RNA–Protein interactions for RNA: ENST00000323871.9

PXN-203, Transcript of paxillin, humanhuman

TSL 2

Gene PXN, Length 5,457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-203ENST00000323871 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.36■■□□□ 1.174e-6■■□□□ 14.5
PXN-203ENST00000323871 SMC4Q9NTJ3 1288 aa22.36■■□□□ 1.17
PXN-203ENST00000323871 PTMSP20962 102 aa22.36■■□□□ 1.17
PXN-203ENST00000323871 EVA1CP58658 441 aa22.36■■□□□ 1.17
PXN-203ENST00000323871 NLRP13Q86W25 1043 aa22.35■■□□□ 1.17
PXN-203ENST00000323871 C1orf141Q5JVX7 400 aa22.34■■□□□ 1.17
PXN-203ENST00000323871 LTV1Q96GA3 475 aaPredicted RBP22.34■■□□□ 1.17
PXN-203ENST00000323871 B4GALNT3Q6L9W6 998 aa22.33■■□□□ 1.17
PXN-203ENST00000323871 PDE3BQ13370 1112 aa22.31■■□□□ 1.16
PXN-203ENST00000323871 KIF15Q9NS87 1388 aa22.31■■□□□ 1.16
PXN-203ENST00000323871 CGNL1Q0VF96 1302 aa22.3■■□□□ 1.16
PXN-203ENST00000323871 FAM69CQ0P6D2 419 aa22.3■■□□□ 1.16
PXN-203ENST00000323871 CCDC34Q96HJ3 373 aa22.3■■□□□ 1.16
PXN-203ENST00000323871 RBM19Q9Y4C8 960 aaKnown RBP22.29■■□□□ 1.16
PXN-203ENST00000323871 NUTM2FA1L443 756 aa22.28■■□□□ 1.16
PXN-203ENST00000323871 FGD5Q6ZNL6 1462 aa22.27■■□□□ 1.15
PXN-203ENST00000323871 CENPJQ9HC77 1338 aaPredicted RBP22.27■■□□□ 1.15
PXN-203ENST00000323871 SLC4A10Q6U841 1118 aa22.26■■□□□ 1.15
PXN-203ENST00000323871 CHAF1AQ13111 956 aaPredicted RBP22.26■■□□□ 1.15
PXN-203ENST00000323871 MEX3CQ5U5Q3 659 aaKnown RBP22.26■■□□□ 1.15
PXN-203ENST00000323871 STAC3Q96MF2 364 aa22.25■■□□□ 1.15
PXN-203ENST00000323871 FRAT2O75474 233 aaPredicted RBP22.25■■□□□ 1.15
PXN-203ENST00000323871 MYOM3Q5VTT5 1437 aa22.24■■□□□ 1.15
PXN-203ENST00000323871 KIAA2012Q0VF49 1180 aa22.24■■□□□ 1.15
PXN-203ENST00000323871 GBP4Q96PP9 640 aa22.22■■□□□ 1.15
PXN-203ENST00000323871 TRIM6-TRIM34B2RNG4 842 aa22.22■■□□□ 1.15
PXN-203ENST00000323871 TTC5Q8N0Z6 440 aa22.22■■□□□ 1.15
PXN-203ENST00000323871 MYBBP1AQ9BQG0 1328 aaKnown RBP22.21■■□□□ 1.15
PXN-203ENST00000323871 HSP90B1P14625 803 aaKnown RBP22.2■■□□□ 1.15
PXN-203ENST00000323871 DRC7Q8IY82 874 aa22.2■■□□□ 1.15
PXN-203ENST00000323871 TEFQ10587 303 aa22.2■■□□□ 1.14
PXN-203ENST00000323871 CUX1P39880 1505 aa22.19■■□□□ 1.14
PXN-203ENST00000323871 PSME1Q06323 249 aa22.19■■□□□ 1.14
PXN-203ENST00000323871 CCDC146Q8IYE0 955 aa22.19■■□□□ 1.14
PXN-203ENST00000323871 CHMP4CQ96CF2 233 aa22.18■■□□□ 1.14
PXN-203ENST00000323871 TCERG1O14776 1098 aaKnown RBP22.18■■□□□ 1.14
PXN-203ENST00000323871 TPM4P67936 248 aa22.17■■□□□ 1.14
PXN-203ENST00000323871 CSPP1Q1MSJ5 1256 aa22.17■■□□□ 1.14
PXN-203ENST00000323871 SYAP1Q96A49 352 aaPredicted RBP22.17■■□□□ 1.14
PXN-203ENST00000323871 TSHZ2Q9NRE2 1034 aa22.17■■□□□ 1.14
PXN-203ENST00000323871 KIF3AQ9Y496 699 aa22.17■■□□□ 1.14
PXN-203ENST00000323871 MINK1Q8N4C8 1332 aaPredicted RBP22.16■■□□□ 1.14
PXN-203ENST00000323871 ATF3P18847 181 aa22.16■■□□□ 1.14
PXN-203ENST00000323871 PANK3Q9H999 370 aa22.16■■□□□ 1.14
PXN-203ENST00000323871 NEXNQ0ZGT2 675 aa22.15■■□□□ 1.14
PXN-203ENST00000323871 LRRFIP1Q32MZ4 808 aaKnown RBP22.15■■□□□ 1.14
PXN-203ENST00000323871 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
PXN-203ENST00000323871 ST20-MTHFSA0A0A6YYL1 179 aa22.14■■□□□ 1.14
PXN-203ENST00000323871 MSH5O43196 834 aa22.13■■□□□ 1.13
PXN-203ENST00000323871 DHX57Q6P158 1386 aaKnown RBP22.13■■□□□ 1.13
PXN-203ENST00000323871 GRIN2BQ13224 1484 aa22.11■■□□□ 1.13
PXN-203ENST00000323871 PRKCSHP14314 528 aaPredicted RBP22.11■■□□□ 1.13
PXN-203ENST00000323871 NOL10Q9BSC4 688 aaKnown RBP22.11■■□□□ 1.13
PXN-203ENST00000323871 AMER1Q5JTC6 1135 aaPredicted RBP22.11■■□□□ 1.13
PXN-203ENST00000323871 IGF1RP08069 1367 aa22.11■■□□□ 1.13
PXN-203ENST00000323871 RAD54L2Q9Y4B4 1467 aa22.11■■□□□ 1.13
PXN-203ENST00000323871 TOMM22Q9NS69 142 aa22.1■■□□□ 1.13
PXN-203ENST00000323871 AMOTL1Q8IY63 956 aa22.1■■□□□ 1.13
PXN-203ENST00000323871 SPRYD3Q8NCJ5 442 aa22.1■■□□□ 1.13
PXN-203ENST00000323871 NGEFQ8N5V2 710 aa22.1■■□□□ 1.13
PXN-203ENST00000323871 MSNP26038 577 aaKnown RBP22.08■■□□□ 1.13
PXN-203ENST00000323871 RASSF8Q8NHQ8 419 aa22.08■■□□□ 1.13
PXN-203ENST00000323871 MIA2Q96PC5 1412 aa22.08■■□□□ 1.13
PXN-203ENST00000323871 E9PSI1 815 aa22.08■■□□□ 1.12
PXN-203ENST00000323871 DIAPH1O60610 1272 aaKnown RBP22.07■■□□□ 1.12
PXN-203ENST00000323871 DDX58O95786 925 aaKnown RBP22.07■■□□□ 1.12
PXN-203ENST00000323871 USP47Q96K76 1375 aa22.06■■□□□ 1.12
PXN-203ENST00000323871 CLUAP1Q96AJ1 413 aa22.06■■□□□ 1.12
PXN-203ENST00000323871 PRDM2Q13029 1718 aa22.05■■□□□ 1.12
PXN-203ENST00000323871 MARCH6O60337 910 aa22.05■■□□□ 1.12
PXN-203ENST00000323871 MFAP1P55081 439 aaKnown RBP22.05■■□□□ 1.12
PXN-203ENST00000323871 KIF16BQ96L93 1317 aa22.04■■□□□ 1.12
PXN-203ENST00000323871 AQRO60306 1485 aaKnown RBP eCLIP22.04■■□□□ 1.123e-6■■■□□ 18.5
PXN-203ENST00000323871 TRIM34Q9BYJ4 488 aa22.04■■□□□ 1.12
PXN-203ENST00000323871 SYNJ2O15056 1496 aa22.03■■□□□ 1.12
PXN-203ENST00000323871 ST18O60284 1047 aa22.03■■□□□ 1.12
PXN-203ENST00000323871 ZKSCAN2Q63HK3 967 aa22.03■■□□□ 1.12
PXN-203ENST00000323871 MRC2Q9UBG0 1479 aa22.02■■□□□ 1.12
PXN-203ENST00000323871 ARHGAP5Q13017 1502 aa22.01■■□□□ 1.11
PXN-203ENST00000323871 RAPGEF4Q8WZA2 1011 aa22.01■■□□□ 1.11
PXN-203ENST00000323871 RRP7AQ9Y3A4 280 aaKnown RBP22.01■■□□□ 1.11
PXN-203ENST00000323871 ROCK1Q13464 1354 aa22.01■■□□□ 1.11
PXN-203ENST00000323871 NCBP3Q53F19 620 aaKnown RBP22■■□□□ 1.11
PXN-203ENST00000323871 C9orf78Q9NZ63 289 aaPredicted RBP22■■□□□ 1.11
PXN-203ENST00000323871 WASHC2AQ641Q2 1341 aa21.99■■□□□ 1.11
PXN-203ENST00000323871 IFT140Q96RY7 1462 aa21.99■■□□□ 1.11
PXN-203ENST00000323871 VPS53Q5VIR6 699 aa21.99■■□□□ 1.11
PXN-203ENST00000323871 FYCO1Q9BQS8 1478 aa21.98■■□□□ 1.11
PXN-203ENST00000323871 AKAP17AQ02040 695 aaKnown RBP21.98■■□□□ 1.11
PXN-203ENST00000323871 SYNE3Q6ZMZ3 975 aa21.98■■□□□ 1.11
PXN-203ENST00000323871 SYTL4Q96C24 671 aaPredicted RBP21.98■■□□□ 1.11
PXN-203ENST00000323871 API5Q9BZZ5 524 aaKnown RBP21.97■■□□□ 1.11
PXN-203ENST00000323871 FGD6Q6ZV73 1430 aa21.97■■□□□ 1.11
PXN-203ENST00000323871 VSIG10Q8N0Z9 540 aa21.97■■□□□ 1.11
PXN-203ENST00000323871 CTDP1Q9Y5B0 961 aaPredicted RBP21.97■■□□□ 1.11
PXN-203ENST00000323871 GPRASP1Q5JY77 1395 aa21.97■■□□□ 1.11
PXN-203ENST00000323871 RUSC2Q8N2Y8 1516 aa21.96■■□□□ 1.11
PXN-203ENST00000323871 RUFY2Q8WXA3 655 aa21.96■■□□□ 1.11
PXN-203ENST00000323871 EIF2S2P20042 333 aaKnown RBP21.96■■□□□ 1.11
PXN-203ENST00000323871 PLEKHH2Q8IVE3 1493 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms