RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 KDM5CP41229 1560 aa27.21■■□□□ 1.95
SOX2-201ENST00000325404 NPM1P06748 294 aaKnown RBP eCLIP27.21■■□□□ 1.95
SOX2-201ENST00000325404 RALGAPBQ86X10 1494 aa27.2■■□□□ 1.95
SOX2-201ENST00000325404 ROCK2O75116 1388 aaKnown RBP27.19■■□□□ 1.94
SOX2-201ENST00000325404 ABCC1P33527 1531 aa27.18■■□□□ 1.94
SOX2-201ENST00000325404 PPP4R2Q9NY27 417 aa27.18■■□□□ 1.94
SOX2-201ENST00000325404 FAM9BQ8IZU0 186 aa27.17■■□□□ 1.94
SOX2-201ENST00000325404 BCORL1Q5H9F3 1711 aa27.16■■□□□ 1.94
SOX2-201ENST00000325404 ABCA9Q8IUA7 1624 aa27.16■■□□□ 1.94
SOX2-201ENST00000325404 NUP155O75694 1391 aa27.14■■□□□ 1.93
SOX2-201ENST00000325404 PLXNC1O60486 1568 aa27.13■■□□□ 1.93
SOX2-201ENST00000325404 TRAPPC8Q9Y2L5 1435 aa27.09■■□□□ 1.93
SOX2-201ENST00000325404 FANCAO15360 1455 aa27.08■■□□□ 1.93
SOX2-201ENST00000325404 SMG6Q86US8 1419 aaKnown RBP27.08■■□□□ 1.93
SOX2-201ENST00000325404 FANCIQ9NVI1 1328 aa27.06■■□□□ 1.92
SOX2-201ENST00000325404 KTN1Q86UP2 1357 aaKnown RBP27.05■■□□□ 1.92
SOX2-201ENST00000325404 IRX6P78412 446 aaPredicted RBP27.05■■□□□ 1.92
SOX2-201ENST00000325404 DUOX2Q9NRD8 1548 aa27.04■■□□□ 1.92
SOX2-201ENST00000325404 SPAG9O60271 1321 aaKnown RBP27.02■■□□□ 1.92
SOX2-201ENST00000325404 RTEL1-TNFRSF6BF6WH68 1400 aa27■■□□□ 1.91
SOX2-201ENST00000325404 ERBINQ96RT1 1412 aa26.99■■□□□ 1.91
SOX2-201ENST00000325404 CARD11Q9BXL7 1154 aa26.99■■□□□ 1.91
SOX2-201ENST00000325404 ZNF326Q5BKZ1 582 aaKnown RBP26.98■■□□□ 1.91
SOX2-201ENST00000325404 AFAP1Q8N556 730 aa26.98■■□□□ 1.91
SOX2-201ENST00000325404 ADGRL1O94910 1474 aa26.98■■□□□ 1.91
SOX2-201ENST00000325404 UNC13BO14795 1591 aa26.98■■□□□ 1.91
SOX2-201ENST00000325404 FAM135AQ9P2D6 1515 aa26.98■■□□□ 1.91
SOX2-201ENST00000325404 RNF123Q5XPI4 1314 aa26.97■■□□□ 1.91
SOX2-201ENST00000325404 ZFYVE16Q7Z3T8 1539 aa26.96■■□□□ 1.91
SOX2-201ENST00000325404 SCAPERQ9BY12 1400 aa26.95■■□□□ 1.9
SOX2-201ENST00000325404 NUDCQ9Y266 331 aa26.94■■□□□ 1.9
SOX2-201ENST00000325404 PNISRQ8TF01 805 aaKnown RBP26.93■■□□□ 1.9
SOX2-201ENST00000325404 CD109Q6YHK3 1445 aa26.93■■□□□ 1.9
SOX2-201ENST00000325404 E9PCH4 1651 aa26.91■■□□□ 1.9
SOX2-201ENST00000325404 BRD4O60885 1362 aaPredicted RBP26.91■■□□□ 1.9
SOX2-201ENST00000325404 RALBP1Q15311 655 aa26.91■■□□□ 1.9
SOX2-201ENST00000325404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.9■■□□□ 1.9
SOX2-201ENST00000325404 LRPPRCP42704 1394 aaKnown RBP26.89■■□□□ 1.9
SOX2-201ENST00000325404 CYB5RLQ6IPT4 315 aa26.89■■□□□ 1.9
SOX2-201ENST00000325404 ATP7AQ04656 1500 aa26.89■■□□□ 1.89
SOX2-201ENST00000325404 MAGI2Q86UL8 1455 aa26.89■■□□□ 1.89
SOX2-201ENST00000325404 INO80Q9ULG1 1556 aaPredicted RBP26.88■■□□□ 1.89
SOX2-201ENST00000325404 RIMBP3CA6NJZ7 1639 aa26.88■■□□□ 1.89
SOX2-201ENST00000325404 RIMBP3BA6NNM3 1639 aa26.88■■□□□ 1.89
SOX2-201ENST00000325404 IQGAP3Q86VI3 1631 aa26.88■■□□□ 1.89
SOX2-201ENST00000325404 RIMBP3Q9UFD9 1639 aa26.88■■□□□ 1.89
SOX2-201ENST00000325404 ST20-MTHFSA0A0A6YYL1 179 aa26.87■■□□□ 1.89
SOX2-201ENST00000325404 CFAP74Q9C0B2 1584 aa26.87■■□□□ 1.89
SOX2-201ENST00000325404 DCAF11Q8TEB1 546 aa26.86■■□□□ 1.89
SOX2-201ENST00000325404 PRAG1Q86YV5 1406 aa26.86■■□□□ 1.89
SOX2-201ENST00000325404 MYBBP1AQ9BQG0 1328 aaKnown RBP26.86■■□□□ 1.89
SOX2-201ENST00000325404 LAMC1P11047 1609 aa26.85■■□□□ 1.89
SOX2-201ENST00000325404 TRPM1Q7Z4N2 1603 aa26.85■■□□□ 1.89
SOX2-201ENST00000325404 TMC1Q8TDI8 760 aa26.85■■□□□ 1.89
SOX2-201ENST00000325404 POLR3GLQ9BT43 218 aa26.85■■□□□ 1.89
SOX2-201ENST00000325404 GPRASP1Q5JY77 1395 aa26.85■■□□□ 1.89
SOX2-201ENST00000325404 CCDC144AA2RUR9 1427 aa26.84■■□□□ 1.89
SOX2-201ENST00000325404 MSH5O43196 834 aa26.83■■□□□ 1.89
SOX2-201ENST00000325404 MYT1LQ9UL68 1186 aa26.83■■□□□ 1.89
SOX2-201ENST00000325404 ZNF518AQ6AHZ1 1483 aa26.82■■□□□ 1.88
SOX2-201ENST00000325404 B4GALNT3Q6L9W6 998 aa26.81■■□□□ 1.88
SOX2-201ENST00000325404 KDM2AQ9Y2K7 1162 aa26.81■■□□□ 1.88
SOX2-201ENST00000325404 ATP10AO60312 1499 aa26.8■■□□□ 1.88
SOX2-201ENST00000325404 PLA2R1Q13018 1463 aa26.77■■□□□ 1.88
SOX2-201ENST00000325404 WASHC2CQ9Y4E1 1318 aa26.76■■□□□ 1.87
SOX2-201ENST00000325404 POGZQ7Z3K3 1410 aa26.76■■□□□ 1.87
SOX2-201ENST00000325404 NEO1Q92859 1461 aa26.75■■□□□ 1.87
SOX2-201ENST00000325404 INSRP06213 1382 aa26.75■■□□□ 1.87
SOX2-201ENST00000325404 PARD3Q8TEW0 1356 aa26.75■■□□□ 1.87
SOX2-201ENST00000325404 EIF2AK4Q9P2K8 1649 aaKnown RBP26.74■■□□□ 1.87
SOX2-201ENST00000325404 PRDM15P57071 1507 aaPredicted RBP26.73■■□□□ 1.87
SOX2-201ENST00000325404 A2MP01023 1474 aa26.72■■□□□ 1.87
SOX2-201ENST00000325404 KIDINS220Q9ULH0 1771 aa26.72■■□□□ 1.87
SOX2-201ENST00000325404 DEPDC5O75140 1603 aa26.72■■□□□ 1.87
SOX2-201ENST00000325404 ZMYM4Q5VZL5 1548 aa26.71■■□□□ 1.87
SOX2-201ENST00000325404 NLRP13Q86W25 1043 aa26.71■■□□□ 1.87
SOX2-201ENST00000325404 COL17A1Q9UMD9 1497 aaPredicted RBP26.7■■□□□ 1.86
SOX2-201ENST00000325404 KANK1Q14678 1352 aa26.68■■□□□ 1.86
SOX2-201ENST00000325404 KIF3BO15066 747 aa26.68■■□□□ 1.86
SOX2-201ENST00000325404 GLI2P10070 1586 aa26.68■■□□□ 1.86
SOX2-201ENST00000325404 MLH3Q9UHC1 1453 aa26.67■■□□□ 1.86
SOX2-201ENST00000325404 MAP3K4Q9Y6R4 1608 aa26.67■■□□□ 1.86
SOX2-201ENST00000325404 PDE3BQ13370 1112 aa26.67■■□□□ 1.86
SOX2-201ENST00000325404 PER1O15534 1290 aaPredicted RBP26.67■■□□□ 1.86
SOX2-201ENST00000325404 CNGB1Q14028 1251 aaPredicted RBP26.64■■□□□ 1.86
SOX2-201ENST00000325404 HECW2Q9P2P5 1572 aa26.64■■□□□ 1.86
SOX2-201ENST00000325404 VWDEQ8N2E2 1590 aa26.63■■□□□ 1.85
SOX2-201ENST00000325404 CCDC136Q96JN2 1154 aa26.63■■□□□ 1.85
SOX2-201ENST00000325404 TESK2Q96S53 571 aa26.62■■□□□ 1.85
SOX2-201ENST00000325404 NBPF1Q3BBV0 1214 aa26.61■■□□□ 1.85
SOX2-201ENST00000325404 ERICH6Q7L0X2 663 aa26.61■■□□□ 1.85
SOX2-201ENST00000325404 TET3O43151 1660 aa26.61■■□□□ 1.85
SOX2-201ENST00000325404 MROH1Q8NDA8 1641 aa26.59■■□□□ 1.85
SOX2-201ENST00000325404 RNF17Q9BXT8 1623 aaKnown RBP26.58■■□□□ 1.85
SOX2-201ENST00000325404 FAM69CQ0P6D2 419 aa26.58■■□□□ 1.84
SOX2-201ENST00000325404 RAPGEF3O95398 923 aa26.57■■□□□ 1.84
SOX2-201ENST00000325404 DIP2BQ9P265 1576 aa26.57■■□□□ 1.84
SOX2-201ENST00000325404 RGL3Q3MIN7 710 aa26.57■■□□□ 1.84
SOX2-201ENST00000325404 TRPM2O94759 1503 aa26.55■■□□□ 1.84
SOX2-201ENST00000325404 STAC3Q96MF2 364 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms