RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 HECW1Q76N89 1606 aa21.04■□□□□ 0.96
SYNM-201ENST00000328642 SCAPERQ9BY12 1400 aa21.03■□□□□ 0.96
SYNM-201ENST00000328642 U2AF1L5P0DN76 240 aaPredicted RBP21.02■□□□□ 0.96
SYNM-201ENST00000328642 U2AF1Q01081 240 aaKnown RBP eCLIP21.02■□□□□ 0.96
SYNM-201ENST00000328642 RALBP1Q15311 655 aa21.02■□□□□ 0.96
SYNM-201ENST00000328642 RCAN3Q9UKA8 241 aa21.01■□□□□ 0.95
SYNM-201ENST00000328642 PTPN23Q9H3S7 1636 aa21.01■□□□□ 0.95
SYNM-201ENST00000328642 KIF21AQ7Z4S6 1674 aa21.01■□□□□ 0.95
SYNM-201ENST00000328642 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.01■□□□□ 0.95
SYNM-201ENST00000328642 MINK1Q8N4C8 1332 aaPredicted RBP20.99■□□□□ 0.95
SYNM-201ENST00000328642 MAPKBP1O60336 1514 aa20.98■□□□□ 0.95
SYNM-201ENST00000328642 NUDCQ9Y266 331 aa20.97■□□□□ 0.95
SYNM-201ENST00000328642 ANKRD30BQ9BXX2 1392 aa20.96■□□□□ 0.95
SYNM-201ENST00000328642 KIAA1107Q9UPP5 1409 aa20.96■□□□□ 0.95
SYNM-201ENST00000328642 MAPK8IP3Q9UPT6 1336 aa20.95■□□□□ 0.94
SYNM-201ENST00000328642 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.95■□□□□ 0.94
SYNM-201ENST00000328642 CLUAP1Q96AJ1 413 aa20.95■□□□□ 0.94
SYNM-201ENST00000328642 MAGI1Q96QZ7 1491 aaPredicted RBP20.94■□□□□ 0.94
SYNM-201ENST00000328642 BCL2L13Q9BXK5 485 aa20.94■□□□□ 0.94
SYNM-201ENST00000328642 NCOA1Q15788 1441 aa20.94■□□□□ 0.94
SYNM-201ENST00000328642 MYBBP1AQ9BQG0 1328 aaKnown RBP20.94■□□□□ 0.94
SYNM-201ENST00000328642 CAMSAP2Q08AD1 1489 aa20.94■□□□□ 0.94
SYNM-201ENST00000328642 CDCA7LQ96GN5 454 aa20.94■□□□□ 0.94
SYNM-201ENST00000328642 MAP3K1Q13233 1512 aa20.93■□□□□ 0.94
SYNM-201ENST00000328642 NUP153P49790 1475 aaKnown RBP20.92■□□□□ 0.94
SYNM-201ENST00000328642 CNTLNQ9NXG0 1405 aa20.92■□□□□ 0.94
SYNM-201ENST00000328642 ARXQ96QS3 562 aa20.92■□□□□ 0.94
SYNM-201ENST00000328642 APAF1O14727 1248 aa20.91■□□□□ 0.94
SYNM-201ENST00000328642 FTSJ3Q8IY81 847 aaKnown RBP20.88■□□□□ 0.93
SYNM-201ENST00000328642 EXOC6Q8TAG9 804 aa20.88■□□□□ 0.93
SYNM-201ENST00000328642 GPATCH8Q9UKJ3 1502 aaKnown RBP20.87■□□□□ 0.93
SYNM-201ENST00000328642 CABP2Q9NPB3 220 aa20.87■□□□□ 0.93
SYNM-201ENST00000328642 ATP10BO94823 1461 aa20.86■□□□□ 0.93
SYNM-201ENST00000328642 A0A0G2JS52 829 aa20.85■□□□□ 0.93
SYNM-201ENST00000328642 ZBED9Q6R2W3 1325 aa20.85■□□□□ 0.93
SYNM-201ENST00000328642 SLC12A5Q9H2X9 1139 aa20.85■□□□□ 0.93
SYNM-201ENST00000328642 ADAMTS8Q9UP79 889 aa20.85■□□□□ 0.93
SYNM-201ENST00000328642 ELL2O00472 640 aaPredicted RBP20.83■□□□□ 0.92
SYNM-201ENST00000328642 PAK3O75914 559 aaPredicted RBP20.83■□□□□ 0.92
SYNM-201ENST00000328642 AKNAQ7Z591 1439 aa20.82■□□□□ 0.92
SYNM-201ENST00000328642 GOLGA2Q08379 1002 aa20.82■□□□□ 0.92
SYNM-201ENST00000328642 GGNBP2Q9H3C7 697 aa20.81■□□□□ 0.92
SYNM-201ENST00000328642 PLEKHH2Q8IVE3 1493 aa20.8■□□□□ 0.92
SYNM-201ENST00000328642 VGFO15240 615 aaPredicted RBP20.8■□□□□ 0.92
SYNM-201ENST00000328642 ROCK1Q13464 1354 aa20.8■□□□□ 0.92
SYNM-201ENST00000328642 HDGFL2Q7Z4V5 671 aaPredicted RBP20.8■□□□□ 0.92
SYNM-201ENST00000328642 UGGT2Q9NYU1 1516 aa20.78■□□□□ 0.92
SYNM-201ENST00000328642 TCERG1O14776 1098 aaKnown RBP20.78■□□□□ 0.92
SYNM-201ENST00000328642 CENPJQ9HC77 1338 aaPredicted RBP20.77■□□□□ 0.92
SYNM-201ENST00000328642 EIF3AQ14152 1382 aaKnown RBP20.77■□□□□ 0.91
SYNM-201ENST00000328642 CTTNBP2Q8WZ74 1663 aa20.76■□□□□ 0.91
SYNM-201ENST00000328642 MAGI3Q5TCQ9 1506 aa20.76■□□□□ 0.91
SYNM-201ENST00000328642 PNISRQ8TF01 805 aaKnown RBP20.75■□□□□ 0.91
SYNM-201ENST00000328642 UPF2Q9HAU5 1272 aaKnown RBP20.75■□□□□ 0.91
SYNM-201ENST00000328642 LTV1Q96GA3 475 aaPredicted RBP20.74■□□□□ 0.91
SYNM-201ENST00000328642 DISP1Q96F81 1524 aa20.74■□□□□ 0.91
SYNM-201ENST00000328642 HSP90AA1P07900 732 aaKnown RBP20.74■□□□□ 0.91
SYNM-201ENST00000328642 APBB1O00213 710 aa20.74■□□□□ 0.91
SYNM-201ENST00000328642 ADAMTS12P58397 1594 aa20.74■□□□□ 0.91
SYNM-201ENST00000328642 CRBNQ96SW2 442 aa20.73■□□□□ 0.91
SYNM-201ENST00000328642 CCDC141Q6ZP82 1450 aa20.72■□□□□ 0.91
SYNM-201ENST00000328642 ANP32EQ9BTT0 268 aa20.71■□□□□ 0.91
SYNM-201ENST00000328642 EIF4G3O43432 1585 aaKnown RBP20.71■□□□□ 0.91
SYNM-201ENST00000328642 TERF2IPQ9NYB0 399 aa20.7■□□□□ 0.91
SYNM-201ENST00000328642 FBXO31Q5XUX0 539 aaPredicted RBP20.7■□□□□ 0.9
SYNM-201ENST00000328642 ADGRF5Q8IZF2 1346 aa20.7■□□□□ 0.9
SYNM-201ENST00000328642 RAPGEF6Q8TEU7 1601 aa20.69■□□□□ 0.9
SYNM-201ENST00000328642 RRP1P56182 461 aaKnown RBP20.69■□□□□ 0.9
SYNM-201ENST00000328642 RPRD2Q5VT52 1461 aaKnown RBP20.69■□□□□ 0.9
SYNM-201ENST00000328642 MTHFSP49914 203 aa20.68■□□□□ 0.9
SYNM-201ENST00000328642 PPP2R1AP30153 589 aa20.68■□□□□ 0.9
SYNM-201ENST00000328642 EVC2Q86UK5 1308 aa20.67■□□□□ 0.9
SYNM-201ENST00000328642 SPRYD3Q8NCJ5 442 aa20.67■□□□□ 0.9
SYNM-201ENST00000328642 COG6Q9Y2V7 657 aa20.67■□□□□ 0.9
SYNM-201ENST00000328642 ABCA5Q8WWZ7 1642 aa20.67■□□□□ 0.9
SYNM-201ENST00000328642 WDR62O43379 1518 aa20.66■□□□□ 0.9
SYNM-201ENST00000328642 SKAP1Q86WV1 359 aa20.66■□□□□ 0.9
SYNM-201ENST00000328642 NGDNQ8NEJ9 315 aaKnown RBP20.66■□□□□ 0.9
SYNM-201ENST00000328642 PRAM1Q96QH2 718 aa20.66■□□□□ 0.9
SYNM-201ENST00000328642 KIAA0556O60303 1618 aa20.65■□□□□ 0.9
SYNM-201ENST00000328642 HMOX1P09601 288 aa20.65■□□□□ 0.9
SYNM-201ENST00000328642 HDGFP51858 240 aaKnown RBP20.65■□□□□ 0.9
SYNM-201ENST00000328642 NUTM2GQ5VZR2 741 aa20.64■□□□□ 0.9
SYNM-201ENST00000328642 KIF14Q15058 1648 aa20.63■□□□□ 0.89
SYNM-201ENST00000328642 TXNDC2Q86VQ3 553 aa20.63■□□□□ 0.89
SYNM-201ENST00000328642 SMC4Q9NTJ3 1288 aa20.63■□□□□ 0.89
SYNM-201ENST00000328642 ITPRIPQ8IWB1 547 aa20.63■□□□□ 0.89
SYNM-201ENST00000328642 CGNL1Q0VF96 1302 aa20.63■□□□□ 0.89
SYNM-201ENST00000328642 MYH16Q9H6N6 1097 aa20.62■□□□□ 0.89
SYNM-201ENST00000328642 HAP1P54257 671 aaPredicted RBP20.61■□□□□ 0.89
SYNM-201ENST00000328642 SLC4A3P48751 1232 aa20.61■□□□□ 0.89
SYNM-201ENST00000328642 NOP58Q9Y2X3 529 aaKnown RBP20.61■□□□□ 0.89
SYNM-201ENST00000328642 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
SYNM-201ENST00000328642 TRAPPC8Q9Y2L5 1435 aa20.6■□□□□ 0.89
SYNM-201ENST00000328642 CFAP43Q8NDM7 1665 aa20.6■□□□□ 0.89
SYNM-201ENST00000328642 ERBINQ96RT1 1412 aa20.6■□□□□ 0.89
SYNM-201ENST00000328642 SLC26A8Q96RN1 970 aa20.6■□□□□ 0.89
SYNM-201ENST00000328642 CD109Q6YHK3 1445 aa20.59■□□□□ 0.89
SYNM-201ENST00000328642 PDE3BQ13370 1112 aa20.59■□□□□ 0.89
SYNM-201ENST00000328642 IDI1Q13907 227 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms