RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ARAP3Q8WWN8 1544 aa10.57□□□□□ -0.72
IFT88-201ENST00000319980 KDM5DQ9BY66 1539 aa10.57□□□□□ -0.72
IFT88-201ENST00000319980 TRAPPC8Q9Y2L5 1435 aa10.57□□□□□ -0.72
IFT88-201ENST00000319980 CCER2I3L3R5 266 aa10.57□□□□□ -0.72
IFT88-201ENST00000319980 DCAF11Q8TEB1 546 aa10.56□□□□□ -0.72
IFT88-201ENST00000319980 FAM135AQ9P2D6 1515 aa10.56□□□□□ -0.72
IFT88-201ENST00000319980 SPAG9O60271 1321 aaKnown RBP10.56□□□□□ -0.72
IFT88-201ENST00000319980 MAST1Q9Y2H9 1570 aa10.55□□□□□ -0.72
IFT88-201ENST00000319980 SPATA31E1Q6ZUB1 1445 aa10.55□□□□□ -0.72
IFT88-201ENST00000319980 CCDC7Q96M83 1385 aa10.54□□□□□ -0.72
IFT88-201ENST00000319980 RGL3Q3MIN7 710 aa10.54□□□□□ -0.72
IFT88-201ENST00000319980 MYT1LQ9UL68 1186 aa10.54□□□□□ -0.72
IFT88-201ENST00000319980 CFAP74Q9C0B2 1584 aa10.54□□□□□ -0.72
IFT88-201ENST00000319980 CCDC144AA2RUR9 1427 aa10.53□□□□□ -0.72
IFT88-201ENST00000319980 ABCC1P33527 1531 aa10.53□□□□□ -0.72
IFT88-201ENST00000319980 KIF7Q2M1P5 1343 aa10.53□□□□□ -0.72
IFT88-201ENST00000319980 DUOX2Q9NRD8 1548 aa10.52□□□□□ -0.72
IFT88-201ENST00000319980 CARD11Q9BXL7 1154 aa10.52□□□□□ -0.72
IFT88-201ENST00000319980 USP47Q96K76 1375 aa10.52□□□□□ -0.72
IFT88-201ENST00000319980 FANCAO15360 1455 aa10.52□□□□□ -0.73
IFT88-201ENST00000319980 ERBINQ96RT1 1412 aa10.52□□□□□ -0.73
IFT88-201ENST00000319980 PLXNC1O60486 1568 aa10.52□□□□□ -0.73
IFT88-201ENST00000319980 NEO1Q92859 1461 aa10.52□□□□□ -0.73
IFT88-201ENST00000319980 POLR3GLQ9BT43 218 aa10.51□□□□□ -0.73
IFT88-201ENST00000319980 UHRF1BP1Q6BDS2 1440 aa10.5□□□□□ -0.73
IFT88-201ENST00000319980 CNTLNQ9NXG0 1405 aa10.5□□□□□ -0.73
IFT88-201ENST00000319980 DAXXQ9UER7 740 aaPredicted RBP10.5□□□□□ -0.73
IFT88-201ENST00000319980 PLA2R1Q13018 1463 aa10.5□□□□□ -0.73
IFT88-201ENST00000319980 COL17A1Q9UMD9 1497 aaPredicted RBP10.5□□□□□ -0.73
IFT88-201ENST00000319980 SCAPERQ9BY12 1400 aa10.5□□□□□ -0.73
IFT88-201ENST00000319980 RTEL1-TNFRSF6BF6WH68 1400 aa10.49□□□□□ -0.73
IFT88-201ENST00000319980 UNC13BO14795 1591 aa10.49□□□□□ -0.73
IFT88-201ENST00000319980 ADGRL1O94910 1474 aa10.48□□□□□ -0.73
IFT88-201ENST00000319980 FRMPD1Q5SYB0 1578 aa10.48□□□□□ -0.73
IFT88-201ENST00000319980 RALGAPBQ86X10 1494 aa10.47□□□□□ -0.73
IFT88-201ENST00000319980 ST20-MTHFSA0A0A6YYL1 179 aa10.47□□□□□ -0.73
IFT88-201ENST00000319980 KIF3BO15066 747 aa10.47□□□□□ -0.73
IFT88-201ENST00000319980 PRKRIP1Q9H875 184 aaPredicted RBP10.47□□□□□ -0.73
IFT88-201ENST00000319980 ROCK2O75116 1388 aaKnown RBP10.47□□□□□ -0.73
IFT88-201ENST00000319980 CD109Q6YHK3 1445 aa10.47□□□□□ -0.73
IFT88-201ENST00000319980 ZMYM4Q5VZL5 1548 aa10.47□□□□□ -0.73
IFT88-201ENST00000319980 RICTORQ6R327 1708 aa10.46□□□□□ -0.73
IFT88-201ENST00000319980 ZFYVE16Q7Z3T8 1539 aa10.46□□□□□ -0.74
IFT88-201ENST00000319980 MAGI2Q86UL8 1455 aa10.46□□□□□ -0.74
IFT88-201ENST00000319980 CNGB1Q14028 1251 aaPredicted RBP10.46□□□□□ -0.74
IFT88-201ENST00000319980 IQGAP3Q86VI3 1631 aa10.46□□□□□ -0.74
IFT88-201ENST00000319980 NBPF1Q3BBV0 1214 aa10.45□□□□□ -0.74
IFT88-201ENST00000319980 CCDC184Q52MB2 194 aa10.45□□□□□ -0.74
IFT88-201ENST00000319980 PRKCSHP14314 528 aaPredicted RBP10.44□□□□□ -0.74
IFT88-201ENST00000319980 PRAG1Q86YV5 1406 aa10.44□□□□□ -0.74
IFT88-201ENST00000319980 ADAMTSL3P82987 1691 aa10.43□□□□□ -0.74
IFT88-201ENST00000319980 KDM5CP41229 1560 aa10.43□□□□□ -0.74
IFT88-201ENST00000319980 ATP7AQ04656 1500 aa10.43□□□□□ -0.74
IFT88-201ENST00000319980 ATP10AO60312 1499 aa10.43□□□□□ -0.74
IFT88-201ENST00000319980 A2MP01023 1474 aa10.43□□□□□ -0.74
IFT88-201ENST00000319980 DHX29Q7Z478 1369 aaKnown RBP10.43□□□□□ -0.74
IFT88-201ENST00000319980 ARID4BQ4LE39 1312 aaPredicted RBP10.43□□□□□ -0.74
IFT88-201ENST00000319980 ADRA2BP18089 450 aa10.42□□□□□ -0.74
IFT88-201ENST00000319980 HNRNPUQ00839 825 aaKnown RBP eCLIP10.42□□□□□ -0.74
IFT88-201ENST00000319980 KANK1Q14678 1352 aa10.42□□□□□ -0.74
IFT88-201ENST00000319980 MRS2Q9HD23 443 aa10.42□□□□□ -0.74
IFT88-201ENST00000319980 SUPT16HQ9Y5B9 1047 aaKnown RBP10.41□□□□□ -0.74
IFT88-201ENST00000319980 ARHGEF40Q8TER5 1519 aa10.41□□□□□ -0.74
IFT88-201ENST00000319980 BCORL1Q5H9F3 1711 aa10.41□□□□□ -0.74
IFT88-201ENST00000319980 FAM9BQ8IZU0 186 aa10.4□□□□□ -0.74
IFT88-201ENST00000319980 ZNF518AQ6AHZ1 1483 aa10.4□□□□□ -0.74
IFT88-201ENST00000319980 INO80Q9ULG1 1556 aaPredicted RBP10.4□□□□□ -0.75
IFT88-201ENST00000319980 KDM4FA0A1W2PPD8 638 aa10.39□□□□□ -0.75
IFT88-201ENST00000319980 REREQ9P2R6 1566 aa10.39□□□□□ -0.75
IFT88-201ENST00000319980 RAPGEF3O95398 923 aa10.38□□□□□ -0.75
IFT88-201ENST00000319980 GGT6Q6P531 493 aa10.37□□□□□ -0.75
IFT88-201ENST00000319980 GPRASP1Q5JY77 1395 aa10.37□□□□□ -0.75
IFT88-201ENST00000319980 PTPRTO14522 1441 aa10.37□□□□□ -0.75
IFT88-201ENST00000319980 E9PCH4 1651 aa10.36□□□□□ -0.75
IFT88-201ENST00000319980 POGZQ7Z3K3 1410 aa10.36□□□□□ -0.75
IFT88-201ENST00000319980 POLR1AO95602 1720 aaPredicted RBP10.36□□□□□ -0.75
IFT88-201ENST00000319980 TRPM1Q7Z4N2 1603 aa10.36□□□□□ -0.75
IFT88-201ENST00000319980 TESK2Q96S53 571 aa10.35□□□□□ -0.75
IFT88-201ENST00000319980 DEPDC5O75140 1603 aa10.35□□□□□ -0.75
IFT88-201ENST00000319980 TRPM2O94759 1503 aa10.35□□□□□ -0.75
IFT88-201ENST00000319980 FKBP8Q14318 412 aa10.35□□□□□ -0.75
IFT88-201ENST00000319980 KIDINS220Q9ULH0 1771 aa10.34□□□□□ -0.75
IFT88-201ENST00000319980 VWDEQ8N2E2 1590 aa10.33□□□□□ -0.75
IFT88-201ENST00000319980 STAC3Q96MF2 364 aa10.33□□□□□ -0.76
IFT88-201ENST00000319980 PRDM15P57071 1507 aaPredicted RBP10.33□□□□□ -0.76
IFT88-201ENST00000319980 MLH3Q9UHC1 1453 aa10.33□□□□□ -0.76
IFT88-201ENST00000319980 TET3O43151 1660 aa10.33□□□□□ -0.76
IFT88-201ENST00000319980 TMF1P82094 1093 aa10.32□□□□□ -0.76
IFT88-201ENST00000319980 WASHC2CQ9Y4E1 1318 aa10.32□□□□□ -0.76
IFT88-201ENST00000319980 NEFLP07196 543 aa10.32□□□□□ -0.76
IFT88-201ENST00000319980 DISP3Q9P2K9 1392 aa10.32□□□□□ -0.76
IFT88-201ENST00000319980 MROH1Q8NDA8 1641 aa10.32□□□□□ -0.76
IFT88-201ENST00000319980 CHGAP10645 457 aaKnown RBP10.32□□□□□ -0.76
IFT88-201ENST00000319980 TMC1Q8TDI8 760 aa10.32□□□□□ -0.76
IFT88-201ENST00000319980 BCANQ96GW7 911 aa10.32□□□□□ -0.76
IFT88-201ENST00000319980 CLTCL1P53675 1640 aa10.31□□□□□ -0.76
IFT88-201ENST00000319980 EIF2AK4Q9P2K8 1649 aaKnown RBP10.31□□□□□ -0.76
IFT88-201ENST00000319980 UGGT1Q9NYU2 1555 aa10.3□□□□□ -0.76
IFT88-201ENST00000319980 SPHKAPQ2M3C7 1700 aa10.3□□□□□ -0.76
IFT88-201ENST00000319980 SIGLEC1Q9BZZ2 1709 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 223 ms