RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ABCC5O15440 1437 aa16.37■□□□□ 0.21
DNMT3A-202ENST00000321117 SNAPC4Q5SXM2 1469 aa16.36■□□□□ 0.21
DNMT3A-202ENST00000321117 UGGT2Q9NYU1 1516 aa16.36■□□□□ 0.21
DNMT3A-202ENST00000321117 PRG4Q92954 1404 aaPredicted RBP16.34■□□□□ 0.21
DNMT3A-202ENST00000321117 L1TD1Q5T7N2 865 aaKnown RBP16.33■□□□□ 0.21
DNMT3A-202ENST00000321117 THOC2Q8NI27 1593 aaKnown RBP16.33■□□□□ 0.2
DNMT3A-202ENST00000321117 NFKBIBQ15653 356 aa16.33■□□□□ 0.2
DNMT3A-202ENST00000321117 MORC1Q86VD1 984 aa16.33■□□□□ 0.2
DNMT3A-202ENST00000321117 TROQ12816 1431 aaPredicted RBP16.33■□□□□ 0.2
DNMT3A-202ENST00000321117 ADAMTS8Q9UP79 889 aa16.31■□□□□ 0.2
DNMT3A-202ENST00000321117 CENPJQ9HC77 1338 aaPredicted RBP16.31■□□□□ 0.2
DNMT3A-202ENST00000321117 IL27Q8NEV9 243 aa16.31■□□□□ 0.2
DNMT3A-202ENST00000321117 NBPF1Q3BBV0 1214 aa16.31■□□□□ 0.2
DNMT3A-202ENST00000321117 TRIM44Q96DX7 344 aaPredicted RBP16.31■□□□□ 0.2
DNMT3A-202ENST00000321117 IQGAP2Q13576 1575 aa16.31■□□□□ 0.2
DNMT3A-202ENST00000321117 SPRYD3Q8NCJ5 442 aa16.31■□□□□ 0.2
DNMT3A-202ENST00000321117 WASHC2CQ9Y4E1 1318 aa16.3■□□□□ 0.2
DNMT3A-202ENST00000321117 CTTNBP2Q8WZ74 1663 aa16.3■□□□□ 0.2
DNMT3A-202ENST00000321117 APAF1O14727 1248 aa16.3■□□□□ 0.2
DNMT3A-202ENST00000321117 PMFBP1Q8TBY8 1022 aa16.28■□□□□ 0.2
DNMT3A-202ENST00000321117 EIF3AQ14152 1382 aaKnown RBP16.28■□□□□ 0.2
DNMT3A-202ENST00000321117 KANK1Q14678 1352 aa16.28■□□□□ 0.2
DNMT3A-202ENST00000321117 E9PSI1 815 aa16.28■□□□□ 0.2
DNMT3A-202ENST00000321117 C9orf84Q5VXU9 1444 aa16.27■□□□□ 0.2
DNMT3A-202ENST00000321117 MAPK8IP3Q9UPT6 1336 aa16.27■□□□□ 0.2
DNMT3A-202ENST00000321117 EFCAB2Q5VUJ9 269 aa16.27■□□□□ 0.2
DNMT3A-202ENST00000321117 RWDD1Q9H446 243 aaPredicted RBP16.27■□□□□ 0.2
DNMT3A-202ENST00000321117 NAP1L5Q96NT1 182 aaPredicted RBP16.27■□□□□ 0.2
DNMT3A-202ENST00000321117 TCOF1Q13428 1488 aaKnown RBP16.27■□□□□ 0.19
DNMT3A-202ENST00000321117 CGNL1Q0VF96 1302 aa16.27■□□□□ 0.19
DNMT3A-202ENST00000321117 MYH16Q9H6N6 1097 aa16.26■□□□□ 0.19
DNMT3A-202ENST00000321117 URB2Q14146 1524 aaKnown RBP16.26■□□□□ 0.19
DNMT3A-202ENST00000321117 U2SURPO15042 1029 aaKnown RBP16.25■□□□□ 0.19
DNMT3A-202ENST00000321117 HSCBQ8IWL3 235 aa16.25■□□□□ 0.19
DNMT3A-202ENST00000321117 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
DNMT3A-202ENST00000321117 GOLGA6L22H0YM25 854 aa16.25■□□□□ 0.19
DNMT3A-202ENST00000321117 CLUAP1Q96AJ1 413 aa16.25■□□□□ 0.19
DNMT3A-202ENST00000321117 COG6Q9Y2V7 657 aa16.24■□□□□ 0.19
DNMT3A-202ENST00000321117 CAMSAP2Q08AD1 1489 aa16.23■□□□□ 0.19
DNMT3A-202ENST00000321117 GZF1Q9H116 711 aaPredicted RBP16.23■□□□□ 0.19
DNMT3A-202ENST00000321117 HSP90AB1P08238 724 aaKnown RBP16.22■□□□□ 0.19
DNMT3A-202ENST00000321117 PPP2R1AP30153 589 aa16.22■□□□□ 0.19
DNMT3A-202ENST00000321117 BRPF3Q9ULD4 1205 aa16.22■□□□□ 0.19
DNMT3A-202ENST00000321117 SKAP1Q86WV1 359 aa16.21■□□□□ 0.19
DNMT3A-202ENST00000321117 STAG3Q9UJ98 1225 aa16.21■□□□□ 0.19
DNMT3A-202ENST00000321117 DHX29Q7Z478 1369 aaKnown RBP16.21■□□□□ 0.19
DNMT3A-202ENST00000321117 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
DNMT3A-202ENST00000321117 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.19
DNMT3A-202ENST00000321117 PTPRGP23470 1445 aa16.21■□□□□ 0.19
DNMT3A-202ENST00000321117 NPM1P06748 294 aaKnown RBP eCLIP16.21■□□□□ 0.18
DNMT3A-202ENST00000321117 ANO8Q9HCE9 1232 aaPredicted RBP16.2■□□□□ 0.18
DNMT3A-202ENST00000321117 RRP7AQ9Y3A4 280 aaKnown RBP16.2■□□□□ 0.18
DNMT3A-202ENST00000321117 KIAA0586Q9BVV6 1533 aa16.2■□□□□ 0.18
DNMT3A-202ENST00000321117 LAMC3Q9Y6N6 1575 aa16.2■□□□□ 0.18
DNMT3A-202ENST00000321117 NGEFQ8N5V2 710 aa16.19■□□□□ 0.18
DNMT3A-202ENST00000321117 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
DNMT3A-202ENST00000321117 MFAP1P55081 439 aaKnown RBP16.18■□□□□ 0.18
DNMT3A-202ENST00000321117 BCL2L13Q9BXK5 485 aa16.18■□□□□ 0.18
DNMT3A-202ENST00000321117 FRAT2O75474 233 aaPredicted RBP16.18■□□□□ 0.18
DNMT3A-202ENST00000321117 GOLGA6L3A6NEY3 463 aa16.18■□□□□ 0.18
DNMT3A-202ENST00000321117 KIF3BO15066 747 aa16.16■□□□□ 0.18
DNMT3A-202ENST00000321117 C20orf194Q5TEA3 1177 aa16.16■□□□□ 0.18
DNMT3A-202ENST00000321117 RNF123Q5XPI4 1314 aa16.16■□□□□ 0.18
DNMT3A-202ENST00000321117 ERBINQ96RT1 1412 aa16.16■□□□□ 0.18
DNMT3A-202ENST00000321117 ITPRIPQ8IWB1 547 aa16.16■□□□□ 0.18
DNMT3A-202ENST00000321117 TEX14Q8IWB6 1497 aa16.16■□□□□ 0.18
DNMT3A-202ENST00000321117 NCLP19338 710 aaKnown RBP16.16■□□□□ 0.18
DNMT3A-202ENST00000321117 SMC4Q9NTJ3 1288 aa16.15■□□□□ 0.18
DNMT3A-202ENST00000321117 PNNQ9H307 717 aaKnown RBP16.15■□□□□ 0.18
DNMT3A-202ENST00000321117 PANK1Q8TE04 598 aa16.14■□□□□ 0.17
DNMT3A-202ENST00000321117 CHMP4BQ9H444 224 aaKnown RBP16.14■□□□□ 0.17
DNMT3A-202ENST00000321117 RALGAPBQ86X10 1494 aa16.13■□□□□ 0.17
DNMT3A-202ENST00000321117 RSPH6AQ9H0K4 717 aa16.13■□□□□ 0.17
DNMT3A-202ENST00000321117 IPO8O15397 1037 aaKnown RBP16.12■□□□□ 0.17
DNMT3A-202ENST00000321117 MRC2Q9UBG0 1479 aa16.12■□□□□ 0.17
DNMT3A-202ENST00000321117 BCAR3O75815 825 aa16.12■□□□□ 0.17
DNMT3A-202ENST00000321117 SAFB2Q14151 953 aaKnown RBP eCLIP16.12■□□□□ 0.17
DNMT3A-202ENST00000321117 PLB1Q6P1J6 1458 aa16.12■□□□□ 0.17
DNMT3A-202ENST00000321117 IFT140Q96RY7 1462 aa16.11■□□□□ 0.17
DNMT3A-202ENST00000321117 SPATA31E1Q6ZUB1 1445 aa16.11■□□□□ 0.17
DNMT3A-202ENST00000321117 SRPK2P78362 688 aaKnown RBP16.11■□□□□ 0.17
DNMT3A-202ENST00000321117 STAC3Q96MF2 364 aa16.11■□□□□ 0.17
DNMT3A-202ENST00000321117 SAMD9Q5K651 1589 aa16.1■□□□□ 0.17
DNMT3A-202ENST00000321117 TRAK1Q9UPV9 953 aa16.1■□□□□ 0.17
DNMT3A-202ENST00000321117 GBP4Q96PP9 640 aa16.1■□□□□ 0.17
DNMT3A-202ENST00000321117 GCC2Q8IWJ2 1684 aa16.1■□□□□ 0.17
DNMT3A-202ENST00000321117 POGKQ9P215 609 aa16.1■□□□□ 0.17
DNMT3A-202ENST00000321117 GPATCH8Q9UKJ3 1502 aaKnown RBP16.09■□□□□ 0.17
DNMT3A-202ENST00000321117 PDE3AQ14432 1141 aa16.09■□□□□ 0.17
DNMT3A-202ENST00000321117 PLEKHH2Q8IVE3 1493 aa16.09■□□□□ 0.17
DNMT3A-202ENST00000321117 MAGI3Q5TCQ9 1506 aa16.09■□□□□ 0.17
DNMT3A-202ENST00000321117 ZKSCAN2Q63HK3 967 aa16.08■□□□□ 0.17
DNMT3A-202ENST00000321117 SYNJ2O15056 1496 aa16.08■□□□□ 0.16
DNMT3A-202ENST00000321117 SLFN5Q08AF3 891 aa16.08■□□□□ 0.16
DNMT3A-202ENST00000321117 PZPP20742 1482 aa16.08■□□□□ 0.16
DNMT3A-202ENST00000321117 LRPPRCP42704 1394 aaKnown RBP16.08■□□□□ 0.16
DNMT3A-202ENST00000321117 ARHGEF11O15085 1522 aa16.07■□□□□ 0.16
DNMT3A-202ENST00000321117 PARD3Q8TEW0 1356 aa16.07■□□□□ 0.16
DNMT3A-202ENST00000321117 GGT6Q6P531 493 aa16.07■□□□□ 0.16
DNMT3A-202ENST00000321117 RUNDC1Q96C34 613 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms