RNA–Protein interactions for RNA: ENST00000320122.10

LMO3-202, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-202ENST00000320122 SHANK2Q9UPX8 1470 aa8.46□□□□□ -1.06
LMO3-202ENST00000320122 NGEFQ8N5V2 710 aa8.46□□□□□ -1.06
LMO3-202ENST00000320122 ADAMTS12P58397 1594 aa8.45□□□□□ -1.06
LMO3-202ENST00000320122 NUP155O75694 1391 aa8.45□□□□□ -1.06
LMO3-202ENST00000320122 BACH2Q9BYV9 841 aa8.45□□□□□ -1.06
LMO3-202ENST00000320122 CAMSAP2Q08AD1 1489 aa8.45□□□□□ -1.06
LMO3-202ENST00000320122 PZPP20742 1482 aa8.45□□□□□ -1.06
LMO3-202ENST00000320122 EIF3AQ14152 1382 aaKnown RBP8.44□□□□□ -1.06
LMO3-202ENST00000320122 LRRIQ1Q96JM4 1722 aa8.44□□□□□ -1.06
LMO3-202ENST00000320122 PAK3O75914 559 aaPredicted RBP8.44□□□□□ -1.06
LMO3-202ENST00000320122 CENPQQ7L2Z9 268 aaPredicted RBP8.44□□□□□ -1.06
LMO3-202ENST00000320122 ZNF777Q9ULD5 760 aaPredicted RBP8.44□□□□□ -1.06
LMO3-202ENST00000320122 RAPGEF6Q8TEU7 1601 aa8.44□□□□□ -1.06
LMO3-202ENST00000320122 IFT140Q96RY7 1462 aa8.43□□□□□ -1.06
LMO3-202ENST00000320122 STAC3Q96MF2 364 aa8.43□□□□□ -1.06
LMO3-202ENST00000320122 TMF1P82094 1093 aa8.43□□□□□ -1.06
LMO3-202ENST00000320122 WDR43Q15061 677 aaKnown RBP eCLIP8.43□□□□□ -1.06
LMO3-202ENST00000320122 KDM5CP41229 1560 aa8.43□□□□□ -1.06
LMO3-202ENST00000320122 CNGB1Q14028 1251 aaPredicted RBP8.42□□□□□ -1.06
LMO3-202ENST00000320122 BECN1Q14457 450 aa8.42□□□□□ -1.06
LMO3-202ENST00000320122 KDM6BO15054 1643 aa8.42□□□□□ -1.06
LMO3-202ENST00000320122 PBRM1Q86U86 1689 aa8.42□□□□□ -1.06
LMO3-202ENST00000320122 EXOC6Q8TAG9 804 aa8.42□□□□□ -1.06
LMO3-202ENST00000320122 KIAA0556O60303 1618 aa8.42□□□□□ -1.06
LMO3-202ENST00000320122 MRC2Q9UBG0 1479 aa8.41□□□□□ -1.06
LMO3-202ENST00000320122 TARBP1Q13395 1621 aaKnown RBP8.41□□□□□ -1.06
LMO3-202ENST00000320122 ST20-MTHFSA0A0A6YYL1 179 aa8.41□□□□□ -1.06
LMO3-202ENST00000320122 KDM5DQ9BY66 1539 aa8.4□□□□□ -1.06
LMO3-202ENST00000320122 AAMPQ13685 434 aa8.4□□□□□ -1.06
LMO3-202ENST00000320122 DCAF11Q8TEB1 546 aa8.4□□□□□ -1.06
LMO3-202ENST00000320122 PARD3Q8TEW0 1356 aa8.4□□□□□ -1.06
LMO3-202ENST00000320122 CCDC144AA2RUR9 1427 aa8.4□□□□□ -1.06
LMO3-202ENST00000320122 NUP153P49790 1475 aaKnown RBP8.4□□□□□ -1.06
LMO3-202ENST00000320122 C9orf84Q5VXU9 1444 aa8.4□□□□□ -1.07
LMO3-202ENST00000320122 GPATCH8Q9UKJ3 1502 aaKnown RBP8.4□□□□□ -1.07
LMO3-202ENST00000320122 GSE1Q14687 1217 aa8.39□□□□□ -1.07
LMO3-202ENST00000320122 FAM161AQ3B820 660 aa8.39□□□□□ -1.07
LMO3-202ENST00000320122 UPF2Q9HAU5 1272 aaKnown RBP8.39□□□□□ -1.07
LMO3-202ENST00000320122 KDM2AQ9Y2K7 1162 aa8.39□□□□□ -1.07
LMO3-202ENST00000320122 NUP160Q12769 1436 aa8.39□□□□□ -1.07
LMO3-202ENST00000320122 LAS1LQ9Y4W2 734 aaKnown RBP8.38□□□□□ -1.07
LMO3-202ENST00000320122 NINLQ9Y2I6 1382 aa8.38□□□□□ -1.07
LMO3-202ENST00000320122 KNSTRNQ9Y448 316 aa8.38□□□□□ -1.07
LMO3-202ENST00000320122 ADCY10Q96PN6 1610 aa8.38□□□□□ -1.07
LMO3-202ENST00000320122 EIF2AK4Q9P2K8 1649 aaKnown RBP8.38□□□□□ -1.07
LMO3-202ENST00000320122 PODXL2Q9NZ53 605 aa8.37□□□□□ -1.07
LMO3-202ENST00000320122 ZNF644Q9H582 1327 aaPredicted RBP8.37□□□□□ -1.07
LMO3-202ENST00000320122 L1TD1Q5T7N2 865 aaKnown RBP8.37□□□□□ -1.07
LMO3-202ENST00000320122 GOLGA2Q08379 1002 aa8.36□□□□□ -1.07
LMO3-202ENST00000320122 MAPK8IP3Q9UPT6 1336 aa8.36□□□□□ -1.07
LMO3-202ENST00000320122 GPRASP1Q5JY77 1395 aa8.36□□□□□ -1.07
LMO3-202ENST00000320122 BLMP54132 1417 aaPredicted RBP8.36□□□□□ -1.07
LMO3-202ENST00000320122 GRIN2AQ12879 1464 aa8.36□□□□□ -1.07
LMO3-202ENST00000320122 MAGI1Q96QZ7 1491 aaPredicted RBP8.36□□□□□ -1.07
LMO3-202ENST00000320122 CROCC2H7BZ55 1655 aa8.35□□□□□ -1.07
LMO3-202ENST00000320122 DISP1Q96F81 1524 aa8.35□□□□□ -1.07
LMO3-202ENST00000320122 PRG4Q92954 1404 aaPredicted RBP8.35□□□□□ -1.07
LMO3-202ENST00000320122 CRBNQ96SW2 442 aa8.35□□□□□ -1.07
LMO3-202ENST00000320122 ARHGEF5Q12774 1597 aa8.34□□□□□ -1.07
LMO3-202ENST00000320122 PTPRGP23470 1445 aa8.34□□□□□ -1.07
LMO3-202ENST00000320122 BCORL1Q5H9F3 1711 aa8.34□□□□□ -1.07
LMO3-202ENST00000320122 LAMC1P11047 1609 aa8.34□□□□□ -1.07
LMO3-202ENST00000320122 CGNL1Q0VF96 1302 aa8.34□□□□□ -1.07
LMO3-202ENST00000320122 CEP170Q5SW79 1584 aa8.34□□□□□ -1.07
LMO3-202ENST00000320122 CCDC141Q6ZP82 1450 aa8.34□□□□□ -1.07
LMO3-202ENST00000320122 RSPH6AQ9H0K4 717 aa8.34□□□□□ -1.08
LMO3-202ENST00000320122 SALL2Q9Y467 1007 aaPredicted RBP8.34□□□□□ -1.08
LMO3-202ENST00000320122 COL17A1Q9UMD9 1497 aaPredicted RBP8.33□□□□□ -1.08
LMO3-202ENST00000320122 PRAG1Q86YV5 1406 aa8.33□□□□□ -1.08
LMO3-202ENST00000320122 ERBINQ96RT1 1412 aa8.33□□□□□ -1.08
LMO3-202ENST00000320122 CANXP27824 592 aaKnown RBP8.33□□□□□ -1.08
LMO3-202ENST00000320122 ANO8Q9HCE9 1232 aaPredicted RBP8.33□□□□□ -1.08
LMO3-202ENST00000320122 RTN4Q9NQC3 1192 aaKnown RBP8.33□□□□□ -1.08
LMO3-202ENST00000320122 SCAPERQ9BY12 1400 aa8.33□□□□□ -1.08
LMO3-202ENST00000320122 NFKBIBQ15653 356 aa8.33□□□□□ -1.08
LMO3-202ENST00000320122 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.32□□□□□ -1.08
LMO3-202ENST00000320122 SYNJ2O15056 1496 aa8.32□□□□□ -1.08
LMO3-202ENST00000320122 E9PSI1 815 aa8.31□□□□□ -1.08
LMO3-202ENST00000320122 PANK3Q9H999 370 aa8.31□□□□□ -1.08
LMO3-202ENST00000320122 CC2D1BQ5T0F9 858 aaKnown RBP8.31□□□□□ -1.08
LMO3-202ENST00000320122 NPC1L1Q9UHC9 1359 aa8.31□□□□□ -1.08
LMO3-202ENST00000320122 PMFBP1Q8TBY8 1022 aa8.31□□□□□ -1.08
LMO3-202ENST00000320122 E9PCH4 1651 aa8.3□□□□□ -1.08
LMO3-202ENST00000320122 ZMYM3Q14202 1370 aa8.3□□□□□ -1.08
LMO3-202ENST00000320122 JPH4Q96JJ6 628 aa8.3□□□□□ -1.08
LMO3-202ENST00000320122 PKNOX2Q96KN3 472 aa8.3□□□□□ -1.08
LMO3-202ENST00000320122 EIF4G3O43432 1585 aaKnown RBP8.3□□□□□ -1.08
LMO3-202ENST00000320122 PDE3AQ14432 1141 aa8.3□□□□□ -1.08
LMO3-202ENST00000320122 FAM43AQ8N2R8 423 aa8.3□□□□□ -1.08
LMO3-202ENST00000320122 PER1O15534 1290 aaPredicted RBP8.29□□□□□ -1.08
LMO3-202ENST00000320122 FAM135AQ9P2D6 1515 aa8.29□□□□□ -1.08
LMO3-202ENST00000320122 PTMSP20962 102 aa8.29□□□□□ -1.08
LMO3-202ENST00000320122 PIK3C2GO75747 1445 aa8.28□□□□□ -1.08
LMO3-202ENST00000320122 KDM2BQ8NHM5 1336 aa8.28□□□□□ -1.08
LMO3-202ENST00000320122 RGL3Q3MIN7 710 aa8.28□□□□□ -1.08
LMO3-202ENST00000320122 FAM69CQ0P6D2 419 aa8.27□□□□□ -1.08
LMO3-202ENST00000320122 ABCC10Q5T3U5 1492 aa8.27□□□□□ -1.08
LMO3-202ENST00000320122 CLASP1Q7Z460 1538 aa8.27□□□□□ -1.08
LMO3-202ENST00000320122 CDCA7LQ96GN5 454 aa8.27□□□□□ -1.09
LMO3-202ENST00000320122 PRDM15P57071 1507 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms