RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 PSEN2P49810 448 aa4.18□□□□□ -1.74
CCDC144A-201ENST00000328495 NBR1Q14596 966 aa4.18□□□□□ -1.74
CCDC144A-201ENST00000328495 SPNS2Q8IVW8 549 aa4.18□□□□□ -1.74
CCDC144A-201ENST00000328495 KDM2AQ9Y2K7 1162 aa4.18□□□□□ -1.74
CCDC144A-201ENST00000328495 GRXCR2A6NFK2 248 aa4.17□□□□□ -1.74
CCDC144A-201ENST00000328495 TK2O00142 265 aa4.17□□□□□ -1.74
CCDC144A-201ENST00000328495 DMRTA1Q5VZB9 504 aa4.16□□□□□ -1.74
CCDC144A-201ENST00000328495 ADGRD1Q6QNK2 874 aa4.16□□□□□ -1.74
CCDC144A-201ENST00000328495 PPP1R3GB7ZBB8 358 aa4.16□□□□□ -1.74
CCDC144A-201ENST00000328495 MAP3K7O43318 606 aa4.16□□□□□ -1.74
CCDC144A-201ENST00000328495 EN1Q05925 392 aaPredicted RBP4.16□□□□□ -1.74
CCDC144A-201ENST00000328495 RBM33Q96EV2 1170 aaKnown RBP4.16□□□□□ -1.74
CCDC144A-201ENST00000328495 SLC4A5Q9BY07 1137 aa4.15□□□□□ -1.74
CCDC144A-201ENST00000328495 C6orf132Q5T0Z8 1188 aa4.15□□□□□ -1.75
CCDC144A-201ENST00000328495 MMRN1Q13201 1228 aa4.14□□□□□ -1.75
CCDC144A-201ENST00000328495 STAC3Q96MF2 364 aa4.14□□□□□ -1.75
CCDC144A-201ENST00000328495 ZBED2Q9BTP6 218 aa4.14□□□□□ -1.75
CCDC144A-201ENST00000328495 MYT1LQ9UL68 1186 aa4.14□□□□□ -1.75
CCDC144A-201ENST00000328495 VPS9D1Q9Y2B5 631 aa4.14□□□□□ -1.75
CCDC144A-201ENST00000328495 OSBPP22059 807 aa4.13□□□□□ -1.75
CCDC144A-201ENST00000328495 MLLT3P42568 568 aaPredicted RBP4.13□□□□□ -1.75
CCDC144A-201ENST00000328495 SEMA3EO15041 775 aa4.13□□□□□ -1.75
CCDC144A-201ENST00000328495 COL9A1P20849 921 aa4.13□□□□□ -1.75
CCDC144A-201ENST00000328495 TSR1Q2NL82 804 aaKnown RBP4.13□□□□□ -1.75
CCDC144A-201ENST00000328495 CERKQ8TCT0 537 aa4.13□□□□□ -1.75
CCDC144A-201ENST00000328495 RNF166Q96A37 237 aaPredicted RBP4.13□□□□□ -1.75
CCDC144A-201ENST00000328495 NBPF3Q9H094 633 aa4.13□□□□□ -1.75
CCDC144A-201ENST00000328495 HRO43593 1189 aa4.12□□□□□ -1.75
CCDC144A-201ENST00000328495 SMYD5Q6GMV2 418 aa4.12□□□□□ -1.75
CCDC144A-201ENST00000328495 PRIM1P49642 420 aaKnown RBP4.11□□□□□ -1.75
CCDC144A-201ENST00000328495 PROX2Q3B8N5 592 aa4.11□□□□□ -1.75
CCDC144A-201ENST00000328495 RABGEF1Q9UJ41 708 aa4.11□□□□□ -1.75
CCDC144A-201ENST00000328495 TESPA1A2RU30 521 aaPredicted RBP4.11□□□□□ -1.75
CCDC144A-201ENST00000328495 ONECUT3O60422 494 aaPredicted RBP4.11□□□□□ -1.75
CCDC144A-201ENST00000328495 IFFO2Q5TF58 517 aa4.11□□□□□ -1.75
CCDC144A-201ENST00000328495 TRIM6-TRIM34B2RNG4 842 aa4.1□□□□□ -1.75
CCDC144A-201ENST00000328495 MRPL50Q8N5N7 158 aaKnown RBP4.1□□□□□ -1.75
CCDC144A-201ENST00000328495 CDHR5Q9HBB8 845 aa4.1□□□□□ -1.75
CCDC144A-201ENST00000328495 GOLGA8CPA6NN73 597 aa4.1□□□□□ -1.75
CCDC144A-201ENST00000328495 TULP1O00294 542 aaPredicted RBP4.1□□□□□ -1.75
CCDC144A-201ENST00000328495 BHMG1C9JSJ3 638 aaPredicted RBP4.09□□□□□ -1.75
CCDC144A-201ENST00000328495 PRSS12P56730 875 aa4.09□□□□□ -1.75
CCDC144A-201ENST00000328495 PACS2Q86VP3 889 aa4.09□□□□□ -1.75
CCDC144A-201ENST00000328495 FBXO41Q8TF61 875 aa4.09□□□□□ -1.75
CCDC144A-201ENST00000328495 RBM27Q9P2N5 1060 aaKnown RBP4.09□□□□□ -1.75
CCDC144A-201ENST00000328495 CDCA7LQ96GN5 454 aa4.09□□□□□ -1.76
CCDC144A-201ENST00000328495 KIAA1468Q9P260 1216 aa4.09□□□□□ -1.76
CCDC144A-201ENST00000328495 NUTM2FA1L443 756 aa4.08□□□□□ -1.76
CCDC144A-201ENST00000328495 LAPTM4BQ86VI4 370 aa4.08□□□□□ -1.76
CCDC144A-201ENST00000328495 NBPF26B4DH59 902 aa4.08□□□□□ -1.76
CCDC144A-201ENST00000328495 KCTD12Q96CX2 325 aaKnown RBP4.08□□□□□ -1.76
CCDC144A-201ENST00000328495 TSKSQ9UJT2 592 aa4.08□□□□□ -1.76
CCDC144A-201ENST00000328495 SLC24A1O60721 1099 aa4.07□□□□□ -1.76
CCDC144A-201ENST00000328495 FCHSD2O94868 740 aa4.06□□□□□ -1.76
CCDC144A-201ENST00000328495 PTGDRQ13258 359 aa4.06□□□□□ -1.76
CCDC144A-201ENST00000328495 FAM98CQ17RN3 349 aaKnown RBP4.06□□□□□ -1.76
CCDC144A-201ENST00000328495 ANKK1Q8NFD2 765 aa4.06□□□□□ -1.76
CCDC144A-201ENST00000328495 WNT2BQ93097 391 aa4.06□□□□□ -1.76
CCDC144A-201ENST00000328495 NPDC1Q9NQX5 325 aaPredicted RBP4.06□□□□□ -1.76
CCDC144A-201ENST00000328495 SEPT9Q9UHD8 586 aaPredicted RBP4.06□□□□□ -1.76
CCDC144A-201ENST00000328495 PADI6Q6TGC4 694 aa4.06□□□□□ -1.76
CCDC144A-201ENST00000328495 RBM26Q5T8P6 1007 aaKnown RBP4.06□□□□□ -1.76
CCDC144A-201ENST00000328495 HCSTQ9UBK5 93 aa4.06□□□□□ -1.76
CCDC144A-201ENST00000328495 PNMA3Q9UL41 463 aa4.05□□□□□ -1.76
CCDC144A-201ENST00000328495 TATDN2Q93075 761 aa4.05□□□□□ -1.76
CCDC144A-201ENST00000328495 ZFRQ96KR1 1074 aaKnown RBP4.05□□□□□ -1.76
CCDC144A-201ENST00000328495 FAM198AQ9UFP1 575 aa4.05□□□□□ -1.76
CCDC144A-201ENST00000328495 HIC1Q14526 733 aa4.05□□□□□ -1.76
CCDC144A-201ENST00000328495 THSD4Q6ZMP0 1018 aa4.05□□□□□ -1.76
CCDC144A-201ENST00000328495 SPATA31D1Q6ZQQ2 1576 aa4.05□□□□□ -1.76
CCDC144A-201ENST00000328495 GPIHBP1Q8IV16 184 aa4.05□□□□□ -1.76
CCDC144A-201ENST00000328495 TTC13Q8NBP0 860 aa4.05□□□□□ -1.76
CCDC144A-201ENST00000328495 SMAPO00193 183 aa4.03□□□□□ -1.76
CCDC144A-201ENST00000328495 NUDT18Q6ZVK8 323 aa4.03□□□□□ -1.76
CCDC144A-201ENST00000328495 LRCH3Q96II8 777 aa4.03□□□□□ -1.76
CCDC144A-201ENST00000328495 PTPN5P54829 565 aa4.03□□□□□ -1.76
CCDC144A-201ENST00000328495 SOWAHBA6NEL2 793 aa4.03□□□□□ -1.76
CCDC144A-201ENST00000328495 HDGFP51858 240 aaKnown RBP4.03□□□□□ -1.76
CCDC144A-201ENST00000328495 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.03□□□□□ -1.76
CCDC144A-201ENST00000328495 GNPATO15228 680 aa4.02□□□□□ -1.77
CCDC144A-201ENST00000328495 RBM46Q8TBY0 533 aaKnown RBP4.02□□□□□ -1.77
CCDC144A-201ENST00000328495 BCAMP50895 628 aa4.02□□□□□ -1.77
CCDC144A-201ENST00000328495 GPR37O15354 613 aa4.02□□□□□ -1.77
CCDC144A-201ENST00000328495 ADGRG1Q9Y653 693 aa4.02□□□□□ -1.77
CCDC144A-201ENST00000328495 C3orf80F5H4A9 247 aa4.01□□□□□ -1.77
CCDC144A-201ENST00000328495 SLC4A3P48751 1232 aa4.01□□□□□ -1.77
CCDC144A-201ENST00000328495 SAMD7Q7Z3H4 446 aa4.01□□□□□ -1.77
CCDC144A-201ENST00000328495 OATP04181 439 aa4□□□□□ -1.77
CCDC144A-201ENST00000328495 DNAJB2P25686 324 aa4□□□□□ -1.77
CCDC144A-201ENST00000328495 LMOD2Q6P5Q4 547 aa4□□□□□ -1.77
CCDC144A-201ENST00000328495 NYAP1Q6ZVC0 841 aa4□□□□□ -1.77
CCDC144A-201ENST00000328495 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4□□□□□ -1.77
CCDC144A-201ENST00000328495 NECTIN2Q92692 538 aa4□□□□□ -1.77
CCDC144A-201ENST00000328495 TSR3Q9UJK0 312 aaKnown RBP4□□□□□ -1.77
CCDC144A-201ENST00000328495 HPS5Q9UPZ3 1129 aa4□□□□□ -1.77
CCDC144A-201ENST00000328495 EYA1Q99502 592 aa4□□□□□ -1.77
CCDC144A-201ENST00000328495 RNF40O75150 1001 aa4□□□□□ -1.77
CCDC144A-201ENST00000328495 SLF2Q8IX21 1173 aa3.99□□□□□ -1.77
CCDC144A-201ENST00000328495 PPP4CP60510 307 aa3.99□□□□□ -1.77
CCDC144A-201ENST00000328495 SWT1Q5T5J6 900 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms