RNA–Protein interactions for RNA: ENST00000325823.11

PDXDC1-201, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5 BASIC

Gene PDXDC1, Length 1,113 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-201ENST00000325823 NCOA1Q15788 1441 aa10.59□□□□□ -0.71
PDXDC1-201ENST00000325823 CIZ1Q9ULV3 898 aaPredicted RBP10.59□□□□□ -0.71
PDXDC1-201ENST00000325823 ZNF644Q9H582 1327 aaPredicted RBP10.58□□□□□ -0.71
PDXDC1-201ENST00000325823 KDM6BO15054 1643 aa10.58□□□□□ -0.72
PDXDC1-201ENST00000325823 CDC42BPAQ5VT25 1732 aa10.58□□□□□ -0.72
PDXDC1-201ENST00000325823 RSPH4AQ5TD94 716 aa10.58□□□□□ -0.72
PDXDC1-201ENST00000325823 ARHGEF5Q12774 1597 aa10.57□□□□□ -0.72
PDXDC1-201ENST00000325823 DENND4BO75064 1496 aaPredicted RBP10.56□□□□□ -0.72
PDXDC1-201ENST00000325823 HS6ST3Q8IZP7 471 aa10.56□□□□□ -0.72
PDXDC1-201ENST00000325823 ZNF777Q9ULD5 760 aaPredicted RBP10.56□□□□□ -0.72
PDXDC1-201ENST00000325823 ABCC2Q92887 1545 aa10.56□□□□□ -0.72
PDXDC1-201ENST00000325823 CLASP1Q7Z460 1538 aa10.55□□□□□ -0.72
PDXDC1-201ENST00000325823 TSPY4P0CV99 314 aa10.55□□□□□ -0.72
PDXDC1-201ENST00000325823 TSPY10P0CW01 314 aa10.55□□□□□ -0.72
PDXDC1-201ENST00000325823 UHRF1BP1LA0JNW5 1464 aa10.55□□□□□ -0.72
PDXDC1-201ENST00000325823 ANKRD30BQ9BXX2 1392 aa10.54□□□□□ -0.72
PDXDC1-201ENST00000325823 PREX2Q70Z35 1606 aa10.54□□□□□ -0.72
PDXDC1-201ENST00000325823 RPRD2Q5VT52 1461 aaKnown RBP10.54□□□□□ -0.72
PDXDC1-201ENST00000325823 KDM5BQ9UGL1 1544 aa10.53□□□□□ -0.72
PDXDC1-201ENST00000325823 C9orf84Q5VXU9 1444 aa10.53□□□□□ -0.72
PDXDC1-201ENST00000325823 PLEKHH2Q8IVE3 1493 aa10.53□□□□□ -0.72
PDXDC1-201ENST00000325823 ANKRD50Q9ULJ7 1429 aa10.52□□□□□ -0.73
PDXDC1-201ENST00000325823 AKT1S1Q96B36 256 aa10.52□□□□□ -0.73
PDXDC1-201ENST00000325823 PZPP20742 1482 aa10.51□□□□□ -0.73
PDXDC1-201ENST00000325823 CCDC141Q6ZP82 1450 aa10.51□□□□□ -0.73
PDXDC1-201ENST00000325823 OSCARQ8IYS5 282 aa10.51□□□□□ -0.73
PDXDC1-201ENST00000325823 YTHDC1Q96MU7 727 aaKnown RBP10.51□□□□□ -0.73
PDXDC1-201ENST00000325823 KIAA1107Q9UPP5 1409 aa10.5□□□□□ -0.73
PDXDC1-201ENST00000325823 KDM5DQ9BY66 1539 aa10.5□□□□□ -0.73
PDXDC1-201ENST00000325823 MAST1Q9Y2H9 1570 aa10.5□□□□□ -0.73
PDXDC1-201ENST00000325823 MBD5Q9P267 1494 aa10.49□□□□□ -0.73
PDXDC1-201ENST00000325823 GSE1Q14687 1217 aa10.49□□□□□ -0.73
PDXDC1-201ENST00000325823 CDC42BPBQ9Y5S2 1711 aa10.49□□□□□ -0.73
PDXDC1-201ENST00000325823 SAMD9LQ8IVG5 1584 aa10.48□□□□□ -0.73
PDXDC1-201ENST00000325823 EIF4G2P78344 907 aaKnown RBP eCLIP10.48□□□□□ -0.73
PDXDC1-201ENST00000325823 DDX10Q13206 875 aaKnown RBP10.48□□□□□ -0.73
PDXDC1-201ENST00000325823 L3MBTL2Q969R5 705 aa10.48□□□□□ -0.73
PDXDC1-201ENST00000325823 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.48□□□□□ -0.732e-7■■■■■ 47.7
PDXDC1-201ENST00000325823 MYO5CQ9NQX4 1742 aa10.47□□□□□ -0.73
PDXDC1-201ENST00000325823 CCER2I3L3R5 266 aa10.47□□□□□ -0.73
PDXDC1-201ENST00000325823 GTF3C3Q9Y5Q9 886 aa10.47□□□□□ -0.73
PDXDC1-201ENST00000325823 ARHGAP5Q13017 1502 aa10.47□□□□□ -0.73
PDXDC1-201ENST00000325823 ERCC6L2Q5T890 1561 aa10.47□□□□□ -0.73
PDXDC1-201ENST00000325823 ANP32CO43423 234 aa10.46□□□□□ -0.73
PDXDC1-201ENST00000325823 HNRNPMP52272 730 aaKnown RBP eCLIP10.46□□□□□ -0.73
PDXDC1-201ENST00000325823 ERICH6Q7L0X2 663 aa10.46□□□□□ -0.73
PDXDC1-201ENST00000325823 KIF15Q9NS87 1388 aa10.46□□□□□ -0.74
PDXDC1-201ENST00000325823 TEX14Q8IWB6 1497 aa10.46□□□□□ -0.74
PDXDC1-201ENST00000325823 ZCCHC11Q5TAX3 1644 aaKnown RBP10.45□□□□□ -0.74
PDXDC1-201ENST00000325823 TTC37Q6PGP7 1564 aa10.45□□□□□ -0.74
PDXDC1-201ENST00000325823 ARAP3Q8WWN8 1544 aa10.45□□□□□ -0.74
PDXDC1-201ENST00000325823 PLCH2O75038 1416 aa10.45□□□□□ -0.74
PDXDC1-201ENST00000325823 NUP155O75694 1391 aa10.45□□□□□ -0.74
PDXDC1-201ENST00000325823 EFCAB2Q5VUJ9 269 aa10.44□□□□□ -0.74
PDXDC1-201ENST00000325823 CHRDL2Q6WN34 429 aa10.44□□□□□ -0.74
PDXDC1-201ENST00000325823 PLXNC1O60486 1568 aa10.43□□□□□ -0.74
PDXDC1-201ENST00000325823 HSPA5P11021 654 aaKnown RBP10.43□□□□□ -0.74
PDXDC1-201ENST00000325823 SYCP2Q9BX26 1530 aa10.43□□□□□ -0.74
PDXDC1-201ENST00000325823 ARHGEF12Q9NZN5 1544 aa10.42□□□□□ -0.74
PDXDC1-201ENST00000325823 DUOX2Q9NRD8 1548 aa10.41□□□□□ -0.74
PDXDC1-201ENST00000325823 UNC13BO14795 1591 aa10.4□□□□□ -0.74
PDXDC1-201ENST00000325823 HIRIP3Q9BW71 556 aaPredicted RBP10.4□□□□□ -0.74
PDXDC1-201ENST00000325823 UHRF1BP1Q6BDS2 1440 aa10.4□□□□□ -0.75
PDXDC1-201ENST00000325823 KCNH8Q96L42 1107 aa10.39□□□□□ -0.75
PDXDC1-201ENST00000325823 RTEL1-TNFRSF6BF6WH68 1400 aa10.39□□□□□ -0.75
PDXDC1-201ENST00000325823 ERBINQ96RT1 1412 aa10.39□□□□□ -0.75
PDXDC1-201ENST00000325823 ABCC1P33527 1531 aa10.38□□□□□ -0.75
PDXDC1-201ENST00000325823 FAM135AQ9P2D6 1515 aa10.38□□□□□ -0.75
PDXDC1-201ENST00000325823 NBPF8Q3BBV2 869 aa10.38□□□□□ -0.75
PDXDC1-201ENST00000325823 ARID4BQ4LE39 1312 aaPredicted RBP10.37□□□□□ -0.75
PDXDC1-201ENST00000325823 WDR7Q9Y4E6 1490 aa10.37□□□□□ -0.75
PDXDC1-201ENST00000325823 RIOK3O14730 519 aaKnown RBP10.37□□□□□ -0.75
PDXDC1-201ENST00000325823 SPATA31E1Q6ZUB1 1445 aa10.37□□□□□ -0.75
PDXDC1-201ENST00000325823 RYDENQ9NUL5 291 aaKnown RBP10.37□□□□□ -0.75
PDXDC1-201ENST00000325823 IQGAP3Q86VI3 1631 aa10.36□□□□□ -0.75
PDXDC1-201ENST00000325823 WASHC2AQ641Q2 1341 aa10.36□□□□□ -0.75
PDXDC1-201ENST00000325823 POLR1AO95602 1720 aaPredicted RBP10.36□□□□□ -0.75
PDXDC1-201ENST00000325823 CNTLNQ9NXG0 1405 aa10.36□□□□□ -0.75
PDXDC1-201ENST00000325823 REM2Q8IYK8 340 aaPredicted RBP10.36□□□□□ -0.75
PDXDC1-201ENST00000325823 CCDC7Q96M83 1385 aa10.36□□□□□ -0.75
PDXDC1-201ENST00000325823 RNF25Q96BH1 459 aaPredicted RBP10.35□□□□□ -0.75
PDXDC1-201ENST00000325823 MAGI2Q86UL8 1455 aa10.35□□□□□ -0.75
PDXDC1-201ENST00000325823 RALGAPBQ86X10 1494 aa10.35□□□□□ -0.75
PDXDC1-201ENST00000325823 ABCA9Q8IUA7 1624 aa10.34□□□□□ -0.75
PDXDC1-201ENST00000325823 ATP10AO60312 1499 aa10.34□□□□□ -0.75
PDXDC1-201ENST00000325823 CCDC144AA2RUR9 1427 aa10.33□□□□□ -0.76
PDXDC1-201ENST00000325823 GTPBP6O43824 516 aaPredicted RBP10.33□□□□□ -0.76
PDXDC1-201ENST00000325823 SPAG9O60271 1321 aaKnown RBP10.33□□□□□ -0.76
PDXDC1-201ENST00000325823 PELP1Q8IZL8 1130 aaKnown RBP10.32□□□□□ -0.76
PDXDC1-201ENST00000325823 ROCK2O75116 1388 aaKnown RBP10.31□□□□□ -0.76
PDXDC1-201ENST00000325823 USP47Q96K76 1375 aa10.31□□□□□ -0.76
PDXDC1-201ENST00000325823 VGFO15240 615 aaPredicted RBP10.31□□□□□ -0.76
PDXDC1-201ENST00000325823 NUBP1P53384 320 aa10.31□□□□□ -0.76
PDXDC1-201ENST00000325823 NKX1-1Q15270 411 aaPredicted RBP10.31□□□□□ -0.76
PDXDC1-201ENST00000325823 TRAPPC8Q9Y2L5 1435 aa10.31□□□□□ -0.76
PDXDC1-201ENST00000325823 STAC3Q96MF2 364 aa10.3□□□□□ -0.76
PDXDC1-201ENST00000325823 KDM5CP41229 1560 aa10.3□□□□□ -0.76
PDXDC1-201ENST00000325823 FANCAO15360 1455 aa10.3□□□□□ -0.76
PDXDC1-201ENST00000325823 ZFYVE16Q7Z3T8 1539 aa10.29□□□□□ -0.76
PDXDC1-201ENST00000325823 DCAF8Q5TAQ9 597 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms