aa9.77□□□□□ -0.85
TRIM49-201ENST00000329758 TAF7LQ5H9L4 462 aa9.77□□□□□ -0.85
TRIM49-201ENST00000329758 SENP3-EIF4A1A0A087X0R7 540 aa9.76□□□□□ -0.85
TRIM49-201ENST00000329758 RGL3Q3MIN7 710 aa9.76□□□□□ -0.85
TRIM49-201ENST00000329758 BCL11BQ9C0K0 894 aaPredicted RBP9.76□□□□□ -0.85
TRIM49-201ENST00000329758 VIRMAQ69YN4 1812 aaKnown RBP9.76□□□□□ -0.85
TRIM49-201ENST00000329758 ASXL2Q76L83 1435 aa9.76□□□□□ -0.85
TRIM49-201ENST00000329758 KDM5DQ9BY66 1539 aa9.75□□□□□ -0.85
TRIM49-201ENST00000329758 ARAP3Q8WWN8 1544 aa9.74□□□□□ -0.85
TRIM49-201ENST00000329758 KIF7Q2M1P5 1343 aa9.74□□□□□ -0.85
TRIM49-201ENST00000329758 TRAPPC8Q9Y2L5 1435 aa9.74□□□□□ -0.85
TRIM49-201ENST00000329758 PLEKHH2Q8IVE3 1493 aa9.74□□□□□ -0.85
TRIM49-201ENST00000329758 UNC13BO14795 1591 aa9.74□□□□□ -0.85
TRIM49-201ENST00000329758 CCDC7Q96M83 1385 aa9.74□□□□□ -0.85
TRIM49-201ENST00000329758 AFAP1Q8N556 730 aa9.73□□□□□ -0.85
TRIM49-201ENST00000329758 ZFYVE16Q7Z3T8 1539 aa9.73□□□□□ -0.85
TRIM49-201ENST00000329758 FRAT2O75474 233 aaPredicted RBP9.73□□□□□ -0.85
TRIM49-201ENST00000329758 MAP7D2Q96T17 732 aa9.72□□□□□ -0.85
TRIM49-201ENST00000329758 FANCAO15360 1455 aa9.72□□□□□ -0.85
TRIM49-201ENST00000329758 INO80Q9ULG1 1556 aaPredicted RBP9.71□□□□□ -0.86
TRIM49-201ENST00000329758 FAM135AQ9P2D6 1515 aa9.71□□□□□ -0.86
TRIM49-201ENST00000329758 SPATA31E1Q6ZUB1 1445 aa9.71□□□□□ -0.86
TRIM49-201ENST00000329758 PRKRIP1Q9H875 184 aaPredicted RBP9.71□□□□□ -0.86
TRIM49-201ENST00000329758 MRS2Q9HD23 443 aa9.71□□□□□ -0.86
TRIM49-201ENST00000329758 USP47Q96K76 1375 aa9.7□□□□□ -0.86
TRIM49-201ENST00000329758 NCLP19338 710 aaKnown RBP9.7□□□□□ -0.86
TRIM49-201ENST00000329758 EFCAB2Q5VUJ9 269 aa9.7□□□□□ -0.86
TRIM49-201ENST00000329758 SMAP1Q8IYB5 467 aaPredicted RBP9.7□□□□□ -0.86
TRIM49-201ENST00000329758 RIMBP3CA6NJZ7 1639 aa9.7□□□□□ -0.86
TRIM49-201ENST00000329758 RIMBP3BA6NNM3 1639 aa9.7□□□□□ -0.86
TRIM49-201ENST00000329758 RIMBP3Q9UFD9 1639 aa9.7□□□□□ -0.86
TRIM49-201ENST00000329758 FAM9BQ8IZU0 186 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms